1 | /*
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2 | * VMGJob.hpp
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3 | *
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4 | * Created on: Jul 12, 2012
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5 | * Author: heber
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6 | */
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7 |
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8 | #ifndef VMGJOB_HPP_
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9 | #define VMGJOB_HPP_
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10 |
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11 |
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12 | // include config.h
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13 | #ifdef HAVE_CONFIG_H
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14 | #include <config.h>
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15 | #endif
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16 |
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17 | #include "boost/serialization/export.hpp"
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18 | #include "boost/serialization/vector.hpp"
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19 |
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20 | #include "JobMarket/Jobs/FragmentJob.hpp"
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21 | #include "Fragmentation/Summation/SetValues/SamplingGrid.hpp"
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22 | #include "Fragmentation/Summation/Containers/VMGData.hpp"
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23 |
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24 | #include <vector>
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25 |
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26 | /** This class encapsulates a VMG Job.
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27 | *
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28 | * VMGJob calculates the long-range contribution that is missed out so far in the
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29 | * MPQCJob where the SCF cycle is calculated. To this end
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30 | *
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31 | */
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32 | class VMGJob : public FragmentJob
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33 | {
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34 | public:
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35 | /** Constructor for class VMGJob.
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36 | *
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37 | * @param _JobId id of the job
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38 | * @param _density_grid sampled electron charge density from short-range solutions
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39 | * @param _particle_positions position per nuclei
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40 | * @param _particle_charges charges per nuclei
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41 | * @param _near_field_cells number of grid-points used to smear our nuclei charge
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42 | * @param _interpolation_degree degree of interpolation polynomial for getting nuclei
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43 | * potential from grid
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44 | * @param _DoPrintDebug whether we do print grid for debug visualization or not
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45 | */
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46 | VMGJob(const JobId_t _JobId,
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47 | const SamplingGrid &density_grid,
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48 | const std::vector< std::vector< double > > &_particle_positions,
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49 | const std::vector< double > &_particle_charges,
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50 | const size_t _near_field_cells,
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51 | const size_t _interpolation_degree,
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52 | const bool _DoPrintDebug=false
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53 | );
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54 | virtual ~VMGJob();
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55 |
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56 | FragmentResult::ptr Work();
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57 |
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58 | private:
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59 | void InitVMG();
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60 |
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61 | void InitVMGArrays();
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62 |
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63 | private:
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64 | //!> sampled density required as input
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65 | const SamplingGrid density_grid;
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66 | //!> positions of all nuclei
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67 | const std::vector< std::vector< double > > particle_positions;
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68 | //!> charges of all nuclei
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69 | const std::vector< double > particle_charges;
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70 | //!> near field cells used in smearing out core charge density
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71 | const size_t near_field_cells;
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72 | //!> interpolation degree used in sampling the potential of the nuclei
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73 | const size_t interpolation_degree;
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74 | //!> whether we do print grid for debug visualization or not
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75 | const bool DoPrintDebug;
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76 |
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77 | private:
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78 | //!> temporary instance to hold return data
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79 | VMGData returndata;
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80 |
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81 | /** This structure stores particle values per particle.
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82 | *
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83 | * \note This structure contains temporary information needed during solving
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84 | * with VMG.
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85 | * \warning It is specifically not serialized!
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86 | *
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87 | */
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88 | struct particle_arrays {
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89 | particle_arrays();
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90 | ~particle_arrays();
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91 |
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92 | /** Initializes arrays.
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93 | *
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94 | * @param _num_particles size of array per dimension
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95 | */
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96 | void init(const size_t _num_particles);
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97 |
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98 | //!> number of particles
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99 | size_t num_particles;
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100 | //!> forces array
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101 | double *f;
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102 | //!> position array
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103 | double *x;
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104 | //!> potential array
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105 | double *p;
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106 | //!> charge array
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107 | double *q;
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108 | } particles;
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109 |
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110 | private:
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111 | /** private default cstor for serialization only
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112 | */
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113 | VMGJob();
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114 |
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115 | friend class boost::serialization::access;
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116 | // serialization
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117 | template <typename Archive>
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118 | void serialize(Archive& ar, const unsigned int version)
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119 | {
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120 | ar & boost::serialization::base_object<FragmentJob>(*this);
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121 | ar & const_cast< SamplingGrid &>(density_grid);
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122 | ar & const_cast< std::vector< std::vector< double > > &>(particle_positions);
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123 | ar & const_cast< std::vector< double > &>(particle_charges);
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124 | ar & const_cast< size_t &>(near_field_cells);
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125 | ar & const_cast< size_t &>(interpolation_degree);
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126 | ar & const_cast< bool &>(DoPrintDebug);
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127 | ar & returndata;
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128 | }
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129 | };
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130 |
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131 | // we need to give this class a unique key for serialization
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132 | // its is only serialized through its base class FragmentJob
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133 | BOOST_CLASS_EXPORT_KEY(VMGJob)
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134 |
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135 | #endif /* VMGJOB_HPP_ */
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