source: src/AtomicInfo.cpp@ 54b42e

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since 54b42e was bce72c, checked in by Frederik Heber <heber@…>, 14 years ago

AtomicInfo::AtomicVelocity and ::AtomicForce are now private.

  • Access is granted via getters and setters.
  • Property mode set to 100644
File size: 1.7 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2010 University of Bonn. All rights reserved.
5 * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
6 */
7
8/*
9 * AtomicInfo.cpp
10 *
11 * Created on: Aug 10, 2010
12 * Author: heber
13 */
14
15// include config.h
16#ifdef HAVE_CONFIG_H
17#include <config.h>
18#endif
19
20#include "CodePatterns/MemDebug.hpp"
21
22#include "atom.hpp"
23#include "AtomicInfo.hpp"
24#include "element.hpp"
25#include "LinearAlgebra/Vector.hpp"
26
27/********************************** Functions for class AtomicInfo **********************************/
28
29AtomicInfo::AtomicInfo() :
30 Type(NULL),
31 Father(NULL),
32 Id(-1)
33{}
34AtomicInfo::AtomicInfo(const atom &_atom) :
35 Position(_atom.getPosition()),
36 Type(_atom.getType()),
37 Velocity(_atom.getAtomicVelocity()),
38 Father(_atom.father),
39 Mol(_atom.getMolecule()),
40 Id(_atom.getId())
41{}
42
43AtomicInfo::~AtomicInfo()
44{}
45
46
47bool AtomicInfo::setAtom(atom &_atom) const
48{
49 _atom.setPosition(Position);
50 _atom.setType(Type);
51 _atom.father = const_cast<atom *>(Father); // TODO: Actually, atom::father should be const atom *!
52 _atom.setMolecule(const_cast<molecule *>(Mol)); // this is ok, mol is const within AtomicInfo, but not outside (atoms need to register)
53 _atom.setAtomicVelocity(Velocity);
54 if (_atom.getId() == Id)
55 return true;
56 else
57 return (_atom.changeId(Id));
58}
59
60atomId_t AtomicInfo::getId() const {
61 return Id;
62}
63
64AtomicInfo& AtomicInfo::operator=(const AtomicInfo& AI)
65{
66 if (&AI == this) // check self-assignment
67 return *this;
68 Position = AI.Position;
69 Type = AI.Type;
70 Father = AI.Father;
71 Mol = AI.Mol;
72 Velocity = AI.Velocity;
73 Id = AI.Id;
74 return *this;
75}
76
Note: See TracBrowser for help on using the repository browser.