Ignore:
Timestamp:
May 19, 2010, 6:46:52 PM (15 years ago)
Author:
Frederik Heber <heber@…>
Branches:
Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
Children:
0fb9f6
Parents:
eff648 (diff), bab12a (diff)
Note: this is a merge changeset, the changes displayed below correspond to the merge itself.
Use the (diff) links above to see all the changes relative to each parent.
git-author:
Frederik Heber <heber@…> (05/19/10 18:45:23)
git-committer:
Frederik Heber <heber@…> (05/19/10 18:46:52)
Message:

Merge branch 'StructureRefactoring' into CommandLineActionMapping

Conflicts:

molecuilder/src/atom_particleinfo.cpp
molecuilder/src/builder.cpp

The following conflicts were solved:

  • in atom_particleinfo constructor the bugfix could not be merged automatically
  • in builder.cpp at the end of main() cleanup and memory:getstate() were still present.
File:
1 edited

Legend:

Unmodified
Added
Removed
  • src/atom_particleinfo.cpp

    reff648 r8de375  
    1111/** Constructor of ParticleInfo.
    1212 */
    13 ParticleInfo::ParticleInfo() : nr(-1), Name(NULL) {};
     13ParticleInfo::ParticleInfo() : nr(-1), name("Unknown") {
     14};
    1415
    1516ParticleInfo::ParticleInfo(ParticleInfo *pointer) :
    1617    nr(pointer->nr),
    17     Name(pointer->Name)
    18     {
    19       if (Name == NULL)
    20         Name = " ";
    21     }
     18    name(pointer->name)
     19    {}
    2220
    2321
     
    2523 */
    2624ParticleInfo::~ParticleInfo()
    27 {
    28   Free(&Name);
    29 };
     25{};
     26
     27const string& ParticleInfo::getName() const{
     28  return name;
     29}
     30
     31void ParticleInfo::setName(const string& _name){
     32  name = _name;
     33}
    3034
    3135ostream & operator << (ostream &ost, const ParticleInfo &a)
    3236{
    33   if (a.Name == NULL)
    34     ost << "[NULL]";
    35   else
    36     ost << "[" << a.Name << "|" << &a << "]";
     37  ost << "[" << a.getName() << "|" << &a << "]";
    3738  return ost;
    3839};
     
    4041ostream & ParticleInfo::operator << (ostream &ost) const
    4142{
    42   if (Name == NULL)
    43     ost << "[NULL]";
    44   else
    45     ost << "[" << Name << "|" << this << "]";
     43  ost << "[" << name << "|" << this << "]";
    4644  return ost;
    4745};
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