source: src/Fragmentation/Automation/FragmentController.cpp@ 402bde

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since 402bde was 3c4a5e, checked in by Frederik Heber <heber@…>, 13 years ago

Added ResultChecker and capability to check on computed jobs.

  • added handle_connect_check() to FragmentController.
  • FragmentScheduler::handle_AcceptController() switches between _ReceiveJobs or _CheckResultState depending on present jobs and done jobs. We use FragmentQueue::getDoneJobs() to store number of jobs handling connect.
  • TESTFIX: Enhanced regression test Fragmentation/Automation to use ResultChecker as well.
  • Property mode set to 100644
File size: 7.7 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2011 University of Bonn. All rights reserved.
5 * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
6 */
7
8/*
9 * FragmentController.cpp
10 *
11 * Created on: Nov 27, 2011
12 * Author: heber
13 */
14
15// include config.h
16#ifdef HAVE_CONFIG_H
17#include <config.h>
18#endif
19
20// boost asio needs specific operator new
21#include <boost/asio.hpp>
22
23#include "CodePatterns/MemDebug.hpp"
24
25#include <boost/bind.hpp>
26#include <iostream>
27#include <vector>
28#include "Connection.hpp" // Must come before boost/serialization headers.
29#include <boost/serialization/vector.hpp>
30#include "CodePatterns/Info.hpp"
31#include "CodePatterns/Log.hpp"
32#include "FragmentJob.hpp"
33#include "FragmentResult.hpp"
34
35#include "FragmentController.hpp"
36
37/** Constructor of class FragmentController.
38 *
39 * \param io_service io_service for the asynchronous operations
40 * \param _host hostname of server that accepts jobs
41 * \param _service of server
42 */
43FragmentController::FragmentController(
44 boost::asio::io_service& io_service,
45 const std::string& _host,
46 const std::string& _service) :
47 connection_(io_service),
48 host(_host),
49 service(_service),
50 Exitflag(OkFlag)
51{
52 Info info(__FUNCTION__);
53}
54
55/** Destructor of class FragmentController.
56 *
57 */
58FragmentController::~FragmentController()
59{}
60
61/** Handle completion of a connect operation.
62 *
63 * \param e error code if something went wrong
64 * \param endpoint_iterator endpoint of the connection
65 */
66void FragmentController::handle_connect_calc(const boost::system::error_code& e,
67 boost::asio::ip::tcp::resolver::iterator endpoint_iterator)
68{
69 Info info(__FUNCTION__);
70 if (!e)
71 {
72 // Successfully established connection. Start operation to read the vector
73 // of jobs. The connection::async_write() function will automatically
74 // encode the data that is written to the underlying socket.
75 LOG(1, "INFO: Sending "+toString(jobs.size())+" jobs ...");
76 connection_.async_write(jobs,
77 boost::bind(&FragmentController::handle_SendJobs, this,
78 boost::asio::placeholders::error));
79 } else if (endpoint_iterator != boost::asio::ip::tcp::resolver::iterator()) {
80 // Try the next endpoint.
81 connection_.socket().close();
82 boost::asio::ip::tcp::endpoint endpoint = *endpoint_iterator;
83 connection_.socket().async_connect(endpoint,
84 boost::bind(&FragmentController::handle_connect_calc, this,
85 boost::asio::placeholders::error, ++endpoint_iterator));
86 } else {
87 // An error occurred. Log it and return. Since we are not starting a new
88 // operation the io_service will run out of work to do and the client will
89 // exit.
90 Exitflag = ErrorFlag;
91 ELOG(1, e.message());
92 }
93}
94
95/** Handle completion of a connect operation.
96 *
97 * \param e error code if something went wrong
98 * \param endpoint_iterator endpoint of the connection
99 */
100void FragmentController::handle_connect_check(const boost::system::error_code& e,
101 boost::asio::ip::tcp::resolver::iterator endpoint_iterator)
102{
103 Info info(__FUNCTION__);
104 if (!e)
105 {
106 // Successfully established connection. Start operation to read the vector
107 // of jobs. The connection::async_write() function will automatically
108 // encode the data that is written to the underlying socket.
109 LOG(1, "INFO: Checking number of done jobs ...");
110 connection_.async_read(doneJobs,
111 boost::bind(&FragmentController::handle_ReceiveDoneJobs, this,
112 boost::asio::placeholders::error));
113 } else if (endpoint_iterator != boost::asio::ip::tcp::resolver::iterator()) {
114 // Try the next endpoint.
115 connection_.socket().close();
116 boost::asio::ip::tcp::endpoint endpoint = *endpoint_iterator;
117 connection_.socket().async_connect(endpoint,
118 boost::bind(&FragmentController::handle_connect_check, this,
119 boost::asio::placeholders::error, ++endpoint_iterator));
120 } else {
121 // An error occurred. Log it and return. Since we are not starting a new
122 // operation the io_service will run out of work to do and the client will
123 // exit.
124 Exitflag = ErrorFlag;
125 ELOG(1, e.message());
126 }
127}
128
129/** Callback function when jobs have been sent.
130 *
131 * \param e error code if something went wrong
132 */
133void FragmentController::handle_SendJobs(const boost::system::error_code& e)
134{
135 Info info(__FUNCTION__);
136 if (!e)
137 {
138 LOG(1, "INFO: Sent jobs ...");
139 }
140 else
141 {
142 // An error occurred.
143 Exitflag = ErrorFlag;
144 ELOG(1, e.message());
145 }
146
147 // Since we are not starting a new operation the io_service will run out of
148 // work to do and the client will exit.
149}
150
151/** Callback function when doneJobs have been received.
152 *
153 * \param e error code if something went wrong
154 */
155void FragmentController::handle_ReceiveDoneJobs(const boost::system::error_code& e)
156{
157 Info info(__FUNCTION__);
158 // Nothing to do.
159 LOG(1, "INFO: "+toString(doneJobs)+" jobs are currently done.");
160}
161
162/** Internal function to resolve all possible connection endpoints.
163 *
164 * \return endpoint iterator of connection
165 */
166boost::asio::ip::tcp::resolver::iterator FragmentController::getEndpointIterator()
167{
168 // Resolve the host name into an IP address.
169 boost::asio::ip::tcp::resolver resolver(connection_.socket().get_io_service());
170 boost::asio::ip::tcp::resolver::query query(host, service);
171 boost::asio::ip::tcp::resolver::iterator endpoint_iterator =
172 resolver.resolve(query);
173
174 return endpoint_iterator;
175}
176
177/** Internal function to connect to the endpoint of the server asynchronuously.
178 *
179 * We require internal connetion_ and host and service to be set up for this.
180 */
181void FragmentController::connect_calc()
182{
183 Info info(__FUNCTION__);
184 // Resolve the host name into an IP address.
185 boost::asio::ip::tcp::resolver::iterator endpoint_iterator = getEndpointIterator();
186 boost::asio::ip::tcp::endpoint endpoint = *endpoint_iterator;
187
188 // Start an asynchronous connect operation.
189 std::cout << "Connecting to endpoint " << endpoint << " to calc " << std::endl;
190 connection_.socket().async_connect(endpoint,
191 boost::bind(&FragmentController::handle_connect_calc, this,
192 boost::asio::placeholders::error, ++endpoint_iterator));
193}
194
195/** Internal function to connect to the endpoint of the server asynchronuously.
196 *
197 * We require internal connetion_ and host and service to be set up for this.
198 */
199void FragmentController::connect_check()
200{
201 Info info(__FUNCTION__);
202 // Resolve the host name into an IP address.
203 boost::asio::ip::tcp::resolver::iterator endpoint_iterator = getEndpointIterator();
204 boost::asio::ip::tcp::endpoint endpoint = *endpoint_iterator;
205
206 // Start an asynchronous connect operation.
207 std::cout << "Connecting to endpoint " << endpoint << " to check " << std::endl;
208 connection_.socket().async_connect(endpoint,
209 boost::bind(&FragmentController::handle_connect_check, this,
210 boost::asio::placeholders::error, ++endpoint_iterator));
211}
212
213/** Internal function to disconnect connection_ correctly.
214 *
215 */
216void FragmentController::disconnect()
217{
218 //connection_.socket().close();
219}
220
221/** Place number of jobs into this controller.
222 *
223 * \param _jobs jobs to add
224 */
225void FragmentController::addJobs(const std::vector<FragmentJob> &_jobs)
226{
227 jobs = _jobs;
228}
229
230/** Prepares the calculation of the results for the current jobs.
231 */
232void FragmentController::calculateResults()
233{
234 Info info(__FUNCTION__);
235 // connect
236 connect_calc();
237 //disconnect
238 disconnect();
239}
240
241/** Prepares the calculation of the results for the current jobs.
242 */
243void FragmentController::checkResults()
244{
245 Info info(__FUNCTION__);
246 // connect
247 connect_check();
248 //disconnect
249 disconnect();
250}
251
252/** Getter for doneJobs.
253 *
254 * \sa checkResults()
255 * \param doneJobs
256 */
257size_t FragmentController::getDoneJobs() const
258{
259 return doneJobs;
260}
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