Changeset ce5ac3 for src/vector.cpp
- Timestamp:
- Jul 23, 2009, 12:32:48 PM (16 years ago)
- Branches:
- Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, Candidate_v1.7.0, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
- Children:
- d067d45
- Parents:
- 986c80
- File:
-
- 1 edited
-
src/vector.cpp (modified) (6 diffs)
Legend:
- Unmodified
- Added
- Removed
-
src/vector.cpp
r986c80 rce5ac3 327 327 } 328 328 ost << ")"; 329 return ost;329 return ost; 330 330 }; 331 331 … … 517 517 bool Vector::MakeNormalVector(const Vector *y1) 518 518 { 519 bool result = false;519 bool result = false; 520 520 Vector x1; 521 521 x1.CopyVector(y1); … … 523 523 SubtractVector(&x1); 524 524 for (int i=NDIM;i--;) 525 result = result || (fabs(x[i]) > MYEPSILON);525 result = result || (fabs(x[i]) > MYEPSILON); 526 526 527 527 return result; … … 597 597 bool Vector::LSQdistance(Vector **vectors, int num) 598 598 { 599 int j;600 601 for (j=0;j<num;j++) {602 cout << Verbose(1) << j << "th atom's vector: ";603 (vectors[j])->Output((ofstream *)&cout);604 cout << endl;605 }599 int j; 600 601 for (j=0;j<num;j++) { 602 cout << Verbose(1) << j << "th atom's vector: "; 603 (vectors[j])->Output((ofstream *)&cout); 604 cout << endl; 605 } 606 606 607 607 int np = 3; 608 struct LSQ_params par;608 struct LSQ_params par; 609 609 610 610 const gsl_multimin_fminimizer_type *T = … … 627 627 /* Starting point */ 628 628 par.vectors = vectors; 629 par.num = num;630 631 for (i=NDIM;i--;)632 gsl_vector_set(y, i, (vectors[0]->x[i] - vectors[1]->x[i])/2.);629 par.num = num; 630 631 for (i=NDIM;i--;) 632 gsl_vector_set(y, i, (vectors[0]->x[i] - vectors[1]->x[i])/2.); 633 633 634 634 /* Initialize method and iterate */ … … 671 671 gsl_multimin_fminimizer_free (s); 672 672 673 return true;673 return true; 674 674 }; 675 675
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