Changeset 69682a for src

Timestamp:

Mar 8, 2017, 9:46:36 PM (8 years ago)

Author:

Frederik Heber <heber@…>

Branches:

Action_Thermostats, Add_AtomRandomPerturbation, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_StructOpt_integration_tests, AutomationFragmentation_failures, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_ChronosMutex, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, GeometryObjects, Gui_displays_atomic_force_velocity, IndependentFragmentGrids_IntegrationTest, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, PartialCharges_OrthogonalSummation, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, RotateToPrincipalAxisSystem_UndoRedo, StoppableMakroAction, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, Ubuntu_1604_changes, stable

Children:

ba1152

Parents:

494d1f

git-author:

Frederik Heber <heber@…> (03/06/17 13:50:46)

git-committer:

Frederik Heber <heber@…> (03/08/17 21:46:36)

Message:

LinearAlgebra's static Vectors are now ignore Memory::ignore()'d there.

• this is necessary as although zeroVec and unitVec are static, the contained VectorContent is not (but heap-allocated) and hence fails the MemDebug check. We fixed this so far inside molecuilder via cleanUp(), however this fails now with molecuilder_mpqc. Now we use static functions that internally contain a unique VectorContent* that is Memory::ignore()'d.

File:

• src/cleanUp.cpp (modified) (1 diff)

src/cleanUp.cpp

@@ -84 +84 @@
 void AddStaticEntitiestoIgnoreList()
 {
-  // zeroVec and unitVec are global variables (on the stack) but vectorContent
-  // within is situated on the heap and has to be ignored
-  Memory::ignore(zeroVec.get());
-  Memory::ignore(unitVec[0].get());
-  Memory::ignore(unitVec[1].get());
-  Memory::ignore(unitVec[2].get());
-
   // XmlParser has static instance that uses vectorContent as well
   Memory::ignore(FormatParser< xml >::defaultAtomInfo.field.get());