Ignore:
Timestamp:
Apr 10, 2018, 6:43:31 AM (7 years ago)
Author:
Frederik Heber <frederik.heber@…>
Branches:
AutomationFragmentation_failures, Candidate_v1.6.1, ChemicalSpaceEvaluator, Exclude_Hydrogens_annealWithBondGraph, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_contraction-expansion, Gui_displays_atomic_force_velocity, PythonUI_with_named_parameters, StoppableMakroAction, TremoloParser_IncreasedPrecision
Children:
6a5921, 897a01
Parents:
90ece9
git-author:
Frederik Heber <frederik.heber@…> (08/03/17 09:24:07)
git-committer:
Frederik Heber <frederik.heber@…> (04/10/18 06:43:31)
Message:

ForceAnnealing functions now have better readable time step variables.

  • _TimeStep is the parameter, Old.. and CurrentTimeStep designate the two reference time steps for calculating step width.
  • Split functions into simple step width and using BB step width.
  • TESTFIX: Removed XFAIL from all Python ForceAnnealing tests.
  • TESTFIX: 5-body annealing without bond graph has slightly changed but quality of results is the same.
File:
1 edited

Legend:

Unmodified
Added
Removed
  • tests/Python/ForceAnnealing/testsuite-python-forceannealing-ising.at

    r90ece9 r8450da  
    3232AT_SETUP([Python externalization - Force Annealing without bondgraph on 5-body Ising model])
    3333AT_KEYWORDS([python force-annealing ising])
    34 AT_XFAIL_IF([/bin/true])
    3534
    3635# we use forces from a simple Ising model with 5 "carbon" atoms in a row along the x axis
     
    3837file=five_carbon_test.data
    3938AT_CHECK([../../run ${abs_top_srcdir}/tests/Python/ForceAnnealing/pre/ising_model_chain.py ./$file ./ 15 5 "0"], 0, [stdout], [ignore])
    40 AT_CHECK([grep "Largest remaining force components.*0.0001" stdout], 0, [ignore], [ignore])
     39AT_CHECK([grep "Largest remaining force components.*e-05" stdout], 0, [ignore], [ignore])
    4140AT_CHECK([diff $file ${abs_top_srcdir}/tests/Python/ForceAnnealing/post/five_carbon_test_no-bondgraph.data], 0, [ignore], [ignore])
    4241
     
    4544AT_SETUP([Python externalization - Force Annealing with bondgraph on 2-body Ising model])
    4645AT_KEYWORDS([python force-annealing ising bondgraph])
    47 AT_XFAIL_IF([/bin/true])
    4846AT_SKIP_IF([../../run ${abs_top_srcdir}/tests/Python/numpy_check.py])
    4947
     
    5957AT_SETUP([Python externalization - Force Annealing with bondgraph on 5-body Ising model])
    6058AT_KEYWORDS([python force-annealing ising bondgraph])
    61 AT_XFAIL_IF([/bin/true])
    6259AT_SKIP_IF([../../run ${abs_top_srcdir}/tests/Python/numpy_check.py])
    6360
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