Changeset 456e78
- Timestamp:
- Dec 16, 2010, 11:45:30 PM (14 years ago)
- Branches:
- Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
- Children:
- d766b5
- Parents:
- f7c0c4
- git-author:
- Frederik Heber <heber@…> (12/15/10 18:32:19)
- git-committer:
- Frederik Heber <heber@…> (12/16/10 23:45:30)
- Location:
- src
- Files:
-
- 3 deleted
- 2 edited
Legend:
- Unmodified
- Added
- Removed
-
src/molecule_dynamics.cpp
rf7c0c4 r456e78 484 484 atoms.end(), 485 485 boost::bind(&atom::EvaluateConstrainedForce,_1,startstep,endstep,PermutationMap,Force)); 486 //ActOnAllAtoms( &atom::EvaluateConstrainedForce, startstep, endstep, PermutationMap, Force );487 486 DoLog(1) && (Log() << Verbose(1) << "done." << endl); 488 487 }; … … 617 616 // and perform Verlet integration for each atom with position, velocity and force vector 618 617 // check size of vectors 619 //ActOnAllAtoms( &atom::ResizeTrajectory, MDSteps+10 );620 618 for_each(atoms.begin(), 621 619 atoms.end(), -
src/unittests/Makefile.am
rf7c0c4 r456e78 13 13 14 14 TESTS = \ 15 ActOnAllUnitTest \16 15 AnalysisBondsUnitTests \ 17 16 AnalysisCorrelationToPointUnitTest \ … … 73 72 TESTSOURCES = \ 74 73 ../Actions/unittests/ActionRegistryUnitTest.cpp \ 75 ActOnAllUnitTest.cpp \76 74 ../Actions/unittests/ActionSequenceUnitTest.cpp \ 77 75 analysisbondsunittest.cpp \ … … 114 112 TESTHEADERS = \ 115 113 ../Actions/unittests/ActionRegistryUnitTest.hpp \ 116 ActOnAllUnitTest.hpp \117 114 ../Actions/unittests/ActionSequenceUnitTest.hpp \ 118 115 analysisbondsunittest.hpp \ … … 155 152 156 153 157 ActOnAllUnitTest_SOURCES = UnitTestMain.cpp ../test/ActOnAllTest.hpp ActOnAllUnitTest.cpp ActOnAllUnitTest.hpp158 ActOnAllUnitTest_LDADD = ${ALLLIBS}159 160 154 AnalysisBondsUnitTests_SOURCES = UnitTestMain.cpp analysisbondsunittest.cpp analysisbondsunittest.hpp 161 155 AnalysisBondsUnitTests_LDADD = ${ALLLIBS}
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