Changeset cbb32d for tests/regression/Python/AllActions/moltest.py

Timestamp:

Nov 7, 2011, 12:24:04 PM (13 years ago)

Author:

Frederik Heber <heber@…>

Branches:

Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable

Children:

f27fa7

Parents:

3493da

git-author:

Frederik Heber <heber@…> (10/10/11 14:06:58)

git-committer:

Frederik Heber <heber@…> (11/07/11 12:24:04)

Message:

Small cosmetical changes to moltest.py.

• We now use Popen to call an external process and check on its return code. If an Action fails with an internal Assertion(134), then the command is still considered as available. We are only interested in failures of the python interpreter.
• changed the output a bit. Each Command is now embraced by BEGIN and END, stdout and stderr are given separately but per command.
• removed XFAIL from regression test Python/AllActions.

File:

• tests/regression/Python/AllActions/moltest.py (modified) (2 diffs)

tests/regression/Python/AllActions/moltest.py

@@ -8 +8 @@
 
 import pyMoleCuilder as mol
-import re, os
+import sys, re, subprocess
 
 cmds =  filter(lambda s: s[0] != '_', dir(mol))
@@ -51 +51 @@
     params = ParseParameters(doc)
     
-    print '-------- %s mit %s --------' % (cmd, params)
+    print '--BEGIN-- %s mit %s --------' % (cmd, params)
+   
+    # write command to file
+    output=open("test.py", "w")
+    output.write('import pyMoleCuilder as mol\nparams = %s\nmol.%s(*params)\n' % (params, cmd))
+    output.close()
+    # call python externally on this file and catch retcode
+    p = subprocess.Popen(["python", "test.py"], stdout=subprocess.PIPE, stderr=subprocess.PIPE)
+    stdout, stderr = p.communicate()
+    print ' --- STDOUT ---'
+    print ' %s ' % (stdout)
+    print ' --- STDERR ---'
+    print ' %s ' % (stderr)
+    retcode = p.returncode
+    if retcode == 134 or retcode == 0:
+      print ' ---- ok ----'
+    else:
+      print ' -- FAILED with %s --' % (retcode)
+    #exec('mol.%s(*params)' % cmd)
     
-    exec('mol.%s(*params)' % cmd)
+    print '---END--- %s mit %s --------' % (cmd, params)
+
+sys.exit(0)