Ignore:
Timestamp:
Oct 13, 2011, 1:03:40 PM (14 years ago)
Author:
Frederik Heber <heber@…>
Branches:
Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
Children:
61ff05, db67ea
Parents:
e0f8c8
git-author:
Frederik Heber <heber@…> (09/09/11 18:42:38)
git-committer:
Frederik Heber <heber@…> (10/13/11 13:03:40)
Message:

HUGE: All Action-related codes resides now in namespace MoleCuilder.

  • removed all namespace std in Actions..., replaced by MoleCuilder.
Location:
src/Actions/MoleculeAction
Files:
16 edited

Legend:

Unmodified
Added
Removed
  • src/Actions/MoleculeAction/BondFileAction.cpp

    re0f8c8 rce7fdc  
    3030#include <string>
    3131
    32 using namespace std;
     32#include "Actions/MoleculeAction/BondFileAction.hpp"
    3333
    34 #include "Actions/MoleculeAction/BondFileAction.hpp"
     34using namespace MoleCuilder;
    3535
    3636// and construct the stuff
  • src/Actions/MoleculeAction/ChangeNameAction.cpp

    re0f8c8 rce7fdc  
    2626#include <string>
    2727
    28 using namespace std;
     28#include "Actions/MoleculeAction/ChangeNameAction.hpp"
    2929
    30 #include "Actions/MoleculeAction/ChangeNameAction.hpp"
     30using namespace MoleCuilder;
    3131
    3232// and construct the stuff
  • src/Actions/MoleculeAction/CopyAction.cpp

    re0f8c8 rce7fdc  
    3232#include <string>
    3333
    34 using namespace std;
     34#include "Actions/MoleculeAction/CopyAction.hpp"
    3535
    36 #include "Actions/MoleculeAction/CopyAction.hpp"
     36using namespace MoleCuilder;
    3737
    3838// and construct the stuff
  • src/Actions/MoleculeAction/CreateMicelleAction.cpp

    re0f8c8 rce7fdc  
    5555#include "Actions/ValueStorage.hpp"
    5656
     57using namespace MoleCuilder;
    5758
    5859/** =========== define the function ====================== */
  • src/Actions/MoleculeAction/FillVoidWithMoleculeAction.cpp

    re0f8c8 rce7fdc  
    3636#include <string>
    3737
    38 using namespace std;
     38#include "Actions/MoleculeAction/FillVoidWithMoleculeAction.hpp"
    3939
    40 #include "Actions/MoleculeAction/FillVoidWithMoleculeAction.hpp"
     40using namespace MoleCuilder;
    4141
    4242// and construct the stuff
  • src/Actions/MoleculeAction/FillWithMoleculeAction.cpp

    re0f8c8 rce7fdc  
    3131#include "World.hpp"
    3232
    33 
    3433#include <iostream>
    3534#include <string>
    3635
    37 using namespace std;
     36#include "Actions/MoleculeAction/FillWithMoleculeAction.hpp"
    3837
    39 #include "Actions/MoleculeAction/FillWithMoleculeAction.hpp"
     38using namespace MoleCuilder;
    4039
    4140// and construct the stuff
  • src/Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.cpp

    re0f8c8 rce7fdc  
    3434#include <string>
    3535
    36 using namespace std;
     36#include "Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.hpp"
    3737
    38 #include "Actions/MoleculeAction/LinearInterpolationofTrajectoriesAction.hpp"
     38using namespace MoleCuilder;
    3939
    4040// and construct the stuff
  • src/Actions/MoleculeAction/LoadAction.cpp

    re0f8c8 rce7fdc  
    3232#include <boost/filesystem/fstream.hpp>
    3333
    34 using namespace std;
     34#include "LoadAction.hpp"
    3535
    36 #include "LoadAction.hpp"
     36using namespace MoleCuilder;
    3737
    3838// and construct the stuff
  • src/Actions/MoleculeAction/RotateAroundSelfByAngleAction.cpp

    re0f8c8 rce7fdc  
    2727#include "molecule.hpp"
    2828
    29 
    3029#include <iostream>
    3130#include <fstream>
    3231#include <string>
    3332
    34 using namespace std;
     33#include "Actions/MoleculeAction/RotateAroundSelfByAngleAction.hpp"
    3534
    36 #include "Actions/MoleculeAction/RotateAroundSelfByAngleAction.hpp"
     35using namespace MoleCuilder;
    3736
    3837// and construct the stuff
  • src/Actions/MoleculeAction/RotateToPrincipalAxisSystemAction.cpp

    re0f8c8 rce7fdc  
    2828#include "molecule.hpp"
    2929
    30 
    3130#include <iostream>
    3231#include <fstream>
    3332#include <string>
    3433
    35 using namespace std;
     34#include "Actions/MoleculeAction/RotateToPrincipalAxisSystemAction.hpp"
    3635
    37 #include "Actions/MoleculeAction/RotateToPrincipalAxisSystemAction.hpp"
     36using namespace MoleCuilder;
    3837
    3938// and construct the stuff
  • src/Actions/MoleculeAction/SaveAdjacencyAction.cpp

    re0f8c8 rce7fdc  
    2727#include "World.hpp"
    2828
    29 
    3029#include <iostream>
    3130#include <fstream>
    3231#include <string>
    3332
    34 using namespace std;
     33#include "Actions/MoleculeAction/SaveAdjacencyAction.hpp"
    3534
    36 #include "Actions/MoleculeAction/SaveAdjacencyAction.hpp"
     35using namespace MoleCuilder;
    3736
    3837// and construct the stuff
  • src/Actions/MoleculeAction/SaveBondsAction.cpp

    re0f8c8 rce7fdc  
    2727#include "World.hpp"
    2828
    29 
    3029#include <iostream>
    3130#include <fstream>
    3231#include <string>
    3332
    34 using namespace std;
     33#include "Actions/MoleculeAction/SaveBondsAction.hpp"
    3534
    36 #include "Actions/MoleculeAction/SaveBondsAction.hpp"
     35using namespace MoleCuilder;
    3736
    3837// and construct the stuff
  • src/Actions/MoleculeAction/SaveSelectedMoleculesAction.cpp

    re0f8c8 rce7fdc  
    2929#include <boost/filesystem/fstream.hpp>
    3030
    31 using namespace std;
     31#include "SaveSelectedMoleculesAction.hpp"
    3232
    33 #include "SaveSelectedMoleculesAction.hpp"
     33using namespace MoleCuilder;
    3434
    3535// and construct the stuff
  • src/Actions/MoleculeAction/SaveTemperatureAction.cpp

    re0f8c8 rce7fdc  
    3333#include <vector>
    3434
    35 using namespace std;
     35#include "Actions/MoleculeAction/SaveTemperatureAction.hpp"
    3636
    37 #include "Actions/MoleculeAction/SaveTemperatureAction.hpp"
     37using namespace MoleCuilder;
    3838
    3939// and construct the stuff
  • src/Actions/MoleculeAction/SuspendInWaterAction.cpp

    re0f8c8 rce7fdc  
    2929#include <string>
    3030
    31 using namespace std;
     31#include "Actions/MoleculeAction/SuspendInWaterAction.hpp"
    3232
    33 #include "Actions/MoleculeAction/SuspendInWaterAction.hpp"
     33using namespace MoleCuilder;
    3434
    3535// and construct the stuff
  • src/Actions/MoleculeAction/VerletIntegrationAction.cpp

    re0f8c8 rce7fdc  
    3333#include <string>
    3434
    35 using namespace std;
     35#include "Actions/MoleculeAction/VerletIntegrationAction.hpp"
    3636
    37 #include "Actions/MoleculeAction/VerletIntegrationAction.hpp"
     37using namespace MoleCuilder;
    3838
    3939// and construct the stuff
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