# # ChangeLog for src/Dynamics/ForceAnnealing.hpp # # Generated by Trac 1.6 # Jun 20, 2025, 4:12:39 AM Thu, 20 Jul 2017 09:38:38 GMT Frederik Heber [cb80d4] * src/Dynamics/BondVectors.cpp (modified) * src/Dynamics/BondVectors.hpp (modified) * src/Dynamics/ForceAnnealing.hpp (modified) Extracted calculation of weights per atom into BondVectors. Thu, 20 Jul 2017 09:38:38 GMT Frederik Heber [461a7f] * src/Dynamics/BondVectors.cpp (modified) * src/Dynamics/BondVectors.hpp (modified) * src/Dynamics/BondVectors_impl.hpp (modified) * src/Dynamics/ForceAnnealing.hpp (modified) BondVectors now return subset of BondVectors for a given atom. - ... Thu, 20 Jul 2017 09:38:38 GMT Frederik Heber [698308] * src/Dynamics/ForceAnnealing.hpp (modified) Fixing annealWithBondgraph(). Thu, 20 Jul 2017 09:38:38 GMT Frederik Heber [b7fe6e] * src/Dynamics/ForceAnnealing.hpp (modified) ForceAnnealing::anneal() now only once reduces deltat. Thu, 20 Jul 2017 09:38:38 GMT Frederik Heber [3a5de5] * src/Actions/FragmentationAction/AnalyseFragmentationResultsAction.cpp (modified) * src/Dynamics/ForceAnnealing.hpp (modified) ForceAnnealing no longer resets forces, AnalyseFragmentResults now ... Thu, 20 Jul 2017 09:38:38 GMT Frederik Heber [6dfa37] * src/Actions/MoleculeAction/ForceAnnealingAction.cpp (modified) * src/Actions/MoleculeAction/ForceAnnealingAction.def (modified) * src/Dynamics/ForceAnnealing.hpp (modified) ForceAnnealing accepts option deltat. Thu, 20 Jul 2017 09:38:38 GMT Frederik Heber [6d360a] * src/Actions/MoleculeAction/ForceAnnealingAction.cpp (modified) * src/Actions/MoleculeAction/ForceAnnealingAction.def (modified) * src/Dynamics/ForceAnnealing.hpp (modified) * tests/Python/AllActions/options.dat (modified) ForceAnnealing can now be used either atom- or bond-centered. - new ... Thu, 20 Jul 2017 09:38:37 GMT Frederik Heber [4cd46b] * src/Dynamics/ForceAnnealing.hpp (modified) ForceAnnealing now uses BondVectors to optimize the structure from ... Thu, 20 Jul 2017 09:38:37 GMT Frederik Heber [57092a] * src/Dynamics/ForceAnnealing.hpp (modified) ForceAnnealing now calculates force on either side of bond in ... Thu, 20 Jul 2017 09:38:37 GMT Frederik Heber [ab7bfa6] * src/Dynamics/ForceAnnealing.hpp (modified) ForceAnnealing converts atomic forces to bond forces and optimize ... Thu, 20 Jul 2017 09:38:37 GMT Frederik Heber [539845] * src/Actions/MoleculeAction/ForceAnnealingAction.cpp (modified) * src/Actions/MoleculeAction/ForceAnnealingAction.def (modified) * src/Dynamics/ForceAnnealing.hpp (modified) * tests/Python/AllActions/options.dat (modified) Added damping-factor as another option to ForceAnnealing for proper ... Thu, 20 Jul 2017 09:38:37 GMT Frederik Heber [58787b] * src/Actions/MoleculeAction/ForceAnnealingAction.cpp (modified) * src/Actions/MoleculeAction/ForceAnnealingAction.def (modified) * src/Dynamics/ForceAnnealing.hpp (modified) * tests/Python/AllActions/options.dat (modified) ForceAnnealing now shifts atoms in the bond graph to anneal forces, too. Thu, 20 Jul 2017 09:38:25 GMT Frederik Heber [7d2364] * doc/userguide/userguide.xml (modified) * src/Actions/MoleculeAction/ForceAnnealingAction.cpp (modified) * src/Actions/MoleculeAction/ForceAnnealingAction.def (modified) * src/Dynamics/ForceAnnealing.hpp (modified) * tests/GuiChecks/Molecules/ForceAnnealing/testsuite-molecules-force-annealing.at (modified) * tests/regression/Molecules/ForceAnnealing/testsuite-molecules-force-annealing.at (modified) ForceAnnealing now uses step width according to Barzilai-Borwein ... Thu, 20 Jul 2017 09:38:25 GMT Frederik Heber [f49361] * src/Dynamics/ForceAnnealing.hpp (modified) Added reset() function to ForceAnnealing. Wed, 20 Aug 2014 12:58:30 GMT Frederik Heber [7f833c] * src/Dynamics/ForceAnnealing.hpp (modified) Giving the maximum components over all force vectors in ForceAnnealing. Wed, 20 Aug 2014 12:58:30 GMT Frederik Heber [1a48d2] * src/Actions/AtomAction/RemoveAction.def (modified) * src/Actions/GlobalListOfActions.hpp (modified) * src/Actions/Makefile.am (modified) * src/Actions/MoleculeAction/ForceAnnealingAction.cpp (added) * src/Actions/MoleculeAction/ForceAnnealingAction.def (added) * src/Actions/MoleculeAction/ForceAnnealingAction.hpp (added) * src/Actions/MoleculeAction/VerletIntegrationAction.cpp (modified) * src/Dynamics/ForceAnnealing.hpp (added) * src/Makefile.am (modified) * tests/regression/Makefile.am (modified) * tests/regression/Molecules/ForceAnnealing/post/test-undo.conf (added) * tests/regression/Molecules/ForceAnnealing/post/test.conf (added) * tests/regression/Molecules/ForceAnnealing/pre/test.conf (added) * tests/regression/Molecules/ForceAnnealing/pre/test.forces (added) * tests/regression/Molecules/ForceAnnealing/testsuite-molecules-force-annealing.at (added) * tests/regression/Molecules/testsuite-molecules.at (modified) Added ForceAnnealingAction. - also added regression test. - ...