Changeset 1b64b2f for doc/userguide/userguide.xml
- Timestamp:
- May 8, 2017, 2:04:19 PM (8 years ago)
- Branches:
- ForceAnnealing_goodresults, ForceAnnealing_tocheck
- Children:
- 7ee4b5
- Parents:
- 485eea
- git-author:
- Frederik Heber <heber@…> (04/06/17 05:09:37)
- git-committer:
- Frederik Heber <frederik.heber@…> (05/08/17 14:04:19)
- File:
-
- 1 edited
Legend:
- Unmodified
- Added
- Removed
-
doc/userguide/userguide.xml
r485eea r1b64b2f 2207 2207 combines the same Actions as <emphasis role="bold">molecular-dynamics</emphasis> does. However, it 2208 2208 uses the <emphasis role="bold">force-annealing</emphasis> action instead of <emphasis role="bold">verlet-integration</emphasis>.</para> 2209 <remark>Because it is a MacroAction we cannot use any more elaborate 2210 line search method during the optimization. In essence, we minimize the 2211 energy function that depends on the nuclei coordinates. The function is 2212 non-linear and non-convex. The best choice, given that we have gradient 2213 information, would be the Conjugate Gradient method (such as Fletcher- 2214 Reeves which work well also for non-linear functions). However, these 2215 methods perform a line search along the gradient direction which we 2216 cannot as our Actions do not contain any internal information (apart 2217 from the state for Undo/Redo). Therefore, we are restricted to the 2218 method of Barzilai-Borwein where no line-search is needed but that also 2219 works well for high-dimensional minimization problems.</remark> 2209 2220 <para>The command below performs a structure optimization of the 2210 2221 currently selected atoms (may also be a subset) for up to 100 time … … 2219 2230 --order 3 \ 2220 2231 --distance 3. \ 2221 --deltat 0.5 \2222 2232 --keep-fixed-CenterOfMass 1 \ 2223 2233 --fragment-executable mpqc \ … … 2227 2237 Otherwise only two time steps would be created: the initial and 2228 2238 the final one containing the optimized structure.</para> 2239 <para>Because of the use of Barzilai-Borwein for computing the 2240 stepwidth we do not need any 'deltat' parameters. If the computed 2241 step width is zero, we use a default step width of 1.</para> 2229 2242 </section> 2230 2243 <section xml:id="dynamics.step-world-time">
Note:
See TracChangeset
for help on using the changeset viewer.