source: src/Actions/Makefile.am@ 8f2f4e

Action_Thermostats Add_SelectAtomByNameAction Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_StructOpt_integration_tests AutomationFragmentation_failures Candidate_v1.6.1 ChemicalSpaceEvaluator EmpiricalPotential_contain_HomologyGraph_documentation Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph Fix_Verbose_Codepatterns ForceAnnealing_oldresults ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion Gui_displays_atomic_force_velocity IndependentFragmentGrids_IntegrationTest JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool PythonUI_with_named_parameters Recreated_GuiChecks StoppableMakroAction TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps
Last change on this file since 8f2f4e was 3f6aac, checked in by Frederik Heber <frederik.heber@…>, 8 years ago

Added (Un)selectAtomByName.

  • Descriptor for AtomByName was already present.
  • TESTS: also added regression test.
  • Property mode set to 100644
File size: 33.8 KB
Line 
1# PLEASE adhere to the alphabetical ordering in this Makefile!
2# Also indentation by a single tab
3
4ACTIONSSOURCE = \
5 Actions/Action.cpp \
6 Actions/ActionHistory.cpp \
7 Actions/ActionQueue.cpp \
8 Actions/ActionRegistry.cpp \
9 Actions/ActionSequence.cpp \
10 Actions/ActionStatusList.cpp \
11 Actions/ActionTrait.cpp \
12 Actions/ErrorAction.cpp \
13 Actions/MakroAction.cpp \
14 Actions/ManipulateAtomsProcess.cpp \
15 Actions/MethodAction.cpp \
16 Actions/OptionRegistry.cpp \
17 Actions/OptionTrait.cpp \
18 Actions/Process.cpp \
19 Actions/toCLIString.cpp \
20 Actions/toPythonString.cpp \
21 Actions/UndoRedoHelpers.cpp \
22 Actions/Values.cpp
23
24ACTIONSHEADER = \
25 Actions/Action.hpp \
26 Actions/ActionExceptions.hpp \
27 Actions/Action_impl_header.hpp \
28 Actions/Action_impl_pre.hpp \
29 Actions/Action_impl_undef.hpp \
30 Actions/ActionHistory.hpp \
31 Actions/ActionQueue.hpp \
32 Actions/ActionParameters.hpp \
33 Actions/ActionRegistry.hpp \
34 Actions/ActionSequence.hpp \
35 Actions/ActionState.hpp \
36 Actions/ActionStatusList.hpp \
37 Actions/ActionTrait.hpp \
38 Actions/ActionTraits.hpp \
39 Actions/AtomsCalculation.hpp \
40 Actions/AtomsCalculation_impl.hpp \
41 Actions/Calculation.hpp \
42 Actions/Calculation_impl.hpp \
43 Actions/DryRunAdvocate.hpp \
44 Actions/ErrorAction.hpp \
45 Actions/GlobalListOfActions.hpp \
46 Actions/MakroAction.hpp \
47 Actions/MakroAction_impl_header.hpp \
48 Actions/MakroAction_impl_pre.hpp \
49 Actions/ManipulateAtomsProcess.hpp \
50 Actions/MethodAction.hpp \
51 Actions/OptionRegistry.hpp \
52 Actions/OptionTrait.hpp \
53 Actions/Process.hpp \
54 Actions/toCLIString.hpp \
55 Actions/toPythonString.hpp \
56 Actions/UndoRedoHelpers.hpp \
57 Actions/Values.hpp
58
59ACTIONPROTOTYPESSOURCE = \
60 ${ANALYSISACTIONSOURCE} \
61 ${ATOMACTIONSOURCE} \
62 ${BONDACTIONSOURCE} \
63 ${CMDACTIONSOURCE} \
64 ${FILLACTIONSOURCE} \
65 ${FRAGMENTATIONACTIONSOURCE} \
66 ${GEOMETRYACTIONSOURCE} \
67 ${GRAPHACTIONSOURCE} \
68 ${MOLECULEACTIONSOURCE} \
69 ${PARSERACTIONSOURCE} \
70 ${POTENTIALACTIONSOURCE} \
71 ${RANDONNUMBERSSOURCE} \
72 ${SELECTIONATOMACTIONSOURCE} \
73 ${SELECTIONMOLECULEACTIONSOURCE} \
74 ${SELECTIONSHAPEACTIONSOURCE} \
75 ${SHAPEACTIONSOURCE} \
76 ${TESSELATIONACTIONSOURCE} \
77 $(UNDOACTIONSOURCE) \
78 ${WORLDACTIONSOURCE}
79
80ACTIONPROTOTYPESHEADER = \
81 ${ANALYSISACTIONHEADER} \
82 ${ATOMACTIONHEADER} \
83 ${BONDACTIONHEADER} \
84 ${CMDACTIONHEADER} \
85 ${FILLACTIONHEADER} \
86 ${FRAGMENTATIONACTIONHEADER} \
87 ${GEOMETRYACTIONHEADER} \
88 ${GRAPHACTIONHEADER} \
89 ${MOLECULEACTIONHEADER} \
90 ${PARSERACTIONHEADER} \
91 ${POTENTIALACTIONHEADER} \
92 ${RANDONNUMBERSHEADER} \
93 ${SELECTIONATOMACTIONHEADER} \
94 ${SELECTIONMOLECULEACTIONHEADER} \
95 ${SELECTIONSHAPEACTIONHEADER} \
96 ${SHAPEACTIONHEADER} \
97 ${TESSELATIONACTIONHEADER} \
98 $(UNDOACTIONHEADER) \
99 ${WORLDACTIONHEADER}
100
101ACTIONPROTOTYPESDEFS = \
102 ${ANALYSISACTIONDEFS} \
103 ${ATOMACTIONDEFS} \
104 ${BONDACTIONDEFS} \
105 ${CMDACTIONDEFS} \
106 ${FILLACTIONDEFS} \
107 ${FRAGMENTATIONACTIONDEFS} \
108 ${GEOMETRYACTIONDEFS} \
109 ${GRAPHACTIONDEFS} \
110 ${MOLECULEACTIONDEFS} \
111 ${PARSERACTIONDEFS} \
112 ${POTENTIALACTIONDEFS} \
113 ${RANDONNUMBERSDEFS} \
114 ${SELECTIONATOMACTIONDEFS} \
115 ${SELECTIONMOLECULEACTIONDEFS} \
116 ${SELECTIONSHAPEACTIONDEFS} \
117 ${SHAPEACTIONDEFS} \
118 ${TESSELATIONACTIONDEFS} \
119 $(UNDOACTIONDEFS) \
120 ${WORLDACTIONDEFS}
121
122ANALYSISACTIONSOURCE = \
123 Actions/AnalysisAction/AverageMoleculeForceAction.cpp \
124 Actions/AnalysisAction/DipoleAngularCorrelationAction.cpp \
125 Actions/AnalysisAction/DipoleCorrelationAction.cpp \
126 Actions/AnalysisAction/MolecularVolumeAction.cpp \
127 Actions/AnalysisAction/PairCorrelationAction.cpp \
128 Actions/AnalysisAction/PointCorrelationAction.cpp \
129 Actions/AnalysisAction/PrincipalAxisSystemAction.cpp \
130 Actions/AnalysisAction/SurfaceCorrelationAction.cpp
131ANALYSISACTIONHEADER = \
132 Actions/AnalysisAction/AverageMoleculeForceAction.hpp \
133 Actions/AnalysisAction/DipoleAngularCorrelationAction.hpp \
134 Actions/AnalysisAction/DipoleCorrelationAction.hpp \
135 Actions/AnalysisAction/MolecularVolumeAction.hpp \
136 Actions/AnalysisAction/PairCorrelationAction.hpp \
137 Actions/AnalysisAction/PointCorrelationAction.hpp \
138 Actions/AnalysisAction/PrincipalAxisSystemAction.hpp \
139 Actions/AnalysisAction/SurfaceCorrelationAction.hpp
140ANALYSISACTIONDEFS = \
141 Actions/AnalysisAction/AverageMoleculeForceAction.def \
142 Actions/AnalysisAction/DipoleAngularCorrelationAction.def \
143 Actions/AnalysisAction/DipoleCorrelationAction.def \
144 Actions/AnalysisAction/MolecularVolumeAction.def \
145 Actions/AnalysisAction/PairCorrelationAction.def \
146 Actions/AnalysisAction/PointCorrelationAction.def \
147 Actions/AnalysisAction/PrincipalAxisSystemAction.def \
148 Actions/AnalysisAction/SurfaceCorrelationAction.def
149
150ATOMACTIONSOURCE = \
151 Actions/AtomAction/AddAction.cpp \
152 Actions/AtomAction/ChangeElementAction.cpp \
153 Actions/AtomAction/MirrorAction.cpp \
154 Actions/AtomAction/RandomPerturbationAction.cpp \
155 Actions/AtomAction/RemoveAction.cpp \
156 Actions/AtomAction/RotateAroundOriginByAngleAction.cpp \
157 Actions/AtomAction/SaturateAction.cpp \
158 Actions/AtomAction/SaveSelectedAtomsAction.cpp \
159 Actions/AtomAction/TranslateAction.cpp \
160 Actions/AtomAction/TranslateToOriginAction.cpp
161ATOMACTIONHEADER = \
162 Actions/AtomAction/AddAction.hpp \
163 Actions/AtomAction/ChangeElementAction.hpp \
164 Actions/AtomAction/MirrorAction.hpp \
165 Actions/AtomAction/RemoveAction.hpp \
166 Actions/AtomAction/RandomPerturbationAction.hpp \
167 Actions/AtomAction/RotateAroundOriginByAngleAction.hpp \
168 Actions/AtomAction/SaturateAction.hpp \
169 Actions/AtomAction/SaveSelectedAtomsAction.hpp \
170 Actions/AtomAction/TranslateAction.hpp \
171 Actions/AtomAction/TranslateToOriginAction.hpp
172ATOMACTIONDEFS = \
173 Actions/AtomAction/AddAction.def \
174 Actions/AtomAction/ChangeElementAction.def \
175 Actions/AtomAction/MirrorAction.def \
176 Actions/AtomAction/RandomPerturbationAction.def \
177 Actions/AtomAction/RemoveAction.def \
178 Actions/AtomAction/RotateAroundOriginByAngleAction.def \
179 Actions/AtomAction/SaturateAction.def \
180 Actions/AtomAction/SaveSelectedAtomsAction.def \
181 Actions/AtomAction/TranslateAction.def \
182 Actions/AtomAction/TranslateToOriginAction.def
183
184BONDACTIONSOURCE = \
185 Actions/BondAction/BondAddAction.cpp \
186 Actions/BondAction/BondRemoveAction.cpp \
187 Actions/BondAction/BondSetDegreeAction.cpp
188BONDACTIONHEADER = \
189 Actions/BondAction/BondAddAction.hpp \
190 Actions/BondAction/BondRemoveAction.hpp \
191 Actions/BondAction/BondSetDegreeAction.hpp
192BONDACTIONDEFS = \
193 Actions/BondAction/BondAddAction.def \
194 Actions/BondAction/BondRemoveAction.def \
195 Actions/BondAction/BondSetDegreeAction.def
196
197CMDACTIONSOURCE = \
198 Actions/CommandAction/BondLengthTableAction.cpp \
199 Actions/CommandAction/DryRunAction.cpp \
200 Actions/CommandAction/ElementDbAction.cpp \
201 Actions/CommandAction/FastParsingAction.cpp \
202 Actions/CommandAction/HelpAction.cpp \
203 Actions/CommandAction/HelpRedistributeAction.cpp \
204 Actions/CommandAction/NoDryRunAction.cpp \
205 Actions/CommandAction/StoreSessionAction.cpp \
206 Actions/CommandAction/VerboseAction.cpp \
207 Actions/CommandAction/VersionAction.cpp \
208 Actions/CommandAction/WarrantyAction.cpp
209CMDACTIONHEADER = \
210 Actions/CommandAction/BondLengthTableAction.hpp \
211 Actions/CommandAction/DryRunAction.hpp \
212 Actions/CommandAction/ElementDbAction.hpp \
213 Actions/CommandAction/FastParsingAction.hpp \
214 Actions/CommandAction/HelpAction.hpp \
215 Actions/CommandAction/HelpRedistributeAction.hpp \
216 Actions/CommandAction/NoDryRunAction.hpp \
217 Actions/CommandAction/StoreSessionAction.hpp \
218 Actions/CommandAction/VerboseAction.hpp \
219 Actions/CommandAction/VersionAction.hpp \
220 Actions/CommandAction/WarrantyAction.hpp
221CMDACTIONDEFS = \
222 Actions/CommandAction/BondLengthTableAction.def \
223 Actions/CommandAction/DryRunAction.def \
224 Actions/CommandAction/ElementDbAction.def \
225 Actions/CommandAction/FastParsingAction.def \
226 Actions/CommandAction/HelpAction.def \
227 Actions/CommandAction/HelpRedistributeAction.def \
228 Actions/CommandAction/NoDryRunAction.def \
229 Actions/CommandAction/StoreSessionAction.def \
230 Actions/CommandAction/VerboseAction.def \
231 Actions/CommandAction/VersionAction.def \
232 Actions/CommandAction/WarrantyAction.def
233
234if CONDPYTHON
235CMDACTIONSOURCE += \
236 Actions/CommandAction/LoadSessionAction.cpp
237CMDACTIONHEADER += \
238 Actions/CommandAction/LoadSessionAction.hpp
239CMDACTIONDEFS += \
240 Actions/CommandAction/LoadSessionAction.def
241endif
242
243FILLACTIONSOURCE = \
244 Actions/FillAction/FillRegularGridAction.cpp \
245 Actions/FillAction/FillSurfaceAction.cpp \
246 Actions/FillAction/SuspendInMoleculeAction.cpp \
247 Actions/FillAction/FillVolumeAction.cpp
248FILLACTIONHEADER = \
249 Actions/FillAction/FillRegularGridAction.hpp \
250 Actions/FillAction/FillSurfaceAction.hpp \
251 Actions/FillAction/SuspendInMoleculeAction.hpp \
252 Actions/FillAction/FillVolumeAction.hpp
253FILLACTIONDEFS = \
254 Actions/FillAction/FillRegularGridAction.def \
255 Actions/FillAction/FillSurfaceAction.def \
256 Actions/FillAction/SuspendInMoleculeAction.def \
257 Actions/FillAction/FillVolumeAction.def
258
259
260FRAGMENTATIONACTIONSOURCE = \
261 Actions/FragmentationAction/AnalyseFragmentationResultsAction.cpp \
262 Actions/FragmentationAction/ClearFragmentationResultsAction.cpp \
263 Actions/FragmentationAction/FragmentationAction.cpp \
264 Actions/FragmentationAction/FragmentationAutomationAction.cpp \
265 Actions/FragmentationAction/MolecularDynamicsAction.cpp \
266 Actions/FragmentationAction/ParseFragmentJobsAction.cpp \
267 Actions/FragmentationAction/ParseFragmentResultsAction.cpp \
268 Actions/FragmentationAction/SaveFragmentResultsAction.cpp \
269 Actions/FragmentationAction/StoreSaturatedFragmentAction.cpp \
270 Actions/FragmentationAction/StructuralOptimizationAction.cpp
271FRAGMENTATIONACTIONHEADER = \
272 Actions/FragmentationAction/AnalyseFragmentationResultsAction.hpp \
273 Actions/FragmentationAction/ClearFragmentationResultsAction.hpp \
274 Actions/FragmentationAction/FragmentationAction.hpp \
275 Actions/FragmentationAction/FragmentationAutomationAction.hpp \
276 Actions/FragmentationAction/MolecularDynamicsAction.hpp \
277 Actions/FragmentationAction/ParseFragmentJobsAction.hpp \
278 Actions/FragmentationAction/ParseFragmentResultsAction.hpp \
279 Actions/FragmentationAction/SaveFragmentResultsAction.hpp \
280 Actions/FragmentationAction/StoreSaturatedFragmentAction.hpp \
281 Actions/FragmentationAction/StructuralOptimizationAction.hpp
282FRAGMENTATIONACTIONDEFS = \
283 Actions/FragmentationAction/AnalyseFragmentationResultsAction.def \
284 Actions/FragmentationAction/ClearFragmentationResultsAction.def \
285 Actions/FragmentationAction/FragmentationAction.def \
286 Actions/FragmentationAction/FragmentationAutomationAction.def \
287 Actions/FragmentationAction/MolecularDynamicsAction.def \
288 Actions/FragmentationAction/ParseFragmentJobsAction.def \
289 Actions/FragmentationAction/ParseFragmentResultsAction.def \
290 Actions/FragmentationAction/SaveFragmentResultsAction.def \
291 Actions/FragmentationAction/StoreSaturatedFragmentAction.def \
292 Actions/FragmentationAction/StructuralOptimizationAction.def
293
294GEOMETRYACTIONSOURCE = \
295 Actions/GeometryAction/GeometryDistanceToVectorAction.cpp \
296 Actions/GeometryAction/GeometryInputToVectorAction.cpp \
297 Actions/GeometryAction/GeometryPlaneToVectorAction.cpp \
298 Actions/GeometryAction/GeometryPositionToVectorAction.cpp \
299 Actions/GeometryAction/GeometryRemoveAction.cpp
300GEOMETRYACTIONHEADER = \
301 Actions/GeometryAction/GeometryDistanceToVectorAction.hpp \
302 Actions/GeometryAction/GeometryInputToVectorAction.hpp \
303 Actions/GeometryAction/GeometryPlaneToVectorAction.hpp \
304 Actions/GeometryAction/GeometryPositionToVectorAction.hpp \
305 Actions/GeometryAction/GeometryRemoveAction.hpp
306GEOMETRYACTIONDEFS = \
307 Actions/GeometryAction/GeometryDistanceToVectorAction.def \
308 Actions/GeometryAction/GeometryInputToVectorAction.def \
309 Actions/GeometryAction/GeometryPlaneToVectorAction.def \
310 Actions/GeometryAction/GeometryPositionToVectorAction.def \
311 Actions/GeometryAction/GeometryRemoveAction.def
312
313GRAPHACTIONSOURCE = \
314 Actions/GraphAction/CorrectBondDegreeAction.cpp \
315 Actions/GraphAction/CreateAdjacencyAction.cpp \
316 Actions/GraphAction/DepthFirstSearchAction.cpp \
317 Actions/GraphAction/DestroyAdjacencyAction.cpp \
318 Actions/GraphAction/SubgraphDissectionAction.cpp \
319 Actions/GraphAction/UpdateMoleculesAction.cpp
320GRAPHACTIONHEADER = \
321 Actions/GraphAction/CorrectBondDegreeAction.hpp \
322 Actions/GraphAction/CreateAdjacencyAction.hpp \
323 Actions/GraphAction/DepthFirstSearchAction.hpp \
324 Actions/GraphAction/DestroyAdjacencyAction.hpp \
325 Actions/GraphAction/SubgraphDissectionAction.hpp \
326 Actions/GraphAction/UpdateMoleculesAction.hpp
327GRAPHACTIONDEFS = \
328 Actions/GraphAction/CorrectBondDegreeAction.def \
329 Actions/GraphAction/CreateAdjacencyAction.def \
330 Actions/GraphAction/DepthFirstSearchAction.def \
331 Actions/GraphAction/DestroyAdjacencyAction.def \
332 Actions/GraphAction/SubgraphDissectionAction.def \
333 Actions/GraphAction/UpdateMoleculesAction.def
334
335MOLECULEACTIONSOURCE = \
336 Actions/MoleculeAction/BondFileAction.cpp \
337 Actions/MoleculeAction/ChangeBondAngleAction.cpp \
338 Actions/MoleculeAction/ChangeNameAction.cpp \
339 Actions/MoleculeAction/CopyAction.cpp \
340 Actions/MoleculeAction/ForceAnnealingAction.cpp \
341 Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.cpp \
342 Actions/MoleculeAction/LoadAction.cpp \
343 Actions/MoleculeAction/RemoveAction.cpp \
344 Actions/MoleculeAction/RotateAroundBondAction.cpp \
345 Actions/MoleculeAction/RotateAroundSelfByAngleAction.cpp \
346 Actions/MoleculeAction/RotateToPrincipalAxisSystemAction.cpp \
347 Actions/MoleculeAction/SaveSelectedMoleculesAction.cpp \
348 Actions/MoleculeAction/SaveAdjacencyAction.cpp \
349 Actions/MoleculeAction/SaveBondsAction.cpp \
350 Actions/MoleculeAction/SaveTemperatureAction.cpp \
351 Actions/MoleculeAction/StretchBondAction.cpp \
352 Actions/MoleculeAction/TranslateAction.cpp \
353 Actions/MoleculeAction/VerletIntegrationAction.cpp
354MOLECULEACTIONHEADER = \
355 Actions/MoleculeAction/BondFileAction.hpp \
356 Actions/MoleculeAction/ChangeBondAngleAction.hpp \
357 Actions/MoleculeAction/ChangeNameAction.hpp \
358 Actions/MoleculeAction/CopyAction.hpp \
359 Actions/MoleculeAction/ForceAnnealingAction.hpp \
360 Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.hpp \
361 Actions/MoleculeAction/LoadAction.hpp \
362 Actions/MoleculeAction/RemoveAction.hpp \
363 Actions/MoleculeAction/RotateAroundBondAction.hpp \
364 Actions/MoleculeAction/RotateAroundSelfByAngleAction.hpp \
365 Actions/MoleculeAction/RotateToPrincipalAxisSystemAction.hpp \
366 Actions/MoleculeAction/SaveSelectedMoleculesAction.hpp \
367 Actions/MoleculeAction/SaveAdjacencyAction.hpp \
368 Actions/MoleculeAction/SaveBondsAction.hpp \
369 Actions/MoleculeAction/SaveTemperatureAction.hpp \
370 Actions/MoleculeAction/StretchBondAction.hpp \
371 Actions/MoleculeAction/TranslateAction.hpp \
372 Actions/MoleculeAction/VerletIntegrationAction.hpp
373MOLECULEACTIONDEFS = \
374 Actions/MoleculeAction/BondFileAction.def \
375 Actions/MoleculeAction/ChangeBondAngleAction.def \
376 Actions/MoleculeAction/ChangeNameAction.def \
377 Actions/MoleculeAction/CopyAction.def \
378 Actions/MoleculeAction/ForceAnnealingAction.def \
379 Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.def \
380 Actions/MoleculeAction/LoadAction.def \
381 Actions/MoleculeAction/RemoveAction.def \
382 Actions/MoleculeAction/RotateAroundBondAction.def \
383 Actions/MoleculeAction/RotateAroundSelfByAngleAction.def \
384 Actions/MoleculeAction/RotateToPrincipalAxisSystemAction.def \
385 Actions/MoleculeAction/SaveSelectedMoleculesAction.def \
386 Actions/MoleculeAction/SaveAdjacencyAction.def \
387 Actions/MoleculeAction/SaveBondsAction.def \
388 Actions/MoleculeAction/SaveTemperatureAction.def \
389 Actions/MoleculeAction/StretchBondAction.def \
390 Actions/MoleculeAction/TranslateAction.def \
391 Actions/MoleculeAction/VerletIntegrationAction.def
392
393PARSERACTIONSOURCE = \
394 Actions/ParserAction/SaveSelectedAtomsAsExtTypesAction.cpp \
395 Actions/ParserAction/SetParserParametersAction.cpp \
396 Actions/ParserAction/SetOutputFormatsAction.cpp \
397 Actions/ParserAction/SetTremoloAtomdataAction.cpp
398PARSERACTIONHEADER = \
399 Actions/ParserAction/SaveSelectedAtomsAsExtTypesAction.hpp \
400 Actions/ParserAction/SetParserParametersAction.hpp \
401 Actions/ParserAction/SetOutputFormatsAction.hpp \
402 Actions/ParserAction/SetTremoloAtomdataAction.hpp
403PARSERACTIONDEFS = \
404 Actions/ParserAction/SaveSelectedAtomsAsExtTypesAction.def \
405 Actions/ParserAction/SetParserParametersAction.def \
406 Actions/ParserAction/SetOutputFormatsAction.def \
407 Actions/ParserAction/SetTremoloAtomdataAction.def
408
409POTENTIALACTIONSOURCE = \
410 Actions/PotentialAction/FitPartialChargesAction.cpp \
411 Actions/PotentialAction/ParseAtomFragmentsAction.cpp \
412 Actions/PotentialAction/ParseHomologiesAction.cpp \
413 Actions/PotentialAction/ParseParticleParametersAction.cpp \
414 Actions/PotentialAction/ParsePotentialsAction.cpp \
415 Actions/PotentialAction/SaveAtomFragmentsAction.cpp \
416 Actions/PotentialAction/SaveHomologiesAction.cpp \
417 Actions/PotentialAction/SaveParticleParametersAction.cpp \
418 Actions/PotentialAction/SavePotentialsAction.cpp
419POTENTIALACTIONHEADER = \
420 Actions/PotentialAction/FitPartialChargesAction.hpp \
421 Actions/PotentialAction/ParseAtomFragmentsAction.hpp \
422 Actions/PotentialAction/ParseHomologiesAction.hpp \
423 Actions/PotentialAction/ParseParticleParametersAction.hpp \
424 Actions/PotentialAction/ParsePotentialsAction.hpp \
425 Actions/PotentialAction/SaveAtomFragmentsAction.hpp \
426 Actions/PotentialAction/SaveHomologiesAction.hpp \
427 Actions/PotentialAction/SaveParticleParametersAction.hpp \
428 Actions/PotentialAction/SavePotentialsAction.hpp
429POTENTIALACTIONDEFS = \
430 Actions/PotentialAction/FitPartialChargesAction.def \
431 Actions/PotentialAction/ParseAtomFragmentsAction.def \
432 Actions/PotentialAction/ParseHomologiesAction.def \
433 Actions/PotentialAction/ParseParticleParametersAction.def \
434 Actions/PotentialAction/ParsePotentialsAction.def \
435 Actions/PotentialAction/SaveAtomFragmentsAction.def \
436 Actions/PotentialAction/SaveHomologiesAction.def \
437 Actions/PotentialAction/SaveParticleParametersAction.def \
438 Actions/PotentialAction/SavePotentialsAction.def
439
440if CONDLEVMAR
441POTENTIALACTIONSOURCE += \
442 Actions/PotentialAction/FitCompoundPotentialAction.cpp \
443 Actions/PotentialAction/FitPotentialAction.cpp
444POTENTIALACTIONHEADER += \
445 Actions/PotentialAction/FitCompoundPotentialAction.hpp \
446 Actions/PotentialAction/FitPotentialAction.hpp
447POTENTIALACTIONDEFS += \
448 Actions/PotentialAction/FitCompoundPotentialAction.def \
449 Actions/PotentialAction/FitPotentialAction.def
450endif
451
452RANDONNUMBERSSOURCE =\
453 Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.cpp \
454 Actions/RandomNumbersAction/SetRandomNumbersEngineAction.cpp
455RANDONNUMBERSHEADER =\
456 Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.hpp \
457 Actions/RandomNumbersAction/SetRandomNumbersEngineAction.hpp
458RANDONNUMBERSDEFS =\
459 Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.def \
460 Actions/RandomNumbersAction/SetRandomNumbersEngineAction.def
461
462SELECTIONATOMACTIONSOURCE = \
463 Actions/SelectionAction/Atoms/AllAtomsAction.cpp \
464 Actions/SelectionAction/Atoms/AllAtomsInsideVolumeAction.cpp \
465 Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.cpp \
466 Actions/SelectionAction/Atoms/AtomByElementAction.cpp \
467 Actions/SelectionAction/Atoms/AtomByIdAction.cpp \
468 Actions/SelectionAction/Atoms/AtomByNameAction.cpp \
469 Actions/SelectionAction/Atoms/AtomByOrderAction.cpp \
470 Actions/SelectionAction/Atoms/ClearAllAtomsAction.cpp \
471 Actions/SelectionAction/Atoms/InvertAtomsAction.cpp \
472 Actions/SelectionAction/Atoms/NotAllAtomsAction.cpp \
473 Actions/SelectionAction/Atoms/NotAllAtomsInsideVolumeAction.cpp \
474 Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.cpp \
475 Actions/SelectionAction/Atoms/NotAtomByElementAction.cpp \
476 Actions/SelectionAction/Atoms/NotAtomByIdAction.cpp \
477 Actions/SelectionAction/Atoms/NotAtomByNameAction.cpp \
478 Actions/SelectionAction/Atoms/NotAtomByOrderAction.cpp \
479 Actions/SelectionAction/Atoms/PopAtomsAction.cpp \
480 Actions/SelectionAction/Atoms/PushAtomsAction.cpp
481SELECTIONATOMACTIONHEADER = \
482 Actions/SelectionAction/Atoms/AllAtomsAction.hpp \
483 Actions/SelectionAction/Atoms/AllAtomsInsideVolumeAction.hpp \
484 Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.hpp \
485 Actions/SelectionAction/Atoms/AtomByElementAction.hpp \
486 Actions/SelectionAction/Atoms/AtomByIdAction.hpp \
487 Actions/SelectionAction/Atoms/AtomByNameAction.hpp \
488 Actions/SelectionAction/Atoms/AtomByOrderAction.hpp \
489 Actions/SelectionAction/Atoms/ClearAllAtomsAction.hpp \
490 Actions/SelectionAction/Atoms/InvertAtomsAction.hpp \
491 Actions/SelectionAction/Atoms/NotAllAtomsAction.hpp \
492 Actions/SelectionAction/Atoms/NotAllAtomsInsideVolumeAction.hpp \
493 Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.hpp \
494 Actions/SelectionAction/Atoms/NotAtomByElementAction.hpp \
495 Actions/SelectionAction/Atoms/NotAtomByIdAction.hpp \
496 Actions/SelectionAction/Atoms/NotAtomByNameAction.hpp \
497 Actions/SelectionAction/Atoms/NotAtomByOrderAction.hpp \
498 Actions/SelectionAction/Atoms/PopAtomsAction.hpp \
499 Actions/SelectionAction/Atoms/PushAtomsAction.hpp
500SELECTIONATOMACTIONDEFS = \
501 Actions/SelectionAction/Atoms/AllAtomsAction.def \
502 Actions/SelectionAction/Atoms/AllAtomsInsideVolumeAction.def \
503 Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.def \
504 Actions/SelectionAction/Atoms/AtomByElementAction.def \
505 Actions/SelectionAction/Atoms/AtomByIdAction.def \
506 Actions/SelectionAction/Atoms/AtomByNameAction.def \
507 Actions/SelectionAction/Atoms/AtomByOrderAction.def \
508 Actions/SelectionAction/Atoms/ClearAllAtomsAction.def \
509 Actions/SelectionAction/Atoms/InvertAtomsAction.def \
510 Actions/SelectionAction/Atoms/NotAllAtomsAction.def \
511 Actions/SelectionAction/Atoms/NotAllAtomsInsideVolumeAction.def \
512 Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.def \
513 Actions/SelectionAction/Atoms/NotAtomByElementAction.def \
514 Actions/SelectionAction/Atoms/NotAtomByIdAction.def \
515 Actions/SelectionAction/Atoms/NotAtomByNameAction.def \
516 Actions/SelectionAction/Atoms/NotAtomByOrderAction.def \
517 Actions/SelectionAction/Atoms/PopAtomsAction.def \
518 Actions/SelectionAction/Atoms/PushAtomsAction.def
519
520SELECTIONMOLECULEACTIONSOURCE = \
521 Actions/SelectionAction/Molecules/AllMoleculesAction.cpp \
522 Actions/SelectionAction/Molecules/ClearAllMoleculesAction.cpp \
523 Actions/SelectionAction/Molecules/InvertMoleculesAction.cpp \
524 Actions/SelectionAction/Molecules/MoleculeByFormulaAction.cpp \
525 Actions/SelectionAction/Molecules/MoleculeByIdAction.cpp \
526 Actions/SelectionAction/Molecules/MoleculeByNameAction.cpp \
527 Actions/SelectionAction/Molecules/MoleculeByOrderAction.cpp \
528 Actions/SelectionAction/Molecules/MoleculeOfAtomAction.cpp \
529 Actions/SelectionAction/Molecules/NotAllMoleculesAction.cpp \
530 Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.cpp \
531 Actions/SelectionAction/Molecules/NotMoleculeByIdAction.cpp \
532 Actions/SelectionAction/Molecules/NotMoleculeByNameAction.cpp \
533 Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.cpp \
534 Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.cpp \
535 Actions/SelectionAction/Molecules/PopMoleculesAction.cpp \
536 Actions/SelectionAction/Molecules/PushMoleculesAction.cpp
537SELECTIONMOLECULEACTIONHEADER = \
538 Actions/SelectionAction/Molecules/AllMoleculesAction.hpp \
539 Actions/SelectionAction/Molecules/ClearAllMoleculesAction.hpp \
540 Actions/SelectionAction/Molecules/InvertMoleculesAction.hpp \
541 Actions/SelectionAction/Molecules/MoleculeByFormulaAction.hpp \
542 Actions/SelectionAction/Molecules/MoleculeByIdAction.hpp \
543 Actions/SelectionAction/Molecules/MoleculeByNameAction.hpp \
544 Actions/SelectionAction/Molecules/MoleculeByOrderAction.hpp \
545 Actions/SelectionAction/Molecules/MoleculeOfAtomAction.hpp \
546 Actions/SelectionAction/Molecules/NotAllMoleculesAction.hpp \
547 Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.hpp \
548 Actions/SelectionAction/Molecules/NotMoleculeByIdAction.hpp \
549 Actions/SelectionAction/Molecules/NotMoleculeByNameAction.hpp \
550 Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.hpp \
551 Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.hpp \
552 Actions/SelectionAction/Molecules/PopMoleculesAction.hpp \
553 Actions/SelectionAction/Molecules/PushMoleculesAction.hpp
554SELECTIONMOLECULEACTIONDEFS = \
555 Actions/SelectionAction/Molecules/AllMoleculesAction.def \
556 Actions/SelectionAction/Molecules/ClearAllMoleculesAction.def \
557 Actions/SelectionAction/Molecules/InvertMoleculesAction.def \
558 Actions/SelectionAction/Molecules/MoleculeByFormulaAction.def \
559 Actions/SelectionAction/Molecules/MoleculeByIdAction.def \
560 Actions/SelectionAction/Molecules/MoleculeByNameAction.def \
561 Actions/SelectionAction/Molecules/MoleculeByOrderAction.def \
562 Actions/SelectionAction/Molecules/MoleculeOfAtomAction.def \
563 Actions/SelectionAction/Molecules/NotAllMoleculesAction.def \
564 Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.def \
565 Actions/SelectionAction/Molecules/NotMoleculeByIdAction.def \
566 Actions/SelectionAction/Molecules/NotMoleculeByNameAction.def \
567 Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.def \
568 Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.def \
569 Actions/SelectionAction/Molecules/PopMoleculesAction.def \
570 Actions/SelectionAction/Molecules/PushMoleculesAction.def
571
572SELECTIONSHAPEACTIONSOURCE = \
573 Actions/SelectionAction/Shapes/AllShapesAction.cpp \
574 Actions/SelectionAction/Shapes/ShapeByNameAction.cpp \
575 Actions/SelectionAction/Shapes/NotAllShapesAction.cpp \
576 Actions/SelectionAction/Shapes/NotShapeByNameAction.cpp
577SELECTIONSHAPEACTIONHEADER = \
578 Actions/SelectionAction/Shapes/AllShapesAction.hpp \
579 Actions/SelectionAction/Shapes/ShapeByNameAction.hpp \
580 Actions/SelectionAction/Shapes/NotAllShapesAction.hpp \
581 Actions/SelectionAction/Shapes/NotShapeByNameAction.hpp
582SELECTIONSHAPEACTIONDEFS = \
583 Actions/SelectionAction/Shapes/AllShapesAction.def \
584 Actions/SelectionAction/Shapes/ShapeByNameAction.def \
585 Actions/SelectionAction/Shapes/NotAllShapesAction.def \
586 Actions/SelectionAction/Shapes/NotShapeByNameAction.def
587
588SHAPEACTIONSOURCE = \
589 Actions/ShapeAction/CombineShapesAction.cpp \
590 Actions/ShapeAction/CreateShapeAction.cpp \
591 Actions/ShapeAction/RemoveShapeAction.cpp \
592 Actions/ShapeAction/RotateShapeAction.cpp \
593 Actions/ShapeAction/StretchShapeAction.cpp \
594 Actions/ShapeAction/TranslateShapeAction.cpp
595SHAPEACTIONHEADER = \
596 Actions/ShapeAction/CombineShapesAction.hpp \
597 Actions/ShapeAction/CreateShapeAction.hpp \
598 Actions/ShapeAction/RemoveShapeAction.hpp \
599 Actions/ShapeAction/RotateShapeAction.hpp \
600 Actions/ShapeAction/StretchShapeAction.hpp \
601 Actions/ShapeAction/TranslateShapeAction.hpp
602SHAPEACTIONDEFS = \
603 Actions/ShapeAction/CombineShapesAction.def \
604 Actions/ShapeAction/CreateShapeAction.def \
605 Actions/ShapeAction/RemoveShapeAction.def \
606 Actions/ShapeAction/RotateShapeAction.def \
607 Actions/ShapeAction/StretchShapeAction.def \
608 Actions/ShapeAction/TranslateShapeAction.def
609
610TESSELATIONACTIONSOURCE = \
611 Actions/TesselationAction/ConvexEnvelopeAction.cpp \
612 Actions/TesselationAction/NonConvexEnvelopeAction.cpp
613TESSELATIONACTIONHEADER = \
614 Actions/TesselationAction/ConvexEnvelopeAction.hpp \
615 Actions/TesselationAction/NonConvexEnvelopeAction.hpp
616TESSELATIONACTIONDEFS = \
617 Actions/TesselationAction/ConvexEnvelopeAction.def \
618 Actions/TesselationAction/NonConvexEnvelopeAction.def
619
620UNDOACTIONSOURCE = \
621 Actions/RedoAction.cpp \
622 Actions/UndoAction.cpp
623UNDOACTIONHEADER = \
624 Actions/RedoAction.hpp \
625 Actions/UndoAction.hpp
626UNDOACTIONDEFS = \
627 Actions/RedoAction.def \
628 Actions/UndoAction.def
629
630
631WORLDACTIONSOURCE = \
632 Actions/WorldAction/AddEmptyBoundaryAction.cpp \
633 Actions/WorldAction/BoundInBoxAction.cpp \
634 Actions/WorldAction/CenterInBoxAction.cpp \
635 Actions/WorldAction/CenterOnEdgeAction.cpp \
636 Actions/WorldAction/ChangeBoxAction.cpp \
637 Actions/WorldAction/InputAction.cpp \
638 Actions/WorldAction/OutputAction.cpp \
639 Actions/WorldAction/OutputAsAction.cpp \
640 Actions/WorldAction/RepeatBoxAction.cpp \
641 Actions/WorldAction/ScaleBoxAction.cpp \
642 Actions/WorldAction/SetBoundaryConditionsAction.cpp \
643 Actions/WorldAction/SetDefaultNameAction.cpp \
644 Actions/WorldAction/SetWorldTimeAction.cpp \
645 Actions/WorldAction/StepWorldTimeAction.cpp
646WORLDACTIONHEADER = \
647 Actions/WorldAction/AddEmptyBoundaryAction.hpp \
648 Actions/WorldAction/BoundInBoxAction.hpp \
649 Actions/WorldAction/CenterInBoxAction.hpp \
650 Actions/WorldAction/CenterOnEdgeAction.hpp \
651 Actions/WorldAction/ChangeBoxAction.hpp \
652 Actions/WorldAction/InputAction.hpp \
653 Actions/WorldAction/OutputAction.hpp \
654 Actions/WorldAction/OutputAsAction.hpp \
655 Actions/WorldAction/RepeatBoxAction.hpp \
656 Actions/WorldAction/ScaleBoxAction.hpp \
657 Actions/WorldAction/SetBoundaryConditionsAction.hpp \
658 Actions/WorldAction/SetDefaultNameAction.hpp \
659 Actions/WorldAction/SetWorldTimeAction.hpp \
660 Actions/WorldAction/StepWorldTimeAction.hpp
661WORLDACTIONDEFS = \
662 Actions/WorldAction/AddEmptyBoundaryAction.def \
663 Actions/WorldAction/BoundInBoxAction.def \
664 Actions/WorldAction/CenterInBoxAction.def \
665 Actions/WorldAction/CenterOnEdgeAction.def \
666 Actions/WorldAction/ChangeBoxAction.def \
667 Actions/WorldAction/InputAction.def \
668 Actions/WorldAction/OutputAction.def \
669 Actions/WorldAction/OutputAsAction.def \
670 Actions/WorldAction/RepeatBoxAction.def \
671 Actions/WorldAction/ScaleBoxAction.def \
672 Actions/WorldAction/SetBoundaryConditionsAction.def \
673 Actions/WorldAction/SetDefaultNameAction.def \
674 Actions/WorldAction/SetWorldTimeAction.def \
675 Actions/WorldAction/StepWorldTimeAction.def
676
677#ACTIONPYTHONSOURCE_WITHDIR = $(ACTIONPROTOTYPESSOURCE:Action.cpp=Action.python.cpp)
678#ACTIONPYTHONSOURCE = $(notdir $(ACTIONPYTHONSOURCE_WITHDIR))
679
680noinst_LTLIBRARIES += \
681 libMolecuilderActions.la \
682 libMolecuilderActionPrototypes.la
683# libMolecuilderActionPython.la
684libMolecuilderActionPrototypes_la_CPPFLAGS = $(AM_CPPFLAGS)
685if CONDJOBMARKET
686libMolecuilderActionPrototypes_la_CPPFLAGS += $(JobMarket_CFLAGS)
687endif
688if CONDLEVMAR
689libMolecuilderActionPrototypes_la_CPPFLAGS += $(LEVMAR_CPPFLAGS)
690endif
691libMolecuilderActions_la_includedir = $(includedir)/MoleCuilder/
692libMolecuilderActionPrototypes_la_includedir = $(includedir)/MoleCuilder/
693#libMolecuilderActionPython_la_includedir = $(includedir)/MoleCuilder/
694
695BUILT_SOURCES += AllActionHeaders.hpp
696if CONDPYTHON
697BUILT_SOURCES += AllActionPython.hpp
698endif
699#$(ACTIONPYTHONSOURCE)
700
701# UIElements/libMolecuilderUI.la
702nobase_libMolecuilderActions_la_include_HEADERS = ${ACTIONSHEADER}
703nobase_libMolecuilderActionPrototypes_la_include_HEADERS = ${ACTIONPROTOTYPESHEADER} ${ACTIONPROTOTYPESDEFS}
704nodist_libMolecuilderActionPrototypes_la_include_HEADERS = AllActionHeaders.hpp
705#nobase_libMolecuilderActionPython_la_include_HEADERS = ${ACTIONPROTOTYPESHEADER} ${ACTIONPROTOTYPESDEFS}
706#nodist_libMolecuilderActionPython_la_include_HEADERS = AllActionHeaders.hpp
707
708## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
709## target. Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
710## will therefore be treated as if it were literally part of the target name,
711## and the variable name derived from that.
712## The file extension .cc is recognized by Automake, and makes it produce
713## rules which invoke the C++ compiler to produce a libtool object file (.lo)
714## from each source file. Note that it is not necessary to list header files
715## which are already listed elsewhere in a _HEADERS variable assignment.
716libMolecuilderActions_la_SOURCES = ${ACTIONSSOURCE}
717libMolecuilderActionPrototypes_la_SOURCES = ${ACTIONPROTOTYPESSOURCE}
718#libMolecuilderActionPython_la_SOURCES = ${ACTIONPYTHONSOURCE}
719
720## Instruct libtool to include ABI version information in the generated shared
721## library file (.so). The library ABI version is defined in configure.ac, so
722## that all version information is kept in one place.
723#libMolecuilderActions_la_LDFLAGS = -version-info $(MOLECUILDER_SO_VERSION)
724
725## The generated configuration header is installed in its own subdirectory of
726## $(libdir). The reason for this is that the configuration information put
727## into this header file describes the target platform the installed library
728## has been built for. Thus the file must not be installed into a location
729## intended for architecture-independent files, as defined by the Filesystem
730## Hierarchy Standard (FHS).
731## The nodist_ prefix instructs Automake to not generate rules for including
732## the listed files in the distribution on 'make dist'. Files that are listed
733## in _HEADERS variables are normally included in the distribution, but the
734## configuration header file is generated at configure time and should not be
735## shipped with the source tarball.
736#libMolecuilderActions_libincludedir = $(libdir)/MoleCuilder/include
737#nodist_libMolecuilderActions_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h
738
739## Install the generated pkg-config file (.pc) into the expected location for
740## architecture-dependent package configuration information. Occasionally,
741## pkg-config files are also used for architecture-independent data packages,
742## in which case the correct install location would be $(datadir)/pkgconfig.
743#pkgconfigdir = $(libdir)/pkgconfig
744#pkgconfig_DATA = $(top_builddir)/MoleCuilder.pc
745
746#SUFFIXES = .pytho n.cpp
747#.python.cpp: $*.def
748# echo "#include \"$<\"" >$@; \
749# echo "#include \"Actions/Action_impl_python.hpp\"" >>$@; \
750# echo "#include \"Actions/Action_impl_undef.hpp\"" >>$@;
751
752AllActionHeaders.hpp: $(ACTIONPROTOTYPESHEADER) Actions/GlobalListOfActions.hpp
753 echo "#ifndef ALLACTIONHEADERS_HPP_" >$@; \
754 echo "#define ALLACTIONHEADERS_HPP_" >>$@; \
755 for file in $(ACTIONPROTOTYPESHEADER); do \
756 echo "#include \"$$file\"" >>$@; \
757 done; \
758 echo "#endif /* ALLACTIONHEADERS_HPP_ */" >>$@;
759
760MOSTLYCLEANFILES += \
761 AllActionHeaders.hpp
762
763if CONDPYTHON
764AllActionPython.hpp: $(ACTIONPROTOTYPESHEADER) Actions/GlobalListOfActions.hpp
765 echo "#ifndef ALLACTIONPYTHON_HPP_" >$@; \
766 echo "#define ALLACTIONPYTHON_HPP_" >>$@; \
767 for file in $(ACTIONPROTOTYPESHEADER); do \
768 if test "$$file" != "Actions/CommandAction/LoadSessionAction.hpp"; then \
769 echo "#include \"`echo $$file | sed -e 's/hpp/def/'`\"" >>$@; \
770 echo "#include \"Actions/Action_impl_python.hpp\"" >>$@; \
771 echo "#include \"Actions/Action_impl_undef.hpp\"" >>$@; \
772 fi; \
773 done; \
774 echo "#endif /* ALLACTIONPYTHON_HPP_ */" >>$@;
775
776MOSTLYCLEANFILES += \
777 AllActionPython.hpp
778
779endif
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