# PLEASE adhere to the alphabetical ordering in this Makefile!
# Also indentation by a single tab

INCLUDES = -I$(top_srcdir)/src

AM_LDFLAGS = $(CPPUNIT_LIBS) -ldl
AM_CXXFLAGS = $(CPPUNIT_CFLAGS)

ACTIONSSOURCE = \
  ${ANALYSISACTIONSOURCE} \
  ${ATOMACTIONSOURCE} \
  ${CMDACTIONSOURCE} \
  ${FRAGMENTATIONACTIONSOURCE} \
  ${MOLECULEACTIONSOURCE} \
  ${PARSERACTIONSOURCE} \
  ${SELECTIONACTIONSOURCE} \
  ${TESSELATIONACTIONSOURCE} \
  ${WORLDACTIONSOURCE} \
  ActionTraits.cpp \
  MapOfActions.cpp \
  ValueStorage.cpp

ACTIONSHEADER = \
  ${ANALYSISACTIONHEADER} \
  ${ATOMACTIONHEADER} \
  ${CMDACTIONHEADER} \
  ${FRAGMENTATIONACTIONHEADER} \
  ${MOLECULEACTIONHEADER} \
  ${PARSERACTIONHEADER} \
  ${SELECTIONACTIONHEADER} \
  ${TESSELATIONACTIONHEADER} \
  ${WORLDACTIONHEADER} \
  ActionTraits.hpp \
  MapOfActions.hpp \
  ValueStorage.hpp \
  Values.hpp
  
ANALYSISACTIONSOURCE = \
  AnalysisAction/MolecularVolumeAction.cpp \
  AnalysisAction/PairCorrelationAction.cpp \
  AnalysisAction/PointCorrelationAction.cpp \
  AnalysisAction/PrincipalAxisSystemAction.cpp \
  AnalysisAction/SurfaceCorrelationAction.cpp
ANALYSISACTIONHEADER = \
  AnalysisAction/MolecularVolumeAction.hpp \
  AnalysisAction/PairCorrelationAction.hpp \
  AnalysisAction/PointCorrelationAction.hpp \
  AnalysisAction/PrincipalAxisSystemAction.hpp \
  AnalysisAction/SurfaceCorrelationAction.hpp

ATOMACTIONSOURCE = \
  AtomAction/AddAction.cpp \
  AtomAction/ChangeElementAction.cpp \
  AtomAction/RemoveAction.cpp \
  AtomAction/RotateAroundOriginByAngleAction.cpp \
  AtomAction/TranslateAction.cpp
ATOMACTIONHEADER = \
  AtomAction/AddAction.hpp \
  AtomAction/ChangeElementAction.hpp \
  AtomAction/RemoveAction.cpp \
  AtomAction/RotateAroundOriginByAngleAction.hpp \
  AtomAction/TranslateAction.hpp

CMDACTIONSOURCE = \
  CommandAction/BondLengthTableAction.cpp \
  CommandAction/ElementDbAction.cpp \
  CommandAction/FastParsingAction.cpp \
  CommandAction/HelpAction.cpp \
  CommandAction/VerboseAction.cpp \
  CommandAction/VersionAction.cpp \
  CommandAction/WarrantyAction.cpp
CMDACTIONHEADER = \
  CommandAction/BondLengthTableAction.hpp \
  CommandAction/ElementDbAction.hpp \
  CommandAction/FastParsingAction.hpp \
  CommandAction/HelpAction.hpp \
  CommandAction/VerboseAction.hpp \
  CommandAction/VersionAction.hpp \
  CommandAction/WarrantyAction.hpp

FRAGMENTATIONACTIONSOURCE = \
  FragmentationAction/ConstructBondGraphAction.cpp \
  FragmentationAction/DepthFirstSearchAction.cpp \
  FragmentationAction/FragmentationAction.cpp \
  FragmentationAction/SubgraphDissectionAction.cpp               
FRAGMENTATIONACTIONHEADER = \
  FragmentationAction/ConstructBondGraphAction.hpp \
  FragmentationAction/DepthFirstSearchAction.hpp \
  FragmentationAction/FragmentationAction.hpp \
  FragmentationAction/SubgraphDissectionAction.hpp

MOLECULEACTIONSOURCE = \
  MoleculeAction/BondFileAction.cpp \
  MoleculeAction/ChangeNameAction.cpp \
  MoleculeAction/CopyAction.cpp \
  MoleculeAction/FillWithMoleculeAction.cpp \
  MoleculeAction/FillVoidWithMoleculeAction.cpp \
  MoleculeAction/LinearInterpolationofTrajectoriesAction.cpp \
  MoleculeAction/RotateAroundSelfByAngleAction.cpp \
  MoleculeAction/RotateToPrincipalAxisSystemAction.cpp \
  MoleculeAction/SaveAdjacencyAction.cpp \
  MoleculeAction/SaveBondsAction.cpp \
  MoleculeAction/SaveTemperatureAction.cpp \
  MoleculeAction/SuspendInWaterAction.cpp \
  MoleculeAction/VerletIntegrationAction.cpp
MOLECULEACTIONHEADER = \
  MoleculeAction/BondFileAction.hpp \
  MoleculeAction/ChangeNameAction.hpp \
  MoleculeAction/CopyAction.hpp \
  MoleculeAction/FillWithMoleculeAction.hpp \
  MoleculeAction/FillVoidWithMoleculeAction.hpp \
  MoleculeAction/LinearInterpolationofTrajectoriesAction.hpp \
  MoleculeAction/RotateAroundSelfByAngleAction.hpp \
  MoleculeAction/RotateToPrincipalAxisSystemAction.hpp \
  MoleculeAction/SaveAdjacencyAction.hpp \
  MoleculeAction/SaveBondsAction.hpp \
  MoleculeAction/SaveTemperatureAction.hpp \
  MoleculeAction/SuspendInWaterAction.hpp \
  MoleculeAction/VerletIntegrationAction.hpp
                 
PARSERACTIONSOURCE = \
  ParserAction/LoadXyzAction.cpp \
  ParserAction/SaveXyzAction.cpp       
PARSERACTIONHEADER = \
  ParserAction/LoadXyzAction.hpp \
  ParserAction/SaveXyzAction.hpp

SELECTIONACTIONSOURCE = \
	SelectionAction/AllAtomsAction.cpp \
	SelectionAction/AllAtomsInsideCuboidAction.cpp \
	SelectionAction/AllAtomsInsideSphereAction.cpp \
	SelectionAction/AllAtomsOfMoleculeAction.cpp \
	SelectionAction/AllMoleculesAction.cpp \
	SelectionAction/AtomByElementAction.cpp \
	SelectionAction/AtomByIdAction.cpp \
	SelectionAction/ClearAllAtomsAction.cpp \
	SelectionAction/ClearAllMoleculesAction.cpp \
	SelectionAction/MoleculeByFormulaAction.cpp \
	SelectionAction/MoleculeByIdAction.cpp \
	SelectionAction/MoleculeOfAtomAction.cpp \
	SelectionAction/NotAllAtomsAction.cpp \
	SelectionAction/NotAllAtomsInsideCuboidAction.cpp \
	SelectionAction/NotAllAtomsInsideSphereAction.cpp \
	SelectionAction/NotAllAtomsOfMoleculeAction.cpp \
	SelectionAction/NotAllMoleculesAction.cpp \
	SelectionAction/NotAtomByElementAction.cpp \
	SelectionAction/NotAtomByIdAction.cpp \
	SelectionAction/NotMoleculeByFormulaAction.cpp \
	SelectionAction/NotMoleculeByIdAction.cpp \
	SelectionAction/NotMoleculeOfAtomAction.cpp
SELECTIONACTIONHEADER = \
	SelectionAction/AllAtomsAction.hpp \
	SelectionAction/AllAtomsInsideCuboidAction.hpp \
	SelectionAction/AllAtomsInsideSphereAction.hpp \
	SelectionAction/AllAtomsOfMoleculeAction.hpp \
	SelectionAction/AllMoleculesAction.hpp \
	SelectionAction/AtomByElementAction.hpp \
	SelectionAction/AtomByIdAction.hpp \
	SelectionAction/ClearAllAtomsAction.hpp \
	SelectionAction/ClearAllMoleculesAction.hpp \
	SelectionAction/MoleculeByFormulaAction.hpp \
	SelectionAction/MoleculeByIdAction.hpp \
	SelectionAction/MoleculeOfAtomAction.hpp \
	SelectionAction/NotAllAtomsAction.hpp \
	SelectionAction/NotAllAtomsInsideCuboidAction.hpp \
	SelectionAction/NotAllAtomsInsideSphereAction.hpp \
	SelectionAction/NotAllAtomsOfMoleculeAction.hpp \
	SelectionAction/NotAllMoleculesAction.hpp \
	SelectionAction/NotAtomByElementAction.hpp \
	SelectionAction/NotAtomByIdAction.hpp \
	SelectionAction/NotMoleculeByFormulaAction.hpp \
	SelectionAction/NotMoleculeByIdAction.hpp \
	SelectionAction/NotMoleculeOfAtomAction.cpp

TESSELATIONACTIONSOURCE = \
  TesselationAction/ConvexEnvelopeAction.cpp \
  TesselationAction/NonConvexEnvelopeAction.cpp               
TESSELATIONACTIONHEADER = \
  TesselationAction/ConvexEnvelopeAction.hpp \
  TesselationAction/NonConvexEnvelopeAction.hpp

WORLDACTIONSOURCE = \
  WorldAction/AddEmptyBoundaryAction.cpp \
  WorldAction/BoundInBoxAction.cpp \
  WorldAction/CenterInBoxAction.cpp \
  WorldAction/CenterOnEdgeAction.cpp \
  WorldAction/ChangeBoxAction.cpp \
  WorldAction/InputAction.cpp \
  WorldAction/OutputAction.cpp \
  WorldAction/RepeatBoxAction.cpp \
  WorldAction/ScaleBoxAction.cpp \
  WorldAction/SetDefaultNameAction.cpp \
  WorldAction/SetGaussianBasisAction.cpp \
  WorldAction/SetOutputFormatsAction.cpp
WORLDACTIONHEADER = \
  WorldAction/AddEmptyBoundaryAction.hpp \
  WorldAction/BoundInBoxAction.hpp \
  WorldAction/CenterInBoxAction.hpp \
  WorldAction/CenterOnEdgeAction.hpp \
  WorldAction/ChangeBoxAction.hpp \
  WorldAction/InputAction.hpp \
  WorldAction/OutputAction.hpp \
  WorldAction/RepeatBoxAction.hpp \
  WorldAction/ScaleBoxAction.hpp \
  WorldAction/SetDefaultNameAction.hpp \
  WorldAction/SetGaussianBasisAction.hpp \
  WorldAction/SetOutputFormatsAction.hpp               


lib_LTLIBRARIES = libMolecuilderActions-@MOLECUILDER_API_VERSION@.la
libMolecuilderActions_includedir = $(includedir)/molecuilder-$(MOLECUILDER_API_VERSION)/Actions/
libMolecuilderActions_libs = \
	../Parser/libMolecuilderParser-@MOLECUILDER_API_VERSION@.la \
	../UIElements/libMolecuilderUI-@MOLECUILDER_API_VERSION@.la
nobase_libMolecuilderActions_include_HEADERS = ${ACTIONSHEADER}

## Define the source file list for the "libexample-@MOLECUILDER_API_VERSION@.la"
## target.  Note that @MOLECUILDER_API_VERSION@ is not interpreted by Automake and
## will therefore be treated as if it were literally part of the target name,
## and the variable name derived from that.
## The file extension .cc is recognized by Automake, and makes it produce
## rules which invoke the C++ compiler to produce a libtool object file (.lo)
## from each source file.  Note that it is not necessary to list header files
## which are already listed elsewhere in a _HEADERS variable assignment.
libMolecuilderActions_@MOLECUILDER_API_VERSION@_la_SOURCES = ${ACTIONSSOURCE}

## Instruct libtool to include ABI version information in the generated shared
## library file (.so).  The library ABI version is defined in configure.ac, so
## that all version information is kept in one place.
libMolecuilderActions_@MOLECUILDER_API_VERSION@_la_LDFLAGS = -version-info $(MOLECUILDER_SO_VERSION)

## The generated configuration header is installed in its own subdirectory of
## $(libdir).  The reason for this is that the configuration information put
## into this header file describes the target platform the installed library
## has been built for.  Thus the file must not be installed into a location
## intended for architecture-independent files, as defined by the Filesystem
## Hierarchy Standard (FHS).
## The nodist_ prefix instructs Automake to not generate rules for including
## the listed files in the distribution on 'make dist'.  Files that are listed
## in _HEADERS variables are normally included in the distribution, but the
## configuration header file is generated at configure time and should not be
## shipped with the source tarball.
libMolecuilderActions_libincludedir = $(libdir)/molecuilder-$(MOLECUILDER_API_VERSION)/include
nodist_libMolecuilderActions_libinclude_HEADERS = $(top_builddir)/libmolecuilder_config.h

## Install the generated pkg-config file (.pc) into the expected location for
## architecture-dependent package configuration information.  Occasionally,
## pkg-config files are also used for architecture-independent data packages,
## in which case the correct install location would be $(datadir)/pkgconfig.
pkgconfigdir = $(libdir)/pkgconfig
pkgconfig_DATA = $(top_builddir)/molecuilder-$(MOLECUILDER_API_VERSION).pc

unity.cpp:
	echo "" >  unity.cpp; \
	list='$(ACTIONSSOURCE)'; for file in $$list; do \
	  echo "#include \"$(srcdir)/$$file\"" >> unity.cpp; \
	done;
	
MOSTLYCLEANFILES = unity.cpp