source: src/Jobs/VMGJob.hpp@ b6b21a

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Last change on this file since b6b21a was b6b21a, checked in by Frederik Heber <heber@…>, 12 years ago

Added option DoPrintDebug to FragmentationAutomationAction.

  • this controls whether VTK debug grid are printed to file or not and also whether DebugJobs are used.
  • Property mode set to 100644
File size: 3.7 KB
Line 
1/*
2 * VMGJob.hpp
3 *
4 * Created on: Jul 12, 2012
5 * Author: heber
6 */
7
8#ifndef VMGJOB_HPP_
9#define VMGJOB_HPP_
10
11
12// include config.h
13#ifdef HAVE_CONFIG_H
14#include <config.h>
15#endif
16
17#include "boost/serialization/export.hpp"
18#include "boost/serialization/vector.hpp"
19
20#include "JobMarket/Jobs/FragmentJob.hpp"
21#include "Fragmentation/Summation/SetValues/SamplingGrid.hpp"
22#include "Fragmentation/Summation/Containers/VMGData.hpp"
23
24#include <vector>
25
26/** This class encapsulates a VMG Job.
27 *
28 * VMGJob calculates the long-range contribution that is missed out so far in the
29 * MPQCJob where the SCF cycle is calculated. To this end
30 *
31 */
32class VMGJob : public FragmentJob
33{
34public:
35 /** Constructor for class VMGJob.
36 *
37 * @param _JobId id of the job
38 * @param _density_grid sampled electron charge density from short-range solutions
39 * @param _particle_positions position per nuclei
40 * @param _particle_charges charges per nuclei
41 * @param _near_field_cells number of grid-points used to smear our nuclei charge
42 * @param _interpolation_degree degree of interpolation polynomial for getting nuclei
43 * potential from grid
44 * @param _DoPrintDebug whether we do print grid for debug visualization or not
45 */
46 VMGJob(const JobId_t _JobId,
47 const SamplingGrid &density_grid,
48 const std::vector< std::vector< double > > &_particle_positions,
49 const std::vector< double > &_particle_charges,
50 const size_t _near_field_cells,
51 const size_t _interpolation_degree,
52 const bool _DoPrintDebug=false
53 );
54 virtual ~VMGJob();
55
56 FragmentResult::ptr Work();
57
58private:
59 void InitVMG();
60
61 void InitVMGArrays();
62
63private:
64 //!> sampled density required as input
65 const SamplingGrid density_grid;
66 //!> positions of all nuclei
67 const std::vector< std::vector< double > > particle_positions;
68 //!> charges of all nuclei
69 const std::vector< double > particle_charges;
70 //!> near field cells used in smearing out core charge density
71 const size_t near_field_cells;
72 //!> interpolation degree used in sampling the potential of the nuclei
73 const size_t interpolation_degree;
74 //!> whether we do print grid for debug visualization or not
75 const bool DoPrintDebug;
76
77private:
78 //!> temporary instance to hold return data
79 VMGData returndata;
80
81 /** This structure stores particle values per particle.
82 *
83 * \note This structure contains temporary information needed during solving
84 * with VMG.
85 * \warning It is specifically not serialized!
86 *
87 */
88 struct particle_arrays {
89 particle_arrays();
90 ~particle_arrays();
91
92 /** Initializes arrays.
93 *
94 * @param _num_particles size of array per dimension
95 */
96 void init(const size_t _num_particles);
97
98 //!> number of particles
99 size_t num_particles;
100 //!> forces array
101 double *f;
102 //!> position array
103 double *x;
104 //!> potential array
105 double *p;
106 //!> charge array
107 double *q;
108 } particles;
109
110private:
111 /** private default cstor for serialization only
112 */
113 VMGJob();
114
115 friend class boost::serialization::access;
116 // serialization
117 template <typename Archive>
118 void serialize(Archive& ar, const unsigned int version)
119 {
120 ar & boost::serialization::base_object<FragmentJob>(*this);
121 ar & const_cast< SamplingGrid &>(density_grid);
122 ar & const_cast< std::vector< std::vector< double > > &>(particle_positions);
123 ar & const_cast< std::vector< double > &>(particle_charges);
124 ar & const_cast< size_t &>(near_field_cells);
125 ar & const_cast< size_t &>(interpolation_degree);
126 ar & const_cast< bool &>(DoPrintDebug);
127 ar & returndata;
128 }
129};
130
131// we need to give this class a unique key for serialization
132// its is only serialized through its base class FragmentJob
133BOOST_CLASS_EXPORT_KEY(VMGJob)
134
135#endif /* VMGJOB_HPP_ */
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