Changeset 48d3c0 for src


Ignore:
Timestamp:
Nov 8, 2011, 11:45:15 AM (13 years ago)
Author:
Frederik Heber <heber@…>
Branches:
Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
Children:
dd0f1b
Parents:
4269ca
git-author:
Frederik Heber <heber@…> (11/08/11 08:09:35)
git-committer:
Frederik Heber <heber@…> (11/08/11 11:45:15)
Message:

DISTCHECKFIX: Added some missing header files in src/Actions.

  • some of the new python files were not in ...HEADERS.
Location:
src
Files:
2 edited

Legend:

Unmodified
Added
Removed
  • src/Actions/Makefile.am

    r4269ca r48d3c0  
    1212  Actions/ManipulateAtomsProcess.cpp \
    1313  Actions/MethodAction.cpp \
    14         Actions/OptionRegistry.cpp \
    15         Actions/OptionTrait.cpp \
     14  Actions/OptionRegistry.cpp \
     15  Actions/OptionTrait.cpp \
    1616  Actions/Process.cpp \
    1717  Actions/Values.cpp \
     
    2323  Actions/Action_impl_header.hpp \
    2424  Actions/Action_impl_pre.hpp \
     25  Actions/Action_impl_undef.hpp \
    2526  Actions/ActionHistory.hpp \
    2627  Actions/ActionRegistry.hpp \
     
    3334  Actions/Calculation_impl.hpp \
    3435  Actions/ErrorAction.hpp \
     36  Actions/GlobalListOfActions.hpp \
    3537  Actions/MakroAction.hpp \
    3638  Actions/ManipulateAtomsProcess.hpp \
    3739  Actions/MethodAction.hpp \
    38         Actions/OptionRegistry.hpp \
    39         Actions/OptionTrait.hpp \
     40  Actions/OptionRegistry.hpp \
     41  Actions/OptionTrait.hpp \
    4042  Actions/Process.hpp \
    4143  Actions/Reaction.hpp \
     
    4446  Actions/Reaction_impl_pre.hpp \
    4547  Actions/Values.hpp \
    46         Actions/ValueStorage.hpp
     48  Actions/ValueStorage.hpp
    4749 
    4850ACTIONPROTOTYPESSOURCE = \
     
    261263
    262264RANDONNUMBERSSOURCE =\
    263         Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.cpp \
    264         Actions/RandomNumbersAction/SetRandomNumbersEngineAction.cpp
     265  Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.cpp \
     266  Actions/RandomNumbersAction/SetRandomNumbersEngineAction.cpp
    265267RANDONNUMBERSHEADER =\
    266         Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.hpp \
    267         Actions/RandomNumbersAction/SetRandomNumbersEngineAction.hpp
     268  Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.hpp \
     269  Actions/RandomNumbersAction/SetRandomNumbersEngineAction.hpp
    268270RANDONNUMBERSDEFS =\
    269         Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.def \
    270         Actions/RandomNumbersAction/SetRandomNumbersEngineAction.def
     271  Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.def \
     272  Actions/RandomNumbersAction/SetRandomNumbersEngineAction.def
    271273                 
    272274SELECTIONATOMACTIONSOURCE = \
    273         Actions/SelectionAction/Atoms/AllAtomsAction.cpp \
    274         Actions/SelectionAction/Atoms/AllAtomsInsideCuboidAction.cpp \
    275         Actions/SelectionAction/Atoms/AllAtomsInsideSphereAction.cpp \
    276         Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.cpp \
    277         Actions/SelectionAction/Atoms/AtomByElementAction.cpp \
    278         Actions/SelectionAction/Atoms/AtomByIdAction.cpp \
    279         Actions/SelectionAction/Atoms/ClearAllAtomsAction.cpp \
    280         Actions/SelectionAction/Atoms/NotAllAtomsAction.cpp \
    281         Actions/SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.cpp \
    282         Actions/SelectionAction/Atoms/NotAllAtomsInsideSphereAction.cpp \
    283         Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.cpp \
    284         Actions/SelectionAction/Atoms/NotAtomByElementAction.cpp \
    285         Actions/SelectionAction/Atoms/NotAtomByIdAction.cpp
     275  Actions/SelectionAction/Atoms/AllAtomsAction.cpp \
     276  Actions/SelectionAction/Atoms/AllAtomsInsideCuboidAction.cpp \
     277  Actions/SelectionAction/Atoms/AllAtomsInsideSphereAction.cpp \
     278  Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.cpp \
     279  Actions/SelectionAction/Atoms/AtomByElementAction.cpp \
     280  Actions/SelectionAction/Atoms/AtomByIdAction.cpp \
     281  Actions/SelectionAction/Atoms/ClearAllAtomsAction.cpp \
     282  Actions/SelectionAction/Atoms/NotAllAtomsAction.cpp \
     283  Actions/SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.cpp \
     284  Actions/SelectionAction/Atoms/NotAllAtomsInsideSphereAction.cpp \
     285  Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.cpp \
     286  Actions/SelectionAction/Atoms/NotAtomByElementAction.cpp \
     287  Actions/SelectionAction/Atoms/NotAtomByIdAction.cpp
    286288SELECTIONATOMACTIONHEADER = \
    287         Actions/SelectionAction/Atoms/AllAtomsAction.hpp \
    288         Actions/SelectionAction/Atoms/AllAtomsInsideCuboidAction.hpp \
    289         Actions/SelectionAction/Atoms/AllAtomsInsideSphereAction.hpp \
    290         Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.hpp \
    291         Actions/SelectionAction/Atoms/AtomByElementAction.hpp \
    292         Actions/SelectionAction/Atoms/AtomByIdAction.hpp \
    293         Actions/SelectionAction/Atoms/ClearAllAtomsAction.hpp \
    294         Actions/SelectionAction/Atoms/NotAllAtomsAction.hpp \
    295         Actions/SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.hpp \
    296         Actions/SelectionAction/Atoms/NotAllAtomsInsideSphereAction.hpp \
    297         Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.hpp \
    298         Actions/SelectionAction/Atoms/NotAtomByElementAction.hpp \
    299         Actions/SelectionAction/Atoms/NotAtomByIdAction.hpp
     289  Actions/SelectionAction/Atoms/AllAtomsAction.hpp \
     290  Actions/SelectionAction/Atoms/AllAtomsInsideCuboidAction.hpp \
     291  Actions/SelectionAction/Atoms/AllAtomsInsideSphereAction.hpp \
     292  Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.hpp \
     293  Actions/SelectionAction/Atoms/AtomByElementAction.hpp \
     294  Actions/SelectionAction/Atoms/AtomByIdAction.hpp \
     295  Actions/SelectionAction/Atoms/ClearAllAtomsAction.hpp \
     296  Actions/SelectionAction/Atoms/NotAllAtomsAction.hpp \
     297  Actions/SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.hpp \
     298  Actions/SelectionAction/Atoms/NotAllAtomsInsideSphereAction.hpp \
     299  Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.hpp \
     300  Actions/SelectionAction/Atoms/NotAtomByElementAction.hpp \
     301  Actions/SelectionAction/Atoms/NotAtomByIdAction.hpp
    300302SELECTIONATOMACTIONDEFS = \
    301         Actions/SelectionAction/Atoms/AllAtomsAction.def \
    302         Actions/SelectionAction/Atoms/AllAtomsInsideCuboidAction.def \
    303         Actions/SelectionAction/Atoms/AllAtomsInsideSphereAction.def \
    304         Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.def \
    305         Actions/SelectionAction/Atoms/AtomByElementAction.def \
    306         Actions/SelectionAction/Atoms/AtomByIdAction.def \
    307         Actions/SelectionAction/Atoms/ClearAllAtomsAction.def \
    308         Actions/SelectionAction/Atoms/NotAllAtomsAction.def \
    309         Actions/SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.def \
    310         Actions/SelectionAction/Atoms/NotAllAtomsInsideSphereAction.def \
    311         Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.def \
    312         Actions/SelectionAction/Atoms/NotAtomByElementAction.def \
    313         Actions/SelectionAction/Atoms/NotAtomByIdAction.def
     303  Actions/SelectionAction/Atoms/AllAtomsAction.def \
     304  Actions/SelectionAction/Atoms/AllAtomsInsideCuboidAction.def \
     305  Actions/SelectionAction/Atoms/AllAtomsInsideSphereAction.def \
     306  Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.def \
     307  Actions/SelectionAction/Atoms/AtomByElementAction.def \
     308  Actions/SelectionAction/Atoms/AtomByIdAction.def \
     309  Actions/SelectionAction/Atoms/ClearAllAtomsAction.def \
     310  Actions/SelectionAction/Atoms/NotAllAtomsAction.def \
     311  Actions/SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.def \
     312  Actions/SelectionAction/Atoms/NotAllAtomsInsideSphereAction.def \
     313  Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.def \
     314  Actions/SelectionAction/Atoms/NotAtomByElementAction.def \
     315  Actions/SelectionAction/Atoms/NotAtomByIdAction.def
    314316
    315317SELECTIONMOLECULEACTIONSOURCE = \
    316         Actions/SelectionAction/Molecules/AllMoleculesAction.cpp \
    317         Actions/SelectionAction/Molecules/ClearAllMoleculesAction.cpp \
    318         Actions/SelectionAction/Molecules/MoleculeByFormulaAction.cpp \
    319         Actions/SelectionAction/Molecules/MoleculeByIdAction.cpp \
    320         Actions/SelectionAction/Molecules/MoleculeByNameAction.cpp \
    321         Actions/SelectionAction/Molecules/MoleculeByOrderAction.cpp \
    322         Actions/SelectionAction/Molecules/MoleculeOfAtomAction.cpp \
    323         Actions/SelectionAction/Molecules/NotAllMoleculesAction.cpp \
    324         Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.cpp \
    325         Actions/SelectionAction/Molecules/NotMoleculeByIdAction.cpp \
    326         Actions/SelectionAction/Molecules/NotMoleculeByNameAction.cpp \
    327         Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.cpp \
    328         Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.cpp
     318  Actions/SelectionAction/Molecules/AllMoleculesAction.cpp \
     319  Actions/SelectionAction/Molecules/ClearAllMoleculesAction.cpp \
     320  Actions/SelectionAction/Molecules/MoleculeByFormulaAction.cpp \
     321  Actions/SelectionAction/Molecules/MoleculeByIdAction.cpp \
     322  Actions/SelectionAction/Molecules/MoleculeByNameAction.cpp \
     323  Actions/SelectionAction/Molecules/MoleculeByOrderAction.cpp \
     324  Actions/SelectionAction/Molecules/MoleculeOfAtomAction.cpp \
     325  Actions/SelectionAction/Molecules/NotAllMoleculesAction.cpp \
     326  Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.cpp \
     327  Actions/SelectionAction/Molecules/NotMoleculeByIdAction.cpp \
     328  Actions/SelectionAction/Molecules/NotMoleculeByNameAction.cpp \
     329  Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.cpp \
     330  Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.cpp
    329331SELECTIONMOLECULEACTIONHEADER = \
    330         Actions/SelectionAction/Molecules/AllMoleculesAction.hpp \
    331         Actions/SelectionAction/Molecules/ClearAllMoleculesAction.hpp \
    332         Actions/SelectionAction/Molecules/MoleculeByFormulaAction.hpp \
    333         Actions/SelectionAction/Molecules/MoleculeByIdAction.hpp \
    334         Actions/SelectionAction/Molecules/MoleculeByNameAction.hpp \
    335         Actions/SelectionAction/Molecules/MoleculeByOrderAction.hpp \
    336         Actions/SelectionAction/Molecules/MoleculeOfAtomAction.hpp \
    337         Actions/SelectionAction/Molecules/NotAllMoleculesAction.hpp \
    338         Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.hpp \
    339         Actions/SelectionAction/Molecules/NotMoleculeByIdAction.hpp \
    340         Actions/SelectionAction/Molecules/NotMoleculeByNameAction.hpp \
    341         Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.hpp \
    342         Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.hpp
     332  Actions/SelectionAction/Molecules/AllMoleculesAction.hpp \
     333  Actions/SelectionAction/Molecules/ClearAllMoleculesAction.hpp \
     334  Actions/SelectionAction/Molecules/MoleculeByFormulaAction.hpp \
     335  Actions/SelectionAction/Molecules/MoleculeByIdAction.hpp \
     336  Actions/SelectionAction/Molecules/MoleculeByNameAction.hpp \
     337  Actions/SelectionAction/Molecules/MoleculeByOrderAction.hpp \
     338  Actions/SelectionAction/Molecules/MoleculeOfAtomAction.hpp \
     339  Actions/SelectionAction/Molecules/NotAllMoleculesAction.hpp \
     340  Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.hpp \
     341  Actions/SelectionAction/Molecules/NotMoleculeByIdAction.hpp \
     342  Actions/SelectionAction/Molecules/NotMoleculeByNameAction.hpp \
     343  Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.hpp \
     344  Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.hpp
    343345SELECTIONMOLECULEACTIONDEFS = \
    344         Actions/SelectionAction/Molecules/AllMoleculesAction.def \
    345         Actions/SelectionAction/Molecules/ClearAllMoleculesAction.def \
    346         Actions/SelectionAction/Molecules/MoleculeByFormulaAction.def \
    347         Actions/SelectionAction/Molecules/MoleculeByIdAction.def \
    348         Actions/SelectionAction/Molecules/MoleculeByNameAction.def \
    349         Actions/SelectionAction/Molecules/MoleculeByOrderAction.def \
    350         Actions/SelectionAction/Molecules/MoleculeOfAtomAction.def \
    351         Actions/SelectionAction/Molecules/NotAllMoleculesAction.def \
    352         Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.def \
    353         Actions/SelectionAction/Molecules/NotMoleculeByIdAction.def \
    354         Actions/SelectionAction/Molecules/NotMoleculeByNameAction.def \
    355         Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.def \
    356         Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.def
     346  Actions/SelectionAction/Molecules/AllMoleculesAction.def \
     347  Actions/SelectionAction/Molecules/ClearAllMoleculesAction.def \
     348  Actions/SelectionAction/Molecules/MoleculeByFormulaAction.def \
     349  Actions/SelectionAction/Molecules/MoleculeByIdAction.def \
     350  Actions/SelectionAction/Molecules/MoleculeByNameAction.def \
     351  Actions/SelectionAction/Molecules/MoleculeByOrderAction.def \
     352  Actions/SelectionAction/Molecules/MoleculeOfAtomAction.def \
     353  Actions/SelectionAction/Molecules/NotAllMoleculesAction.def \
     354  Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.def \
     355  Actions/SelectionAction/Molecules/NotMoleculeByIdAction.def \
     356  Actions/SelectionAction/Molecules/NotMoleculeByNameAction.def \
     357  Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.def \
     358  Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.def
    357359       
    358360TESSELATIONACTIONSOURCE = \
  • src/Makefile.am

    r4269ca r48d3c0  
    274274        cleanUp.cpp \
    275275        cleanUp.hpp \
     276        Actions/Action_impl_python.hpp \
     277        Actions/GlobalListOfActions.hpp \
     278        Actions/ActionHistory.hpp \
    276279        Actions/pyMoleCuilder.cpp
    277280pyMoleCuilder_la_CPPFLAGS = ${BOOST_CPPFLAGS} ${CodePatterns_CFLAGS} -I$(PYTHON_INCLUDE_DIR)
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