#
# ChangeLog for src/Parameters/Specifics/Value_molecule.cpp
#
# Generated by Trac 1.4.4
# Mar 23, 2025, 6:11:23 PM

Fri, 24 Jul 2015 16:44:34 GMT Frederik Heber <heber@…> [f01769]
	* src/Actions/AtomAction/ChangeElementAction.cpp (modified)
	* src/Actions/FillAction/FillRegularGridAction.cpp (modified)
	* src/Actions/FillAction/FillSurfaceAction.cpp (modified)
	* src/Actions/FillAction/SuspendInMoleculeAction.cpp (modified)
	* src/Actions/MoleculeAction/RemoveAction.cpp (modified)
	* src/Actions/SelectionAction/Atoms/AtomByIdAction.cpp (modified)
	* src/Actions/SelectionAction/Atoms/AtomByOrderAction.cpp (modified)
	* src/Actions/SelectionAction/Atoms/NotAtomByIdAction.cpp (modified)
	* src/Actions/SelectionAction/Atoms/NotAtomByOrderAction.cpp (modified)
	* src/Actions/TesselationAction/ConvexEnvelopeAction.cpp (modified)
	* src/Actions/WorldAction/RepeatBoxAction.cpp (modified)
	* src/Actions/WorldAction/RepeatBoxAction.def (modified)
	* src/Analysis/analysis_bonds.cpp (modified)
	* src/Analysis/analysis_correlation.cpp (modified)
	* src/Atom/AtomSet.hpp (modified)
	* src/Atom/atom_bondedparticle.cpp (modified)
	* src/Atom/atom_bondedparticle.hpp (modified)
	* src/AtomIdSet.cpp (modified)
	* src/AtomIdSet.hpp (modified)
	* src/Bond/BondInfo.cpp (modified)
	* src/Descriptors/unittests/AtomDescriptorUnitTest.cpp (modified)
	* src/Filling/unittests/ClusterUnitTest.cpp (modified)
	* src/Fragmentation/Fragmentation.cpp (modified)
	* src/Fragmentation/Graph.cpp (modified)
	* src/Fragmentation/Homology/HomologyGraph_getFromKeyset.cpp (modified)
	* src/Graph/AdjacencyList.cpp (modified)
	* src/Graph/BuildInducedSubgraph.cpp (modified)
	* src/Graph/BuildInducedSubgraph.hpp (modified)
	* src/Parameters/Specifics/Value_molecule.cpp (modified)
	* src/Parameters/StreamOperators.hpp (modified)
	* src/Parameters/Validators/Specific/AtomIdValidator.cpp (modified)
	* src/Parser/PdbParser.cpp (modified)
	* src/Parser/unittests/ParserTremoloUnitTest.cpp (modified)
	* src/Tesselation/boundary.cpp (modified)
	* src/UIElements/CommandLineUI/Query/AtomCommandLineQuery.cpp (modified)
	* src/UIElements/CommandLineUI/Query/AtomsCommandLineQuery.cpp (modified)
	* src/UIElements/CommandLineUI/Query/MoleculeCommandLineQuery.cpp (modified)
	* src/UIElements/Qt4/Query/AtomQtQuery.cpp (modified)
	* src/UIElements/Qt4/Query/MoleculeQtQuery.cpp (modified)
	* src/UIElements/TextUI/Query/AtomTextQuery.cpp (modified)
	* src/UIElements/TextUI/Query/AtomsTextQuery.cpp (modified)
	* src/UIElements/TextUI/Query/MoleculeTextQuery.cpp (modified)
	* src/UIElements/TextUI/Query/MoleculesTextQuery.cpp (modified)
	* src/UIElements/Views/Qt4/Qt3D/GLMoleculeObject_atom.cpp (modified)
	* src/UIElements/Views/Qt4/Qt3D/GLMoleculeObject_bond.cpp (modified)
	* src/UIElements/Views/Qt4/Qt3D/GLMoleculeObject_molecule.cpp (modified)
	* src/UIElements/Views/Qt4/Qt3D/GLWorldScene.cpp (modified)
	* src/UIElements/Views/Qt4/QtFragmentList.cpp (modified)
	* src/molecule.cpp (modified)
	* src/molecule.hpp (modified)
	* src/molecule_geometry.cpp (modified)
	* src/moleculelist.cpp (modified)
	* src/unittests/AtomIdSetUnitTest.cpp (modified)

	Replaced World::getAtom() wherever possible by const version.

	- ...


Fri, 24 Jul 2015 16:44:34 GMT Frederik Heber <heber@…> [1259df]
	* src/Actions/FillAction/FillVolumeAction.cpp (modified)
	* src/Actions/FillAction/SuspendInMoleculeAction.cpp (modified)
	* src/Actions/GraphAction/CreateAdjacencyAction.cpp (modified)
	* src/Actions/GraphAction/UpdateMoleculesAction.cpp (modified)
	* src/Actions/SelectionAction/Molecules/MoleculeByFormulaAction.cpp (modified)
	* src/Actions/SelectionAction/Molecules/MoleculeByFormulaAction.def (modified)
	* src/Actions/SelectionAction/Molecules/MoleculeByNameAction.cpp (modified)
	* src/Actions/SelectionAction/Molecules/MoleculeByNameAction.def (modified)
	* src/Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.cpp (modified)
	* src/Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.def (modified)
	* src/Actions/SelectionAction/Molecules/NotMoleculeByNameAction.cpp (modified)
	* src/Actions/SelectionAction/Molecules/NotMoleculeByNameAction.def (modified)
	* src/Actions/WorldAction/BoundInBoxAction.cpp (modified)
	* src/Actions/WorldAction/CenterInBoxAction.cpp (modified)
	* src/Actions/WorldAction/RepeatBoxAction.cpp (modified)
	* src/Actions/WorldAction/RepeatBoxAction.def (modified)
	* src/Descriptors/unittests/MoleculeDescriptorUnitTest.cpp (modified)
	* src/Parameters/Specifics/Value_molecule.cpp (modified)
	* src/UIElements/Qt4/Query/MoleculeQtQuery.cpp (modified)
	* src/UIElements/Views/Qt4/MoleculeList/QtMoleculeList.cpp (modified)
	* src/UIElements/Views/Qt4/MoleculeList/QtMoleculeListView.cpp (modified)
	* src/UIElements/Views/Qt4/Qt3D/GLWorldScene.cpp (modified)

	Replaced World::getAllMolecules() wherever possible by const version.


Thu, 11 Sep 2014 07:20:26 GMT Frederik Heber <heber@…> [f8bccc]
	* src/Parameters/Makefile.am (modified)
	* src/Parameters/Specifics/Value_atom.cpp (added)
	* src/Parameters/Specifics/Value_atom.hpp (added)
	* src/Parameters/Specifics/Value_element.cpp (added)
	* src/Parameters/Specifics/Value_element.hpp (added)
	* src/Parameters/Specifics/Value_molecule.cpp (added)
	* src/Parameters/Specifics/Value_molecule.hpp (added)
	* src/Parameters/Specifics/Value_string.cpp (moved)
	* src/Parameters/Specifics/Value_string.hpp (moved)
	* src/Parameters/Value.hpp (modified)
	* src/UIElements/Qt4/Query/FileQtQuery.cpp (modified)

	FIX: QtQueryList now works with pointers, FileQtQuery gives name of ...