- Timestamp:
- Nov 8, 2011, 11:45:15 AM (13 years ago)
- Branches:
- Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
- Children:
- dd0f1b
- Parents:
- 4269ca
- git-author:
- Frederik Heber <heber@…> (11/08/11 08:09:35)
- git-committer:
- Frederik Heber <heber@…> (11/08/11 11:45:15)
- Location:
- src
- Files:
-
- 2 edited
Legend:
- Unmodified
- Added
- Removed
-
src/Actions/Makefile.am
r4269ca r48d3c0 12 12 Actions/ManipulateAtomsProcess.cpp \ 13 13 Actions/MethodAction.cpp \ 14 15 14 Actions/OptionRegistry.cpp \ 15 Actions/OptionTrait.cpp \ 16 16 Actions/Process.cpp \ 17 17 Actions/Values.cpp \ … … 23 23 Actions/Action_impl_header.hpp \ 24 24 Actions/Action_impl_pre.hpp \ 25 Actions/Action_impl_undef.hpp \ 25 26 Actions/ActionHistory.hpp \ 26 27 Actions/ActionRegistry.hpp \ … … 33 34 Actions/Calculation_impl.hpp \ 34 35 Actions/ErrorAction.hpp \ 36 Actions/GlobalListOfActions.hpp \ 35 37 Actions/MakroAction.hpp \ 36 38 Actions/ManipulateAtomsProcess.hpp \ 37 39 Actions/MethodAction.hpp \ 38 39 40 Actions/OptionRegistry.hpp \ 41 Actions/OptionTrait.hpp \ 40 42 Actions/Process.hpp \ 41 43 Actions/Reaction.hpp \ … … 44 46 Actions/Reaction_impl_pre.hpp \ 45 47 Actions/Values.hpp \ 46 48 Actions/ValueStorage.hpp 47 49 48 50 ACTIONPROTOTYPESSOURCE = \ … … 261 263 262 264 RANDONNUMBERSSOURCE =\ 263 264 265 Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.cpp \ 266 Actions/RandomNumbersAction/SetRandomNumbersEngineAction.cpp 265 267 RANDONNUMBERSHEADER =\ 266 267 268 Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.hpp \ 269 Actions/RandomNumbersAction/SetRandomNumbersEngineAction.hpp 268 270 RANDONNUMBERSDEFS =\ 269 270 271 Actions/RandomNumbersAction/SetRandomNumbersDistributionAction.def \ 272 Actions/RandomNumbersAction/SetRandomNumbersEngineAction.def 271 273 272 274 SELECTIONATOMACTIONSOURCE = \ 273 274 275 276 277 278 279 280 281 282 283 284 285 275 Actions/SelectionAction/Atoms/AllAtomsAction.cpp \ 276 Actions/SelectionAction/Atoms/AllAtomsInsideCuboidAction.cpp \ 277 Actions/SelectionAction/Atoms/AllAtomsInsideSphereAction.cpp \ 278 Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.cpp \ 279 Actions/SelectionAction/Atoms/AtomByElementAction.cpp \ 280 Actions/SelectionAction/Atoms/AtomByIdAction.cpp \ 281 Actions/SelectionAction/Atoms/ClearAllAtomsAction.cpp \ 282 Actions/SelectionAction/Atoms/NotAllAtomsAction.cpp \ 283 Actions/SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.cpp \ 284 Actions/SelectionAction/Atoms/NotAllAtomsInsideSphereAction.cpp \ 285 Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.cpp \ 286 Actions/SelectionAction/Atoms/NotAtomByElementAction.cpp \ 287 Actions/SelectionAction/Atoms/NotAtomByIdAction.cpp 286 288 SELECTIONATOMACTIONHEADER = \ 287 288 289 290 291 292 293 294 295 296 297 298 299 289 Actions/SelectionAction/Atoms/AllAtomsAction.hpp \ 290 Actions/SelectionAction/Atoms/AllAtomsInsideCuboidAction.hpp \ 291 Actions/SelectionAction/Atoms/AllAtomsInsideSphereAction.hpp \ 292 Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.hpp \ 293 Actions/SelectionAction/Atoms/AtomByElementAction.hpp \ 294 Actions/SelectionAction/Atoms/AtomByIdAction.hpp \ 295 Actions/SelectionAction/Atoms/ClearAllAtomsAction.hpp \ 296 Actions/SelectionAction/Atoms/NotAllAtomsAction.hpp \ 297 Actions/SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.hpp \ 298 Actions/SelectionAction/Atoms/NotAllAtomsInsideSphereAction.hpp \ 299 Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.hpp \ 300 Actions/SelectionAction/Atoms/NotAtomByElementAction.hpp \ 301 Actions/SelectionAction/Atoms/NotAtomByIdAction.hpp 300 302 SELECTIONATOMACTIONDEFS = \ 301 302 303 304 305 306 307 308 309 310 311 312 313 303 Actions/SelectionAction/Atoms/AllAtomsAction.def \ 304 Actions/SelectionAction/Atoms/AllAtomsInsideCuboidAction.def \ 305 Actions/SelectionAction/Atoms/AllAtomsInsideSphereAction.def \ 306 Actions/SelectionAction/Atoms/AllAtomsOfMoleculeAction.def \ 307 Actions/SelectionAction/Atoms/AtomByElementAction.def \ 308 Actions/SelectionAction/Atoms/AtomByIdAction.def \ 309 Actions/SelectionAction/Atoms/ClearAllAtomsAction.def \ 310 Actions/SelectionAction/Atoms/NotAllAtomsAction.def \ 311 Actions/SelectionAction/Atoms/NotAllAtomsInsideCuboidAction.def \ 312 Actions/SelectionAction/Atoms/NotAllAtomsInsideSphereAction.def \ 313 Actions/SelectionAction/Atoms/NotAllAtomsOfMoleculeAction.def \ 314 Actions/SelectionAction/Atoms/NotAtomByElementAction.def \ 315 Actions/SelectionAction/Atoms/NotAtomByIdAction.def 314 316 315 317 SELECTIONMOLECULEACTIONSOURCE = \ 316 317 318 319 320 321 322 323 324 325 326 327 328 318 Actions/SelectionAction/Molecules/AllMoleculesAction.cpp \ 319 Actions/SelectionAction/Molecules/ClearAllMoleculesAction.cpp \ 320 Actions/SelectionAction/Molecules/MoleculeByFormulaAction.cpp \ 321 Actions/SelectionAction/Molecules/MoleculeByIdAction.cpp \ 322 Actions/SelectionAction/Molecules/MoleculeByNameAction.cpp \ 323 Actions/SelectionAction/Molecules/MoleculeByOrderAction.cpp \ 324 Actions/SelectionAction/Molecules/MoleculeOfAtomAction.cpp \ 325 Actions/SelectionAction/Molecules/NotAllMoleculesAction.cpp \ 326 Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.cpp \ 327 Actions/SelectionAction/Molecules/NotMoleculeByIdAction.cpp \ 328 Actions/SelectionAction/Molecules/NotMoleculeByNameAction.cpp \ 329 Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.cpp \ 330 Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.cpp 329 331 SELECTIONMOLECULEACTIONHEADER = \ 330 331 332 333 334 335 336 337 338 339 340 341 342 332 Actions/SelectionAction/Molecules/AllMoleculesAction.hpp \ 333 Actions/SelectionAction/Molecules/ClearAllMoleculesAction.hpp \ 334 Actions/SelectionAction/Molecules/MoleculeByFormulaAction.hpp \ 335 Actions/SelectionAction/Molecules/MoleculeByIdAction.hpp \ 336 Actions/SelectionAction/Molecules/MoleculeByNameAction.hpp \ 337 Actions/SelectionAction/Molecules/MoleculeByOrderAction.hpp \ 338 Actions/SelectionAction/Molecules/MoleculeOfAtomAction.hpp \ 339 Actions/SelectionAction/Molecules/NotAllMoleculesAction.hpp \ 340 Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.hpp \ 341 Actions/SelectionAction/Molecules/NotMoleculeByIdAction.hpp \ 342 Actions/SelectionAction/Molecules/NotMoleculeByNameAction.hpp \ 343 Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.hpp \ 344 Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.hpp 343 345 SELECTIONMOLECULEACTIONDEFS = \ 344 345 346 347 348 349 350 351 352 353 354 355 356 346 Actions/SelectionAction/Molecules/AllMoleculesAction.def \ 347 Actions/SelectionAction/Molecules/ClearAllMoleculesAction.def \ 348 Actions/SelectionAction/Molecules/MoleculeByFormulaAction.def \ 349 Actions/SelectionAction/Molecules/MoleculeByIdAction.def \ 350 Actions/SelectionAction/Molecules/MoleculeByNameAction.def \ 351 Actions/SelectionAction/Molecules/MoleculeByOrderAction.def \ 352 Actions/SelectionAction/Molecules/MoleculeOfAtomAction.def \ 353 Actions/SelectionAction/Molecules/NotAllMoleculesAction.def \ 354 Actions/SelectionAction/Molecules/NotMoleculeByFormulaAction.def \ 355 Actions/SelectionAction/Molecules/NotMoleculeByIdAction.def \ 356 Actions/SelectionAction/Molecules/NotMoleculeByNameAction.def \ 357 Actions/SelectionAction/Molecules/NotMoleculeByOrderAction.def \ 358 Actions/SelectionAction/Molecules/NotMoleculeOfAtomAction.def 357 359 358 360 TESSELATIONACTIONSOURCE = \ -
src/Makefile.am
r4269ca r48d3c0 274 274 cleanUp.cpp \ 275 275 cleanUp.hpp \ 276 Actions/Action_impl_python.hpp \ 277 Actions/GlobalListOfActions.hpp \ 278 Actions/ActionHistory.hpp \ 276 279 Actions/pyMoleCuilder.cpp 277 280 pyMoleCuilder_la_CPPFLAGS = ${BOOST_CPPFLAGS} ${CodePatterns_CFLAGS} -I$(PYTHON_INCLUDE_DIR)
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