- Timestamp:
- Jun 19, 2017, 8:24:16 AM (8 years ago)
- Branches:
- Action_Thermostats, Add_AtomRandomPerturbation, Add_SelectAtomByNameAction, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_StructOpt_integration_tests, AutomationFragmentation_failures, Candidate_v1.6.1, ChangeBugEmailaddress, ChemicalSpaceEvaluator, EmpiricalPotential_contain_HomologyGraph_documentation, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, Fix_Verbose_Codepatterns, ForceAnnealing_oldresults, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, GeometryObjects, Gui_displays_atomic_force_velocity, IndependentFragmentGrids_IntegrationTest, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, StoppableMakroAction, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps
- Children:
- 97c364
- Parents:
- d8c6c7
- git-author:
- Frederik Heber <heber@…> (03/25/17 13:59:40)
- git-committer:
- Frederik Heber <frederik.heber@…> (06/19/17 08:24:16)
- File:
-
- 1 edited
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- Added
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doc/userguide/userguide.xml
rd8c6c7 r48eab8 1 <?xml version='1.0' encoding='UTF-8'?>1 <?xml version='1.0' encoding='UTF-8'?> 2 2 <!-- This document was created with Syntext Serna Free. --><!DOCTYPE book PUBLIC "-//OASIS//DTD DocBook XML V4.5//EN" "http://www.oasis-open.org/docbook/xml/4.5/docbookx.dtd" [ 3 3 <!ENTITY molecuilder_logo SYSTEM "pictures/molecuilder_logo.png" NDATA PNG> … … 2374 2374 <para>Underneath the time line there is another place for 2375 2375 tabs.</para> 2376 <itemizedlist> 2377 <listitem>Molecules</listitem> 2378 <listitem>All Elements</listitem> 2379 <listitem>All Fragments</listitem> 2380 <listitem>All Homologies</listitem> 2381 <listitem>All Geometries</listitem> 2382 <listitem>Logs</listitem> 2383 <listitem>Errors</listitem> 2384 </itemizedlist> 2376 2385 <para>The first is on molecules, listing all present molecules of 2377 2386 the molecular system in a tree view. If you click on a specific … … 2383 2392 system. Clicking on a present element will select all atoms of this 2384 2393 specific element. A subsequent click unselects again.</para> 2385 <para>Subsequently follow t abs on enumerating the fragments and their2394 <para>Subsequently follow two tabs on enumerating the fragments and their 2386 2395 fragment energies if calculated and the homologies along with 2387 2396 graphical depiction (via QWT), again if present.</para> 2397 <para>After that, we have a tab listing all geometry objects. These 2398 are vectors you may store via one of the Actions. If you hover over 2399 a vector, its length is shown. If you have selected one vector and 2400 hover over another one, then the angle between the two is shown. 2401 </para> 2402 <para>Finally, there are two tabs showing log messages of actions 2403 in the first tab and general information on what is currently done. Errors and 2404 warnings are listed in the second tab.</para> 2388 2405 </section> 2389 2406 </section>
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