[f4d063] | 1 | /*
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| 2 | * Project: MoleCuilder
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| 3 | * Description: creates and alters molecular systems
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| 4 | * Copyright (C) 2010 University of Bonn. All rights reserved.
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| 5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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| 6 | */
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| 7 |
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| 8 | /*
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| 9 | * builder_init.cpp
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| 10 | *
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| 11 | * Created on: Dec 15, 2010
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| 12 | * Author: heber
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| 13 | */
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| 14 |
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| 15 | // include config.h
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| 16 | #ifdef HAVE_CONFIG_H
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| 17 | #include <config.h>
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| 18 | #endif
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| 19 |
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[ad011c] | 20 | #include "CodePatterns/MemDebug.hpp"
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[f4d063] | 21 |
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[4e855e] | 22 | #include <iostream>
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| 23 |
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[f4d063] | 24 | #include "bondgraph.hpp"
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| 25 | #include "config.hpp"
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[ad011c] | 26 | #include "CodePatterns/Log.hpp"
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[f4d063] | 27 | #include "molecule.hpp"
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| 28 | #include "periodentafel.hpp"
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| 29 | #include "tesselationhelpers.hpp"
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| 30 | #include "UIElements/UIFactory.hpp"
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| 31 | #include "UIElements/Menu/MenuDescription.hpp"
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| 32 | #include "UIElements/TextUI/TextUIFactory.hpp"
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| 33 | #include "UIElements/CommandLineUI/CommandLineUIFactory.hpp"
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| 34 | #include "UIElements/CommandLineUI/CommandLineParser.hpp"
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| 35 | #ifdef USE_GUI_QT
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| 36 | #include "UIElements/Qt4/QtUIFactory.hpp"
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| 37 | #endif
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| 38 | #include "UIElements/MainWindow.hpp"
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| 39 | #include "UIElements/Dialog.hpp"
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| 40 | //#include "Menu/ActionMenuItem.hpp"
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[ad011c] | 41 | #include "CodePatterns/Verbose.hpp"
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[f4d063] | 42 | #include "World.hpp"
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| 43 |
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| 44 | #include "Actions/ActionRegistry.hpp"
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| 45 | #include "Actions/ActionHistory.hpp"
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| 46 |
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[1d5a871] | 47 | #include "RandomNumbers/RandomNumberDistributionFactory.hpp"
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| 48 | #include "RandomNumbers/RandomNumberEngineFactory.hpp"
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[3f9eba] | 49 | #include "RandomNumbers/RandomNumberGeneratorFactory.hpp"
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| 50 |
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[f4d063] | 51 | #include "Parser/ChangeTracker.hpp"
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| 52 | #include "Parser/FormatParserStorage.hpp"
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| 53 |
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| 54 | #include "UIElements/UIFactory.hpp"
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| 55 | #include "UIElements/TextUI/TextUIFactory.hpp"
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| 56 | #include "UIElements/CommandLineUI/CommandLineUIFactory.hpp"
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| 57 | #include "UIElements/MainWindow.hpp"
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| 58 | #include "UIElements/Dialog.hpp"
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| 59 |
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| 60 | #include "version.h"
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| 61 |
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| 62 | #include "builder_init.hpp"
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| 63 |
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| 64 | /** Print some initial information output the program.
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| 65 | *
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| 66 | */
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| 67 | void ProgramHeader()
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| 68 | {
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| 69 | // print version check and copyright notice
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| 70 | cout << MOLECUILDERVERSION << endl;
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| 71 | cout << "MoleCuilder comes with ABSOLUTELY NO WARRANTY; for details type" << endl;
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| 72 | cout << "`molecuilder --warranty'." << endl;
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| 73 | cout << "`MoleCuilder - to create and alter molecular systems." << endl;
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| 74 | cout << "Copyright (C) 2010 University Bonn. All rights reserved." << endl;
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[ad7270] | 75 | cout << endl;
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[f4d063] | 76 | }
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| 77 |
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| 78 | /** General stuff to intialize before UI.
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| 79 | *
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| 80 | */
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| 81 | void initGeneral()
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| 82 | {
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| 83 | // while we are non interactive, we want to abort from asserts
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| 84 | ASSERT_DO(Assert::Abort);
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| 85 | ASSERT_HOOK(dumpMemory);
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| 86 |
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| 87 | ProgramHeader();
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| 88 |
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[ad7270] | 89 | setVerbosity(1);
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[f4d063] | 90 | // need to init the history before any action is created
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| 91 | ActionHistory::init();
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| 92 |
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| 93 | // from this moment on, we need to be sure to deeinitialize in the correct order
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| 94 | // this is handled by the cleanup function
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| 95 | atexit(cleanUp);
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| 96 | }
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| 97 |
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| 98 | /** Initialize specific UIFactory.
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| 99 | *
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| 100 | * @param argc argument count
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| 101 | * @param argv argument array
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| 102 | */
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| 103 | void initUI(int argc, char **argv)
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| 104 | {
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| 105 | std::string BondGraphFileName("\n");
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| 106 | // Parse command line options and if present create respective UI
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| 107 | // construct bond graph
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| 108 | if (World::getInstance().getConfig()->BG == NULL) {
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| 109 | World::getInstance().getConfig()->BG = new BondGraph(World::getInstance().getConfig()->GetIsAngstroem());
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[ad7270] | 110 | if (boost::filesystem::exists(BondGraphFileName)) {
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[4e855e] | 111 | std::ifstream input(BondGraphFileName.c_str());
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| 112 | if ((input.good()) && (World::getInstance().getConfig()->BG->LoadBondLengthTable(input))) {
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[ad7270] | 113 | DoLog(0) && (Log() << Verbose(0) << "Bond length table loaded successfully." << endl);
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| 114 | } else {
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| 115 | DoeLog(1) && (eLog()<< Verbose(1) << "Bond length table loading failed." << endl);
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| 116 | }
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[4e855e] | 117 | input.close();
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[f4d063] | 118 | }
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| 119 | }
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| 120 | // handle remaining arguments by CommandLineParser
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| 121 | if (argc>1) {
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[ad7270] | 122 | DoLog(0) && (Log() << Verbose(0) << "Setting UI to CommandLine." << endl);
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[f4d063] | 123 | CommandLineParser::getInstance().InitializeCommandArguments();
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| 124 | CommandLineParser::getInstance().Run(argc,argv);
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| 125 | UIFactory::registerFactory(new CommandLineUIFactory::description());
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| 126 | UIFactory::makeUserInterface("CommandLine");
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| 127 | } else {
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| 128 | // In the interactive mode, we can leave the user the choice in case of error
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| 129 | ASSERT_DO(Assert::Ask);
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| 130 | #ifdef USE_GUI_QT
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| 131 | DoLog(0) && (Log() << Verbose(0) << "Setting UI to Qt4." << endl);
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| 132 | UIFactory::registerFactory(new QtUIFactory::description());
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| 133 | UIFactory::makeUserInterface("Qt4");
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| 134 | #else
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| 135 | DoLog(0) && (Log() << Verbose(0) << "Setting UI to Text." << endl);
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| 136 | cout << MOLECUILDERVERSION << endl;
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| 137 | UIFactory::registerFactory(new TextUIFactory::description());
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| 138 | UIFactory::makeUserInterface("Text");
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| 139 | #endif
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| 140 | }
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| 141 | }
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| 142 |
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| 143 | /** Create MainWindow and displays.
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| 144 | * I.e. here all the Actions are parsed and done.
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| 145 | */
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| 146 | void doUI()
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| 147 | {
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| 148 | MainWindow *mainWindow = UIFactory::getInstance().makeMainWindow();
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| 149 | mainWindow->display();
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| 150 | delete mainWindow;
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| 151 | }
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| 152 |
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| 153 |
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| 154 | /** In this function all dynamicly allocated member variables to static/global
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| 155 | * variables are added to the ignore list of Memory/MemDebug.
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| 156 | *
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| 157 | * Use this to prevent their listing in the Memory::getState() at the end of the
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| 158 | * program. Check with valgrind that truely no memory leak occurs!
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| 159 | */
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| 160 | void AddStaticEntitiestoIgnoreList()
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| 161 | {
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| 162 | // zeroVec and unitVec are global variables (on the stack) but vectorContent
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| 163 | // within is situated on the heap and has to be ignored
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| 164 | Memory::ignore(zeroVec.get());
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| 165 | Memory::ignore(unitVec[0].get());
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| 166 | Memory::ignore(unitVec[1].get());
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| 167 | Memory::ignore(unitVec[2].get());
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| 168 | }
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| 169 |
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| 170 | /** Cleans all singleton instances in an orderly fashion.
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| 171 | * C++ does not guarantee any specific sequence of removal of single instances
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| 172 | * which have static/global variables. Some singletons depend on others hence we
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| 173 | * acertain a specific ordering here, which is is used via the atexit() hook.
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| 174 | */
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| 175 | void cleanUp()
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| 176 | {
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[c9bc2b7] | 177 | RandomNumberDistributionFactory::purgeInstance();
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| 178 | RandomNumberEngineFactory::purgeInstance();
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[3f9eba] | 179 | RandomNumberGeneratorFactory::purgeInstance();
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[f4d063] | 180 | FormatParserStorage::purgeInstance();
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| 181 | ChangeTracker::purgeInstance();
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| 182 | World::purgeInstance();
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| 183 | MenuDescription::purgeInstance();
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| 184 | UIFactory::purgeInstance();
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| 185 | ValueStorage::purgeInstance();
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| 186 | CommandLineParser::purgeInstance();
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| 187 | ActionRegistry::purgeInstance();
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| 188 | OptionRegistry::purgeInstance();
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| 189 | ActionHistory::purgeInstance();
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| 190 | // we have to remove these two static as otherwise their boost::shared_ptrs are still present
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| 191 | Action::removeStaticStateEntities();
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| 192 | // put some static variables' dynamic contents on the Memory::ignore map to avoid their
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| 193 | // admonishing lateron
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| 194 | AddStaticEntitiestoIgnoreList();
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| 195 | logger::purgeInstance();
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| 196 | errorLogger::purgeInstance();
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| 197 | #ifdef LOG_OBSERVER
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| 198 | cout << observerLog().getLog();
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| 199 | #endif
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| 200 | Memory::getState();
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| 201 | }
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| 202 |
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| 203 | /** Dump current memory chunks.
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| 204 | *
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| 205 | */
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| 206 | void dumpMemory()
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| 207 | {
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| 208 | ofstream ost("molecuilder.memdump");
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| 209 | Memory::dumpMemory(ost);
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| 210 | }
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| 211 |
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| 212 | /** Save the current World to output files and exit.
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| 213 | *
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| 214 | * @return retrieved from World::getExitFlag()
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| 215 | */
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| 216 | int saveAll()
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| 217 | {
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| 218 | int test[500000];
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| 219 | for (size_t i=0;i<500000;++i) {
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| 220 | test[i] = (int)i;
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| 221 | }
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| 222 | FormatParserStorage::getInstance().SaveAll();
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| 223 | ChangeTracker::getInstance().saveStatus();
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| 224 |
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| 225 | int ExitFlag = World::getInstance().getExitFlag();
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| 226 | return (ExitFlag == 1 ? 0 : ExitFlag);
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| 227 | }
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