Action_Thermostats
        Add_AtomRandomPerturbation
        Add_RotateAroundBondAction
        Add_SelectAtomByNameAction
        Adding_Graph_to_ChangeBondActions
        Adding_MD_integration_tests
        Adding_StructOpt_integration_tests
        AutomationFragmentation_failures
        Candidate_v1.6.0
        Candidate_v1.6.1
        Candidate_v1.7.0
        ChangeBugEmailaddress
        ChangingTestPorts
        ChemicalSpaceEvaluator
        Combining_Subpackages
        Debian_Package_split
        Debian_package_split_molecuildergui_only
        Disabling_MemDebug
        Docu_Python_wait
        EmpiricalPotential_contain_HomologyGraph_documentation
        Enable_parallel_make_install
        Enhance_userguide
        Enhanced_StructuralOptimization
        Enhanced_StructuralOptimization_continued
        Example_ManyWaysToTranslateAtom
        Exclude_Hydrogens_annealWithBondGraph
        FitPartialCharges_GlobalError
        Fix_ChronosMutex
        Fix_StatusMsg
        Fix_StepWorldTime_single_argument
        Fix_Verbose_Codepatterns
        ForceAnnealing_goodresults
        ForceAnnealing_oldresults
        ForceAnnealing_tocheck
        ForceAnnealing_with_BondGraph
        ForceAnnealing_with_BondGraph_continued
        ForceAnnealing_with_BondGraph_continued_betteresults
        ForceAnnealing_with_BondGraph_contraction-expansion
        GeometryObjects
        Gui_displays_atomic_force_velocity
        IndependentFragmentGrids_IntegrationTest
        JobMarket_RobustOnKillsSegFaults
        JobMarket_StableWorkerPool
        JobMarket_unresolvable_hostname_fix
        PartialCharges_OrthogonalSummation
        PythonUI_with_named_parameters
        QtGui_reactivate_TimeChanged_changes
        Recreated_GuiChecks
        RotateToPrincipalAxisSystem_UndoRedo
        StoppableMakroAction
        TremoloParser_IncreasedPrecision
        TremoloParser_MultipleTimesteps
        Ubuntu_1604_changes
        stable
      
      
        
          | 
            Last change
 on this file since 39f22f was             caece4, checked in by Frederik Heber <heber@…>, 11 years ago           | 
        
        
          | 
             
Enhanced documentation significantly. 
 
- went through all of the constructs and updated each.
 - enhanced documentation ofr Fragmentation::FragmentMolecule().
  
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            File size:
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| 1 | /*
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| 2 |  * Project: MoleCuilder
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| 3 |  * Description: creates and alters molecular systems
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| 4 |  * Copyright (C)  2010 University of Bonn. All rights reserved.
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| 5 |  * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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| 6 |  */
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| 7 | 
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| 8 | /**
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| 9 |  * \file commandline.dox
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| 10 |  *
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| 11 |  * Created on: Oct 31, 2011
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| 12 |  *    Author: heber
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| 13 |  */
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| 14 | 
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| 15 | /**
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| 16 |  * \page userinterfaces-commandline Command Line Interface
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| 17 |  *
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| 18 |  * The command line interface allows for using MoleCuilder within scripts such
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| 19 |  * system with only slightly varying parameters can be built in a straight-
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| 20 |  * forward way.
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| 21 |  *
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| 22 |  * Commands are parsed via the CommandLineParser which uses boost::program_options
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| 23 |  * to recognize the given options. ActionRegistry and OptionRegistry are used
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| 24 |  * to distinguish Option's from Action's. Each option has a specific type and a
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| 25 |  * Validator ascertains that the value associated with this option and of this
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| 26 |  * specific type matches certain criteria.
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| 27 |  *
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| 28 |  * So far the sequence of the Option's is not really important but for the
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| 29 |  * Action's the ordering counts: first come, first serve.
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| 30 |  *
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| 31 |  * Undoing is possible from the command-line as well. But is so far only used in
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| 32 |  * the regression test to test its functionality. However, as the ActionHistory,
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| 33 |  * or rather ActionQueue, can be saved as a session, this is useful as in a restored
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| 34 |  * ActionHistory undo would allow for traversing back in this history.
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| 35 |  *
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| 36 |  *
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| 37 |  * \date 2014-03-10
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| 38 |  *
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| 39 |  */
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