source: src/Fragmentation/Makefile.am@ a3427f

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since a3427f was fbf143, checked in by Frederik Heber <heber@…>, 12 years ago

Placed Containers, Converter, and SetValues as subfolders into Summation.

  • also libMolecuilderFragmentationSummation is now a shared library, easing linkage to libMolecuilderJobs, and contains all of the three convenience libraries.
  • libMolecuilderFragmentationSetValues is now again convenience, as contained in ..Summation which in turn is shared.
  • KeySetsContainer right now is the link between lib..Summation and lib.. Fragmentation. Hence, we had to extract the module and change it into a shared library, as it is required by libMolecuilderJobs through ..Summation but also by ..Fragmentation that heavily relies on this container.
  • moved parseKeySetFile down into Fragmentation folder to KeySetsContainer, it is also contained in new shared library libMolecuilderFragmentation_ KeySetsContainer.
  • Property mode set to 100644
File size: 6.0 KB
Line 
1# PLEASE adhere to the alphabetical ordering in this Makefile!
2# Also indentation by a single tab
3
4FRAGMENTATIONSOURCE = \
5 Fragmentation/Exporters/ExportGraph_ToFiles.cpp \
6 Fragmentation/Exporters/ExportGraph.cpp \
7 Fragmentation/Exporters/HydrogenPool.cpp \
8 Fragmentation/Exporters/SaturatedFragment.cpp \
9 Fragmentation/Homology/FragmentEdge.cpp \
10 Fragmentation/Homology/FragmentNode.cpp \
11 Fragmentation/Homology/HomologyContainer.cpp \
12 Fragmentation/Homology/HomologyGraph.cpp \
13 Fragmentation/AdaptivityMap.cpp \
14 Fragmentation/BondsPerShortestPath.cpp \
15 Fragmentation/EnergyMatrix.cpp \
16 Fragmentation/ForceMatrix.cpp \
17 Fragmentation/Fragmentation.cpp \
18 Fragmentation/fragmentation_helpers.cpp \
19 Fragmentation/Graph.cpp \
20 Fragmentation/helpers.cpp \
21 Fragmentation/HessianMatrix.cpp \
22 Fragmentation/KeySet.cpp \
23 Fragmentation/MatrixContainer.cpp \
24 Fragmentation/PowerSetGenerator.cpp \
25 Fragmentation/SortIndex.cpp \
26 Fragmentation/UniqueFragments.cpp
27
28FRAGMENTATIONHEADER = \
29 Fragmentation/Exporters/ExportGraph_ToFiles.hpp \
30 Fragmentation/Exporters/ExportGraph.hpp \
31 Fragmentation/Exporters/HydrogenPool.hpp \
32 Fragmentation/Exporters/SaturatedFragment.hpp \
33 Fragmentation/Homology/FragmentEdge.hpp \
34 Fragmentation/Homology/FragmentNode.hpp \
35 Fragmentation/Homology/HomologyContainer.hpp \
36 Fragmentation/Homology/HomologyGraph.hpp \
37 Fragmentation/AdaptivityMap.hpp \
38 Fragmentation/AtomMask.hpp \
39 Fragmentation/BondsPerShortestPath.hpp \
40 Fragmentation/defs.hpp \
41 Fragmentation/EnergyMatrix.hpp \
42 Fragmentation/ForceMatrix.hpp \
43 Fragmentation/Fragmentation.hpp \
44 Fragmentation/fragmentation_helpers.hpp \
45 Fragmentation/Graph.hpp \
46 Fragmentation/helpers.cpp \
47 Fragmentation/helpers.hpp \
48 Fragmentation/HessianMatrix.hpp \
49 Fragmentation/HydrogenSaturation_enum.hpp \
50 Fragmentation/KeySet.hpp \
51 Fragmentation/MatrixContainer.hpp \
52 Fragmentation/Mask.hpp \
53 Fragmentation/MoleculeMask.hpp \
54 Fragmentation/PowerSetGenerator.hpp \
55 Fragmentation/SortIndex.hpp \
56 Fragmentation/UniqueFragments.hpp
57
58if CONDJOBMARKET
59FRAGMENTATIONSOURCE += \
60 Fragmentation/Exporters/ExportGraph_ToJobs.cpp
61FRAGMENTATIONHEADER += \
62 Fragmentation/Exporters/ExportGraph_ToJobs.hpp
63endif
64
65lib_LTLIBRARIES += \
66 libMolecuilderFragmentation_KeysetsContainer.la
67noinst_LTLIBRARIES += \
68 libMolecuilderFragmentation.la \
69 libMolecuilderFragmentation_getFromKeyset.la \
70 libMolecuilderFragmentation_getFromKeysetStub.la
71libMolecuilderFragmentation_la_includedir = $(includedir)/MoleCuilder/Fragmentation/
72libMolecuilderFragmentation_KeysetsContainer_la_includedir = $(includedir)/MoleCuilder/Fragmentation/
73libMolecuilderFragmentation_getFromKeyset_la_includedir = $(includedir)/MoleCuilder/Fragmentation/
74libMolecuilderFragmentation_getFromKeysetStub_la_includedir = $(includedir)/MoleCuilder/Fragmentation/
75libMolecuilderFragmentation_la_CPPFLAGS = $(AM_CPPFLAGS)
76libMolecuilderFragmentation_la_LDFLAGS = $(AM_LDFLAGS)
77libMolecuilderFragmentation_KeysetsContainer_la_LIBADD = \
78 $(CodePatterns_LIBS)
79libMolecuilderFragmentation_la_LIBADD =
80if CONDJOBMARKET
81libMolecuilderFragmentation_la_CPPFLAGS += ${JobMarket_CFLAGS}
82libMolecuilderFragmentation_la_LDFLAGS += $(JobMarket_LDFLAGS)
83libMolecuilderFragmentation_la_LIBADD += $(JobMarket_LIBS)
84endif
85
86nobase_libMolecuilderFragmentation_la_include_HEADERS = ${FRAGMENTATIONHEADER}
87nobase_libMolecuilderFragmentation_KeysetsContainer_la_include_HEADERS = \
88 Fragmentation/KeySetsContainer.hpp \
89 Fragmentation/parseKeySetFile.hpp
90
91## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
92## target. Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
93## will therefore be treated as if it were literally part of the target name,
94## and the variable name derived from that.
95## The file extension .cc is recognized by Automake, and makes it produce
96## rules which invoke the C++ compiler to produce a libtool object file (.lo)
97## from each source file. Note that it is not necessary to list header files
98## which are already listed elsewhere in a _HEADERS variable assignment.
99libMolecuilderFragmentation_la_SOURCES = ${FRAGMENTATIONSOURCE}
100libMolecuilderFragmentation_KeysetsContainer_la_SOURCES = \
101 Fragmentation/KeySetsContainer.cpp \
102 Fragmentation/parseKeySetFile.cpp
103libMolecuilderFragmentation_getFromKeyset_la_SOURCES = \
104 Fragmentation/Homology/HomologyGraph_getFromKeyset.cpp
105libMolecuilderFragmentation_getFromKeysetStub_la_SOURCES = \
106 Fragmentation/Homology/HomologyGraph_getFromKeysetStub.cpp
107
108## Instruct libtool to include ABI version information in the generated shared
109## library file (.so). The library ABI version is defined in configure.ac, so
110## that all version information is kept in one place.
111libMolecuilderFragmentation_KeysetsContainer_la_LDFLAGS = -version-info $(MOLECUILDER_SO_VERSION)
112
113## The generated configuration header is installed in its own subdirectory of
114## $(libdir). The reason for this is that the configuration information put
115## into this header file describes the target platform the installed library
116## has been built for. Thus the file must not be installed into a location
117## intended for architecture-independent files, as defined by the Filesystem
118## Hierarchy Standard (FHS).
119## The nodist_ prefix instructs Automake to not generate rules for including
120## the listed files in the distribution on 'make dist'. Files that are listed
121## in _HEADERS variables are normally included in the distribution, but the
122## configuration header file is generated at configure time and should not be
123## shipped with the source tarball.
124libMolecuilderFragmentation_KeysetsContainer_libincludedir = $(libdir)/MoleCuilder/include
125nodist_libMolecuilderFragmentation_KeysetsContainer_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h
126
127## Install the generated pkg-config file (.pc) into the expected location for
128## architecture-dependent package configuration information. Occasionally,
129## pkg-config files are also used for architecture-independent data packages,
130## in which case the correct install location would be $(datadir)/pkgconfig.
131#pkgconfigdir = $(libdir)/pkgconfig
132#pkgconfig_DATA = $(top_builddir)/MoleCuilder.pc
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