Changes in src/Actions/MoleculeAction/BondFileAction.cpp [be21fa:f10b0c]

File:

• src/Actions/MoleculeAction/BondFileAction.cpp (modified) (1 diff)

src/Actions/MoleculeAction/BondFileAction.cpp

@@ -43 +43 @@
   if(World::getInstance().countSelectedMolecules() == 1) {
     mol = World::getInstance().beginMoleculeSelection()->second;
-    LOG(0, "STATUS: Parsing bonds from " << params.bondfile
-        << ", skipping " << params.skiplines << "lines"
-        << ", adding " << params.id_offset << " to each id.");
-    ifstream input(params.bondfile.string().c_str());
+    LOG(0, "STATUS: Parsing bonds from " << params.bondfile.get()
+        << ", skipping " << params.skiplines.get() << "lines"
+        << ", adding " << params.id_offset.get() << " to each id.");
+    ifstream input(params.bondfile.get().string().c_str());
     World::AtomComposite Set = mol->getAtomSet();
-    World::getInstance().getBondGraph()->CreateAdjacencyListFromDbondFile(Set, &input, params.skiplines, params.id_offset);
+    World::getInstance().getBondGraph()->CreateAdjacencyListFromDbondFile(Set, &input, params.skiplines.get(), params.id_offset.get());
     input.close();
     mol->getBondCount();