Changeset 765f16 for src/Parser/TremoloParser.hpp
- Timestamp:
- Oct 14, 2011, 3:15:30 PM (13 years ago)
- Branches:
- Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
- Children:
- d3d6c6
- Parents:
- 9a6b76e
- git-author:
- Frederik Heber <heber@…> (09/27/11 19:04:36)
- git-committer:
- Frederik Heber <heber@…> (10/14/11 15:15:30)
- File:
-
- 1 edited
Legend:
- Unmodified
- Added
- Removed
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src/Parser/TremoloParser.hpp
r9a6b76e r765f16 14 14 #endif 15 15 16 #include <string> 16 17 17 #include <string> 18 #include "Parser/FormatParser.hpp" 18 #include "FormatParser.hpp" 19 #include "FormatParserTrait.hpp" 20 #include "FormatParserInterface.hpp" 21 #include "FormatParser_common.hpp" 22 #include "ParserTypes.hpp" 19 23 20 24 #include "TremoloKey.hpp" … … 23 27 class molecule; 24 28 29 // declaration of specialized FormatParserTrait 30 template<> 31 struct FormatParserTrait<tremolo> 32 { 33 //!> Name of the parser 34 static const std::string name; 35 //!> suffix of the files the parser understands to read and write 36 static const std::string suffix; 37 //!> ParserTypes enumeration for the parser 38 static const enum ParserTypes type; 39 }; 40 25 41 /** 26 42 * Loads a tremolo file into the World and saves the World as a tremolo file. 27 43 */ 28 class TremoloParser : public FormatParser 44 template <> 45 class FormatParser< tremolo > : virtual public FormatParserInterface, public FormatParser_common 29 46 { 30 47 public: 31 TremoloParser();32 virtual ~ TremoloParser();48 FormatParser(); 49 virtual ~FormatParser(); 33 50 void load(std::istream* file); 34 51 void save(std::ostream* file, const std::vector<atom *> &atoms); … … 44 61 45 62 private: 46 void readAtomDataLine(st ring line);47 void readAtomDataLine(st ring line, molecule *newmol);48 void parseAtomDataKeysLine(st ring line, int offset);63 void readAtomDataLine(std::string line); 64 void readAtomDataLine(std::string line, molecule *newmol); 65 void parseAtomDataKeysLine(std::string line, int offset); 49 66 void readNeighbors(std::stringstream* line, int numberOfNeighbors, int atomId); 50 67 void processNeighborInformation();
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