Changeset d982bb for molecuilder/src/parser.cpp
- Timestamp:
- Apr 28, 2008, 11:36:11 AM (17 years ago)
- Children:
- 8efbfc
- Parents:
- 34d37c
- File:
-
- 1 edited
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- Unmodified
- Added
- Removed
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TabularUnified molecuilder/src/parser.cpp ¶
r34d37c rd982bb 43 43 stringstream line; 44 44 45 line << argv[1] << F actorsFile;45 line << argv[1] << FRAGMENTPREFIX << TEFACTORSFILE; 46 46 return FilePresent(line.str().c_str()); 47 47 }; … … 106 106 // count the number of matrices 107 107 MatrixCounter = -1; // we count one too much 108 line << name << F actorsFile;108 line << name << FRAGMENTPREFIX << TEFACTORSFILE; 109 109 input.open(line.str().c_str(), ios::in); 110 110 if (input == NULL) { … … 127 127 FragmentNumber = FixedDigitNumber(MatrixCounter, i); 128 128 if (i != MatrixCounter) 129 line << name << F ragmentPrefix<< FragmentNumber << "/" << prefix << suffix;129 line << name << FRAGMENTPREFIX << FragmentNumber << "/" << prefix << suffix; 130 130 else 131 131 line << name << prefix << suffix; … … 329 329 stringstream line; 330 330 FragmentNumber = FixedDigitNumber(MatrixCounter, i); 331 line << name << F ragmentPrefix<< FragmentNumber << "/" << prefix;331 line << name << FRAGMENTPREFIX << FragmentNumber << "/" << prefix; 332 332 Free((void **)&FragmentNumber, "*FragmentNumber"); 333 333 output.open(line.str().c_str(), ios::out); … … 424 424 cout << "Parsing force indices." << endl; 425 425 Indices = (int **) Malloc(sizeof(int *)*(MatrixCounter+1), "ForceMatrix::ParseIndices: **Indices"); 426 line << name << F orcesFile;426 line << name << FRAGMENTPREFIX << FORCESFILE; 427 427 input.open(line.str().c_str(), ios::in); 428 428 //cout << "Opening " << line.str() << " ... " << input << endl; … … 439 439 Indices[i] = (int *) Malloc(sizeof(int)*RowCounter[i], "ForceMatrix::ParseIndices: *Indices[]"); 440 440 FragmentNumber = FixedDigitNumber(MatrixCounter, i); 441 cout << F ragmentPrefix<< FragmentNumber << "[" << RowCounter[i] << "]:";441 cout << FRAGMENTPREFIX << FragmentNumber << "[" << RowCounter[i] << "]:"; 442 442 Free((void **)&FragmentNumber, "ForceMatrix::ParseIndices: *FragmentNumber"); 443 443 for(int j=0;(j<RowCounter[i]) && (!line.eof());j++) { … … 521 521 cout << "Parsing key sets." << endl; 522 522 KeySets = (int **) Malloc(sizeof(int *)*FragmentCounter, "KeySetsContainer::ParseKeySets: **KeySets"); 523 line << name << KeySetsFile;523 line << name << FRAGMENTPREFIX << KEYSETFILE; 524 524 input.open(line.str().c_str(), ios::in); 525 525 if (input == NULL) { … … 535 535 KeySets[i] = (int *) Malloc(sizeof(int)*AtomCounter[i], "KeySetsContainer::ParseKeySets: *KeySets[]"); 536 536 FragmentNumber = FixedDigitNumber(FragmentCounter, i); 537 cout << F ragmentPrefix<< FragmentNumber << "[" << AtomCounter[i] << "]:";537 cout << FRAGMENTPREFIX << FragmentNumber << "[" << AtomCounter[i] << "]:"; 538 538 Free((void **)&FragmentNumber, "KeySetsContainer::ParseKeySets: *FragmentNumber"); 539 539 input.getline(filename, 1023);
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