#ACLOCAL_AMFLAGS = -I m4
SUBDIRS = doc tests

bin_PROGRAMS = \
	average \
	CreateGaAs \
	CreateH2 \
	GetPdb \
	NanoCreator \
	ReadSrcIon \
	stochastik \
	VibrAlyzer	

GetPdb_SOURCES = GetPdb.c mergesort.c mergesort.h
stochastik_SOURCES = stochastik.cpp
NanoCreator_SOURCES = NanoCreator.c NanoCreator.h
average_SOURCES = average.cpp
VibrAlyzer_SOURCES = VibrAlyzer.c

scripts = \
	average_result.sh \
	CreateFromXYZ.sh \
	config2xyz.sh \
	convert2old.sh \
	convertpdb.sh \
	dynamicANOVA.sh	\
	gather_result.sh \
	gather_all_results.sh \
	grep_shielding.sh \
	gather_averaged_results.sh \
	meas2pdb.sh \
	Nanotubes.pl \
	ReSequenceDX.pl

bin_SCRIPTS = ${scripts}

average_CFLAGS = -march=nocona -Wall -DBIGENDIAN=0
CreateGaAs_CFLAGS = -march=nocona -Wall -DBIGENDIAN=0
CreateH2_CFLAGS = -march=nocona -Wall -DBIGENDIAN=0
GetPdb_CFLAGS = -march=nocona -Wall -DBIGENDIAN=0
ReadSrcIon_CFLAGS = -march=nocona -Wall -DBIGENDIAN=0
stochastik_CFLAGS = -march=nocona -Wall -DBIGENDIAN=0
NanoCreator_CFLAGS = -march=nocona -Wall -DBIGENDIAN=0
VibrAlyzer_CFLAGS = -march=nocona -Wall -DBIGENDIAN=0