Changeset 70d9b9 for src/Actions/FragmentationAction
- Timestamp:
- Jul 22, 2010, 8:15:02 PM (15 years ago)
- Branches:
- Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
- Children:
- 1015fd
- Parents:
- f394a6
- Location:
- src/Actions/FragmentationAction
- Files:
-
- 2 edited
Legend:
- Unmodified
- Added
- Removed
-
src/Actions/FragmentationAction/FragmentationAction.cpp
rf394a6 r70d9b9 25 25 #include "UIElements/UIFactory.hpp" 26 26 #include "UIElements/Dialog.hpp" 27 #include " Actions/MapOfActions.hpp"27 #include "UIElements/ValueStorage.hpp" 28 28 29 29 const char FragmentationFragmentationAction::NAME[] = "fragment-mol"; … … 36 36 {} 37 37 38 Dialog* FragmentationFragmentationAction::createDialog() { 39 Dialog *dialog = UIFactory::getInstance().makeDialog(); 40 41 dialog->queryString(NAME, ValueStorage::getInstance().getDescription(NAME)); 42 dialog->queryDouble("distance", ValueStorage::getInstance().getDescription("distance")); 43 dialog->queryInt("order", ValueStorage::getInstance().getDescription("order")); 44 45 return dialog; 46 } 47 38 48 Action::state_ptr FragmentationFragmentationAction::performCall() { 39 Dialog *dialog = UIFactory::getInstance().makeDialog();40 49 clock_t start,end; 41 50 molecule *mol = NULL; … … 46 55 int ExitFlag = 0; 47 56 48 cout << "pre-dialog"<< endl; 49 dialog->queryString(NAME, &path, MapOfActions::getInstance().getDescription(NAME)); 50 dialog->queryMolecule("molecule-by-id", &mol, MapOfActions::getInstance().getDescription("molecule-by-id")); 51 dialog->queryDouble("distance", &distance, MapOfActions::getInstance().getDescription("distance")); 52 dialog->queryInt("order", &order, MapOfActions::getInstance().getDescription("order")); 57 ValueStorage::getInstance().queryCurrentValue(NAME, path); 58 ValueStorage::getInstance().queryCurrentValue("distance", distance); 59 ValueStorage::getInstance().queryCurrentValue("order", order); 53 60 54 if(dialog->display()) {55 cout << "POST-dialog"<< endl;61 for (World::MoleculeSelectionIterator iter = World::getInstance().beginMoleculeSelection(); iter != World::getInstance().endMoleculeSelection(); ++iter) { 62 mol = iter->second; 56 63 ASSERT(mol != NULL, "No molecule has been picked for fragmentation."); 57 64 DoLog(0) && (Log() << Verbose(0) << "Fragmenting molecule with bond distance " << distance << " angstroem, order of " << order << "." << endl); … … 66 73 end = clock(); 67 74 DoLog(0) && (Log() << Verbose(0) << "Clocks for this operation: " << (end-start) << ", time: " << ((double)(end-start)/CLOCKS_PER_SEC) << "s." << endl); 68 delete dialog;69 return Action::success;70 } else {71 delete dialog;72 return Action::failure;73 75 } 76 return Action::success; 74 77 } 75 78 76 79 Action::state_ptr FragmentationFragmentationAction::performUndo(Action::state_ptr _state) { 77 // ParserLoadXyzState *state = assert_cast<ParserLoadXyzState*>(_state.get()); 78 79 return Action::failure; 80 // string newName = state->mol->getName(); 81 // state->mol->setName(state->lastName); 82 // 83 // return Action::state_ptr(new ParserLoadXyzState(state->mol,newName)); 80 return Action::success; 84 81 } 85 82 86 83 Action::state_ptr FragmentationFragmentationAction::performRedo(Action::state_ptr _state){ 87 return Action:: failure;84 return Action::success; 88 85 } 89 86 90 87 bool FragmentationFragmentationAction::canUndo() { 91 return false;88 return true; 92 89 } 93 90 94 91 bool FragmentationFragmentationAction::shouldUndo() { 95 return false;92 return true; 96 93 } 97 94 -
src/Actions/FragmentationAction/FragmentationAction.hpp
rf394a6 r70d9b9 21 21 virtual const std::string getName(); 22 22 private: 23 virtual Dialog * createDialog(); 23 24 virtual Action::state_ptr performCall(); 24 25 virtual Action::state_ptr performUndo(Action::state_ptr);
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