Ignore:
Timestamp:
Mar 2, 2017, 12:28:36 PM (8 years ago)
Author:
Frederik Heber <heber@…>
Branches:
Action_Thermostats, Add_AtomRandomPerturbation, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_StructOpt_integration_tests, AutomationFragmentation_failures, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_ChronosMutex, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, GeometryObjects, Gui_displays_atomic_force_velocity, IndependentFragmentGrids_IntegrationTest, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, RotateToPrincipalAxisSystem_UndoRedo, StoppableMakroAction, Subpackage_levmar, Subpackage_vmg, ThirdParty_MPQC_rebuilt_buildsystem, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, Ubuntu_1604_changes, stable
Children:
e2a57d
Parents:
318d5a
git-author:
Frederik Heber <heber@…> (02/08/17 21:37:21)
git-committer:
Frederik Heber <heber@…> (03/02/17 12:28:36)
Message:

Split SOURCES and HEADERS and prepended subdir.

Location:
ThirdParty/mpqc_open/src
Files:
1 deleted
29 edited

Legend:

Unmodified
Added
Removed
  • ThirdParty/mpqc_open/src/Makefile.am

    r318d5a r23612c  
    1 AM_CPPFLAGS = -I$(top_srcdir)/include -I$(top_srcdir)/src/lib
    2 
    31LIBCAPITALNAMESOURCES = \
    42        LIBSOURCES
  • ThirdParty/mpqc_open/src/lib/chemistry/cca/Makefile.am

    r318d5a r23612c  
    11LIBSCCCASOURCES = \
    2                 basis_cca_to_sc.cc except.cc MPQC_Chemistry_Molecule_Impl.cc MPQC_Chemistry_MoleculeViewer_Impl.cc MPQC_ChemistryOpt_CoordinateModel_Impl.cc MPQC_Chemistry_QC_ModelFactory_Impl.cc MPQC_Chemistry_QC_Model_Impl.cc MPQC_ComponentClassDescription_Impl.cc MPQC_ComponentFactory_Impl.cc MPQC_GaussianBasis_Atomic_Impl.cc MPQC_GaussianBasis_Molecular_Impl.cc MPQC_GaussianBasis_Shell_Impl.cc MPQC_IntegralEvaluator2_Impl.cc MPQC_IntegralEvaluator3_Impl.cc MPQC_IntegralEvaluator4_Impl.cc MPQC_IntegralEvaluatorFactory_Impl.cc MPQC_Physics_Units_Impl.cc MPQC_SimpleDriver_Impl.cc socket.cc
     2        chemistry/cca/basis_cca_to_sc.cc \
     3        chemistry/cca/except.cc \
     4        chemistry/cca/MPQC_Chemistry_Molecule_Impl.cc \
     5        chemistry/cca/MPQC_Chemistry_MoleculeViewer_Impl.cc \
     6        chemistry/cca/MPQC_ChemistryOpt_CoordinateModel_Impl.cc \
     7        chemistry/cca/MPQC_Chemistry_QC_ModelFactory_Impl.cc \
     8        chemistry/cca/MPQC_Chemistry_QC_Model_Impl.cc \
     9        chemistry/cca/MPQC_ComponentClassDescription_Impl.cc \
     10        chemistry/cca/MPQC_ComponentFactory_Impl.cc \
     11        chemistry/cca/MPQC_GaussianBasis_Atomic_Impl.cc \
     12        chemistry/cca/MPQC_GaussianBasis_Molecular_Impl.cc \
     13        chemistry/cca/MPQC_GaussianBasis_Shell_Impl.cc \
     14        chemistry/cca/MPQC_IntegralEvaluator2_Impl.cc \
     15        chemistry/cca/MPQC_IntegralEvaluator3_Impl.cc \
     16        chemistry/cca/MPQC_IntegralEvaluator4_Impl.cc \
     17        chemistry/cca/MPQC_IntegralEvaluatorFactory_Impl.cc \
     18        chemistry/cca/MPQC_Physics_Units_Impl.cc \
     19        chemistry/cca/MPQC_SimpleDriver_Impl.cc \
     20        chemistry/cca/socket.cc
     21
    322
    423LIBSCCCAHEADERS = \
    5                 ccaiter.h except.h LIBS.h MPQC_Chemistry_Molecule_Impl.hh MPQC_Chemistry_MoleculeViewer_Impl.hh MPQC_ChemistryOpt_CoordinateModel_Impl.hh MPQC_Chemistry_QC_ModelFactory_Impl.hh MPQC_Chemistry_QC_Model_Impl.hh MPQC_ComponentClassDescription_Impl.hh MPQC_ComponentFactory_Impl.hh MPQC_GaussianBasis_Atomic_Impl.hh MPQC_GaussianBasis_Molecular_Impl.hh MPQC_GaussianBasis_Shell_Impl.hh MPQC_IntegralEvaluator2_Impl.hh MPQC_IntegralEvaluator3_Impl.hh MPQC_IntegralEvaluator4_Impl.hh MPQC_IntegralEvaluatorFactory_Impl.hh MPQC_Physics_Units_Impl.hh MPQC_SimpleDriver_Impl.hh socket.h
     24        chemistry/cca/ccaiter.h \
     25        chemistry/cca/except.h \
     26        chemistry/cca/LIBS.h \
     27        chemistry/cca/MPQC_Chemistry_Molecule_Impl.hh \
     28        chemistry/cca/MPQC_Chemistry_MoleculeViewer_Impl.hh \
     29        chemistry/cca/MPQC_ChemistryOpt_CoordinateModel_Impl.hh \
     30        chemistry/cca/MPQC_Chemistry_QC_ModelFactory_Impl.hh \
     31        chemistry/cca/MPQC_Chemistry_QC_Model_Impl.hh \
     32        chemistry/cca/MPQC_ComponentClassDescription_Impl.hh \
     33        chemistry/cca/MPQC_ComponentFactory_Impl.hh \
     34        chemistry/cca/MPQC_GaussianBasis_Atomic_Impl.hh \
     35        chemistry/cca/MPQC_GaussianBasis_Molecular_Impl.hh \
     36        chemistry/cca/MPQC_GaussianBasis_Shell_Impl.hh \
     37        chemistry/cca/MPQC_IntegralEvaluator2_Impl.hh \
     38        chemistry/cca/MPQC_IntegralEvaluator3_Impl.hh \
     39        chemistry/cca/MPQC_IntegralEvaluator4_Impl.hh \
     40        chemistry/cca/MPQC_IntegralEvaluatorFactory_Impl.hh \
     41        chemistry/cca/MPQC_Physics_Units_Impl.hh \
     42        chemistry/cca/MPQC_SimpleDriver_Impl.hh \
     43        chemistry/cca/socket.h
     44
    645
    746lib_LTLIBRARIES +=
     
    4382#nodist_libSCcca_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4483
     84
  • ThirdParty/mpqc_open/src/lib/chemistry/molecule/Makefile.am

    r318d5a r23612c  
    11LIBSCMOLECULESOURCES = \
    2                 atominfo.cc bend.cc cartcoor.cc coor.cc energy.cc fdhess.cc formula.cc hess.cc imcoor.cc linip.cc linop.cc molecule.cc molfreq.cc molrender.cc molshape.cc molsymm.cc out.cc redund.cc simple.cc stors.cc stre.cc symmcoor.cc taylor.cc tors.cc
     2        chemistry/molecule/atominfo.cc \
     3        chemistry/molecule/bend.cc \
     4        chemistry/molecule/cartcoor.cc \
     5        chemistry/molecule/coor.cc \
     6        chemistry/molecule/energy.cc \
     7        chemistry/molecule/fdhess.cc \
     8        chemistry/molecule/formula.cc \
     9        chemistry/molecule/hess.cc \
     10        chemistry/molecule/imcoor.cc \
     11        chemistry/molecule/linip.cc \
     12        chemistry/molecule/linop.cc \
     13        chemistry/molecule/molecule.cc \
     14        chemistry/molecule/molfreq.cc \
     15        chemistry/molecule/molrender.cc \
     16        chemistry/molecule/molshape.cc \
     17        chemistry/molecule/molsymm.cc \
     18        chemistry/molecule/out.cc \
     19        chemistry/molecule/redund.cc \
     20        chemistry/molecule/simple.cc \
     21        chemistry/molecule/stors.cc \
     22        chemistry/molecule/stre.cc \
     23        chemistry/molecule/symmcoor.cc \
     24        chemistry/molecule/taylor.cc \
     25        chemistry/molecule/tors.cc
     26
    327
    428LIBSCMOLECULEHEADERS = \
    5                 atominfo.h coor.h energy.h fdhess.h formula.h hess.h linkage.h localdef.h molecule.h molfreq.h molrender.h molshape.h simple.h taylor.h
     29        chemistry/molecule/atominfo.h \
     30        chemistry/molecule/coor.h \
     31        chemistry/molecule/energy.h \
     32        chemistry/molecule/fdhess.h \
     33        chemistry/molecule/formula.h \
     34        chemistry/molecule/hess.h \
     35        chemistry/molecule/linkage.h \
     36        chemistry/molecule/localdef.h \
     37        chemistry/molecule/molecule.h \
     38        chemistry/molecule/molfreq.h \
     39        chemistry/molecule/molrender.h \
     40        chemistry/molecule/molshape.h \
     41        chemistry/molecule/simple.h \
     42        chemistry/molecule/taylor.h
     43
    644
    745lib_LTLIBRARIES +=
     
    4381#nodist_libSCmolecule_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4482
     83
    4584MOLECULETESTS = \
    4685        moltest \
     
    5594        libSCcontainer.la libSCref.la libSCmisc.la
    5695
    57 moltest_SOURCES = moltest.cc
     96moltest_SOURCES = \
     97        chemistry/molecule/moltest.cc
    5898moltest_LDADD = \
    5999        $(MOLECULELIBS)
    60100
    61 symmetrize_SOURCES = symmetrize.cc
     101symmetrize_SOURCES = \
     102        chemistry/molecule/symmetrize.cc
    62103symmetrize_LDADD = \
    63104        $(MOLECULELIBS)
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/basis/Makefile.am

    r318d5a r23612c  
    11LIBSCBASISSOURCES = \
    2                 aotoso.cc cartiter.cc dercent.cc distshpair.cc extent.cc files.cc gaussbas.cc gaussbaval.cc gaussshell.cc gaussshval.cc gpetite.cc integral.cc obint.cc orthog.cc petite.cc shellrot.cc sobasis.cc sointegral.cc symmint.cc tbint.cc transform.cc
     2        chemistry/qc/basis/aotoso.cc \
     3        chemistry/qc/basis/cartiter.cc \
     4        chemistry/qc/basis/dercent.cc \
     5        chemistry/qc/basis/distshpair.cc \
     6        chemistry/qc/basis/extent.cc \
     7        chemistry/qc/basis/files.cc \
     8        chemistry/qc/basis/gaussbas.cc \
     9        chemistry/qc/basis/gaussbaval.cc \
     10        chemistry/qc/basis/gaussshell.cc \
     11        chemistry/qc/basis/gaussshval.cc \
     12        chemistry/qc/basis/gpetite.cc \
     13        chemistry/qc/basis/integral.cc \
     14        chemistry/qc/basis/obint.cc \
     15        chemistry/qc/basis/orthog.cc \
     16        chemistry/qc/basis/petite.cc \
     17        chemistry/qc/basis/shellrot.cc \
     18        chemistry/qc/basis/sobasis.cc \
     19        chemistry/qc/basis/sointegral.cc \
     20        chemistry/qc/basis/symmint.cc \
     21        chemistry/qc/basis/tbint.cc \
     22        chemistry/qc/basis/transform.cc
     23
     24LIBSCBASISBUILTHEADERS = \
     25        chemistry/qc/basis/f77sym.h
    326
    427LIBSCBASISHEADERS = \
    5                 basis.h cartiter.h dercent.h distshpair.h extent.h files.h gaussbas.h gaussshell.h gpetite.h integral.h obint.h orthog.h petite.h shellrot.h sobasis.h sointegral.h symmint.h tbint.h transform.h
     28        chemistry/qc/basis/basis.h \
     29        chemistry/qc/basis/cartiter.h \
     30        chemistry/qc/basis/dercent.h \
     31        chemistry/qc/basis/distshpair.h \
     32        chemistry/qc/basis/extent.h \
     33        chemistry/qc/basis/files.h \
     34        chemistry/qc/basis/gaussbas.h \
     35        chemistry/qc/basis/gaussshell.h \
     36        chemistry/qc/basis/gpetite.h \
     37        chemistry/qc/basis/integral.h \
     38        chemistry/qc/basis/obint.h \
     39        chemistry/qc/basis/orthog.h \
     40        chemistry/qc/basis/petite.h \
     41        chemistry/qc/basis/shellrot.h \
     42        chemistry/qc/basis/sobasis.h \
     43        chemistry/qc/basis/sointegral.h \
     44        chemistry/qc/basis/symmint.h \
     45        chemistry/qc/basis/tbint.h \
     46        chemistry/qc/basis/transform.h
     47
    648
    749lib_LTLIBRARIES +=
     
    4385#nodist_libSCbasis_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4486
     87
    4588BASISTESTS = \
    4689        btest
     
    5497        libSCcontainer.la libSCref.la libSCmisc.la
    5598
    56 btest_SOURCES = btest.cc
     99btest_SOURCES = \
     100        chemistry/qc/basis/btest.cc
    57101btest_LDADD = \
    58102        $(BASISLIBS)
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/cints/Makefile.am

    r318d5a r23612c  
    11LIBSCCINTSSOURCES = \
    2                 cints.cc comp_eri.cc comp_grt.cc edipole.cc equadrupole.cc eri.cc fjt.cc grt.cc hcore.cc int1e.cc int2e.cc kinetic.cc nuclear.cc obintcints.cc obosrr.cc overlap.cc permute2e.cc primpairs.cc shellpairs.cc storage.cc tbintcints.cc tform.cc
     2        chemistry/qc/cints/cints.cc \
     3        chemistry/qc/cints/comp_eri.cc \
     4        chemistry/qc/cints/comp_grt.cc \
     5        chemistry/qc/cints/edipole.cc \
     6        chemistry/qc/cints/equadrupole.cc \
     7        chemistry/qc/cints/eri.cc \
     8        chemistry/qc/cints/fjt.cc \
     9        chemistry/qc/cints/grt.cc \
     10        chemistry/qc/cints/hcore.cc \
     11        chemistry/qc/cints/int1e.cc \
     12        chemistry/qc/cints/int2e.cc \
     13        chemistry/qc/cints/kinetic.cc \
     14        chemistry/qc/cints/nuclear.cc \
     15        chemistry/qc/cints/obintcints.cc \
     16        chemistry/qc/cints/obosrr.cc \
     17        chemistry/qc/cints/overlap.cc \
     18        chemistry/qc/cints/permute2e.cc \
     19        chemistry/qc/cints/primpairs.cc \
     20        chemistry/qc/cints/shellpairs.cc \
     21        chemistry/qc/cints/storage.cc \
     22        chemistry/qc/cints/tbintcints.cc \
     23        chemistry/qc/cints/tform.cc
     24
    325
    426LIBSCCINTSHEADERS = \
    5                 cartit.h cints.h eri.h eri_quartet_data.h fjt.h grt.h grt_quartet_data.h int1e.h int2e.h linkage.h macros.h obintcints.h primpairs.h shellpairs.h static.h storage.h tbintcints.h tform.h
     27        chemistry/qc/cints/cartit.h \
     28        chemistry/qc/cints/cints.h \
     29        chemistry/qc/cints/eri.h \
     30        chemistry/qc/cints/eri_quartet_data.h \
     31        chemistry/qc/cints/fjt.h \
     32        chemistry/qc/cints/grt.h \
     33        chemistry/qc/cints/grt_quartet_data.h \
     34        chemistry/qc/cints/int1e.h \
     35        chemistry/qc/cints/int2e.h \
     36        chemistry/qc/cints/linkage.h \
     37        chemistry/qc/cints/macros.h \
     38        chemistry/qc/cints/obintcints.h \
     39        chemistry/qc/cints/primpairs.h \
     40        chemistry/qc/cints/shellpairs.h \
     41        chemistry/qc/cints/static.h \
     42        chemistry/qc/cints/storage.h \
     43        chemistry/qc/cints/tbintcints.h \
     44        chemistry/qc/cints/tform.h
     45
    646
    747lib_LTLIBRARIES +=
     
    4383#nodist_libSCcints_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4484
     85
    4586CINTSTESTS = \
    4687        cintstest
     
    5495        libSCcontainer.la libSCref.la libSCmisc.la
    5596
    56 cintstest_SOURCES = cintstest.cc
     97cintstest_SOURCES = \
     98        chemistry/qc/cints/cintstest.cc
    5799cintstest_LDADD = \
    58100        $(CINTSLIBS)
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/dft/Makefile.am

    r318d5a r23612c  
    11LIBSCDFTSOURCES = \
    2                 clks.cc functional.cc hsosks.cc integrator.cc tmplinst.cc uks.cc
     2        chemistry/qc/dft/clks.cc \
     3        chemistry/qc/dft/functional.cc \
     4        chemistry/qc/dft/hsosks.cc \
     5        chemistry/qc/dft/integrator.cc \
     6        chemistry/qc/dft/tmplinst.cc \
     7        chemistry/qc/dft/uks.cc
     8
    39
    410LIBSCDFTHEADERS = \
    5                 clks.h clkstmpl.h functional.h hsosks.h hsoskstmpl.h integrator.h linkage.h uks.h ukstmpl.h
     11        chemistry/qc/dft/clks.h \
     12        chemistry/qc/dft/clkstmpl.h \
     13        chemistry/qc/dft/functional.h \
     14        chemistry/qc/dft/hsosks.h \
     15        chemistry/qc/dft/hsoskstmpl.h \
     16        chemistry/qc/dft/integrator.h \
     17        chemistry/qc/dft/linkage.h \
     18        chemistry/qc/dft/uks.h \
     19        chemistry/qc/dft/ukstmpl.h
     20
    621
    722lib_LTLIBRARIES +=
     
    4358#nodist_libSCdft_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4459
     60
    4561DFTTESTS = \
    4662        dfttest \
     
    5571        libSCcontainer.la libSCref.la libSCmisc.la
    5672
    57 dfttest_SOURCES = dfttest.cc
     73dfttest_SOURCES = \
     74        chemistry/qc/dft/dfttest.cc
    5875dfttest_LDADD = \
    5976        $(DFTLIBS)
    6077
    61 lebedev_SOURCES = lebedev.cc
     78lebedev_SOURCES = \
     79        chemistry/qc/dft/lebedev.cc
    6280lebedev_LDADD = \
    6381        $(DFTLIBS)
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/intcca/Makefile.am

    r318d5a r23612c  
    11LIBSCINTCCASOURCES = \
    2                 int1e.cc int2e.cc intcca.cc obintcca.cc tbintcca.cc
     2        chemistry/qc/intcca/int1e.cc \
     3        chemistry/qc/intcca/int2e.cc \
     4        chemistry/qc/intcca/intcca.cc \
     5        chemistry/qc/intcca/obintcca.cc \
     6        chemistry/qc/intcca/tbintcca.cc
     7
    38
    49LIBSCINTCCAHEADERS = \
    5                 cartit.h int1e.h int2e.h intcca.h LIBS.h linkage.h macros.h obintcca.h tbintcca.h tform.h
     10        chemistry/qc/intcca/cartit.h \
     11        chemistry/qc/intcca/int1e.h \
     12        chemistry/qc/intcca/int2e.h \
     13        chemistry/qc/intcca/intcca.h \
     14        chemistry/qc/intcca/LIBS.h \
     15        chemistry/qc/intcca/linkage.h \
     16        chemistry/qc/intcca/macros.h \
     17        chemistry/qc/intcca/obintcca.h \
     18        chemistry/qc/intcca/tbintcca.h \
     19        chemistry/qc/intcca/tform.h
     20
    621
    722lib_LTLIBRARIES +=
     
    4358#nodist_libSCintcca_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4459
     60
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/intv3/Makefile.am

    r318d5a r23612c  
    11LIBSCINTV3SOURCES = \
    2                 array.cc atominfo.cc bounds.cc build2e.cc comp1e.cc comp2e3c.cc comp2e.cc fjt.cc init2e.cc int1e.cc int2e.cc intv3.cc obintv3.cc offsets.cc print2e.cc shift2e.cc storage.cc store.cc tbintv3.cc tformv3.cc
     2        chemistry/qc/intv3/array.cc \
     3        chemistry/qc/intv3/atominfo.cc \
     4        chemistry/qc/intv3/bounds.cc \
     5        chemistry/qc/intv3/build2e.cc \
     6        chemistry/qc/intv3/comp1e.cc \
     7        chemistry/qc/intv3/comp2e3c.cc \
     8        chemistry/qc/intv3/comp2e.cc \
     9        chemistry/qc/intv3/fjt.cc \
     10        chemistry/qc/intv3/init2e.cc \
     11        chemistry/qc/intv3/int1e.cc \
     12        chemistry/qc/intv3/int2e.cc \
     13        chemistry/qc/intv3/intv3.cc \
     14        chemistry/qc/intv3/obintv3.cc \
     15        chemistry/qc/intv3/offsets.cc \
     16        chemistry/qc/intv3/print2e.cc \
     17        chemistry/qc/intv3/shift2e.cc \
     18        chemistry/qc/intv3/storage.cc \
     19        chemistry/qc/intv3/store.cc \
     20        chemistry/qc/intv3/tbintv3.cc \
     21        chemistry/qc/intv3/tformv3.cc
    322
    423LIBSCINTV3HEADERS = \
    5                 array.h cartitv3.h fjt.h flags.h int1e.h int2e.h intv3.h macros.h obintv3.h storage.h tbintv3.h tformv3.h types.h utils.h
     24        chemistry/qc/intv3/array.h \
     25        chemistry/qc/intv3/cartitv3.h \
     26        chemistry/qc/intv3/fjt.h \
     27        chemistry/qc/intv3/flags.h \
     28        chemistry/qc/intv3/int1e.h \
     29        chemistry/qc/intv3/int2e.h \
     30        chemistry/qc/intv3/intv3.h \
     31        chemistry/qc/intv3/macros.h \
     32        chemistry/qc/intv3/obintv3.h \
     33        chemistry/qc/intv3/storage.h \
     34        chemistry/qc/intv3/tbintv3.h \
     35        chemistry/qc/intv3/tformv3.h \
     36        chemistry/qc/intv3/types.h \
     37        chemistry/qc/intv3/utils.h
     38
    639
    740lib_LTLIBRARIES +=
     
    4376#nodist_libSCintv3_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4477
     78
    4579INTV3TESTS = \
    4680        fjttest \
     
    5589        libSCcontainer.la libSCref.la libSCmisc.la
    5690
    57 fjttest_SOURCES = fjttest.cc
     91fjttest_SOURCES = \
     92        chemistry/qc/intv3/fjttest.cc
    5893fjttest_LDADD = \
    5994        $(INTV3LIBS)
    6095
    61 inttest_SOURCES = inttest.cc
     96inttest_SOURCES = \
     97        chemistry/qc/intv3/inttest.cc
    6298inttest_LDADD = \
    6399        $(INTV3LIBS)
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/mbpt/Makefile.am

    r318d5a r23612c  
    11LIBSCMBPTSOURCES = \
    2                 bzerofast.c cscphf.cc csgmat.cc csgrad34qb.cc csgrad.cc csgrade12.cc csgrads2pdm.cc hsosv1.cc hsosv1e1.cc hsosv2.cc hsosv2lb.cc mbpt.cc mp2extrap.cc util.cc
     2        chemistry/qc/mbpt/bzerofast.c \
     3        chemistry/qc/mbpt/cscphf.cc \
     4        chemistry/qc/mbpt/csgmat.cc \
     5        chemistry/qc/mbpt/csgrad34qb.cc \
     6        chemistry/qc/mbpt/csgrad.cc \
     7        chemistry/qc/mbpt/csgrade12.cc \
     8        chemistry/qc/mbpt/csgrads2pdm.cc \
     9        chemistry/qc/mbpt/hsosv1.cc \
     10        chemistry/qc/mbpt/hsosv1e1.cc \
     11        chemistry/qc/mbpt/hsosv2.cc \
     12        chemistry/qc/mbpt/hsosv2lb.cc \
     13        chemistry/qc/mbpt/mbpt.cc \
     14        chemistry/qc/mbpt/mp2extrap.cc \
     15        chemistry/qc/mbpt/util.cc
     16
    317
    418LIBSCMBPTHEADERS = \
    5                 bzerofast.h csgrad34qb.h csgrade12.h csgrads2pdm.h hsosv1e1.h linkage.h mbpt.h mp2extrap.h util.h
     19        chemistry/qc/mbpt/bzerofast.h \
     20        chemistry/qc/mbpt/csgrad34qb.h \
     21        chemistry/qc/mbpt/csgrade12.h \
     22        chemistry/qc/mbpt/csgrads2pdm.h \
     23        chemistry/qc/mbpt/hsosv1e1.h \
     24        chemistry/qc/mbpt/linkage.h \
     25        chemistry/qc/mbpt/mbpt.h \
     26        chemistry/qc/mbpt/mp2extrap.h \
     27        chemistry/qc/mbpt/util.h
     28
    629
    730lib_LTLIBRARIES +=
     
    4366#nodist_libSCmbpt_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4467
     68
    4569MBPTTESTS = \
    4670        mbpttest
     
    5478        libSCcontainer.la libSCref.la libSCmisc.la
    5579
    56 mbpttest_SOURCES = mbpttest.cc
     80mbpttest_SOURCES = \
     81        chemistry/qc/mbpt/mbpttest.cc
    5782mbpttest_LDADD = \
    5883        $(MBPTLIBS)
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/mbptr12/Makefile.am

    r318d5a r23612c  
    11LIBSCMBPTR12SOURCES = \
    2                 compute_a_gebc_abs1.cc compute_a_gebc.cc compute_a_gebc_vbs.cc compute_amps.cc compute_energy_a.cc compute_ijxy.cc compute_ikjy.cc compute_ixjy.cc compute_vxb_a_asymm.cc compute_vxb_a_symm.cc coulomb.cc dualbasis_mp2.cc ebc_contribs.cc exchange.cc fock.cc gbc_contribs.cc mbptr12.cc moindexspace.cc mp2r12_energy.cc multipole_ints.cc pairiter.cc r12_amps.cc r12ia.cc r12ia_memgrp.cc r12ia_mpiiofile.cc r12ia_node0file.cc r12int_eval.cc ri_basis.cc svd.cc transform_123inds.cc transform_12inds.cc transform_13inds.cc transform_factory.cc transform_ijxy.cc transform_ikjy.cc transform_ixjy.cc transform_tbint.cc twobodygrid.cc vxb_eval_info.cc
     2        chemistry/qc/mbptr12/compute_a_gebc_abs1.cc \
     3        chemistry/qc/mbptr12/compute_a_gebc.cc \
     4        chemistry/qc/mbptr12/compute_a_gebc_vbs.cc \
     5        chemistry/qc/mbptr12/compute_amps.cc \
     6        chemistry/qc/mbptr12/compute_energy_a.cc \
     7        chemistry/qc/mbptr12/compute_ijxy.cc \
     8        chemistry/qc/mbptr12/compute_ikjy.cc \
     9        chemistry/qc/mbptr12/compute_ixjy.cc \
     10        chemistry/qc/mbptr12/compute_vxb_a_asymm.cc \
     11        chemistry/qc/mbptr12/compute_vxb_a_symm.cc \
     12        chemistry/qc/mbptr12/coulomb.cc \
     13        chemistry/qc/mbptr12/dualbasis_mp2.cc \
     14        chemistry/qc/mbptr12/ebc_contribs.cc \
     15        chemistry/qc/mbptr12/exchange.cc \
     16        chemistry/qc/mbptr12/fock.cc \
     17        chemistry/qc/mbptr12/gbc_contribs.cc \
     18        chemistry/qc/mbptr12/mbptr12.cc \
     19        chemistry/qc/mbptr12/moindexspace.cc \
     20        chemistry/qc/mbptr12/mp2r12_energy.cc \
     21        chemistry/qc/mbptr12/multipole_ints.cc \
     22        chemistry/qc/mbptr12/pairiter.cc \
     23        chemistry/qc/mbptr12/r12_amps.cc \
     24        chemistry/qc/mbptr12/r12ia.cc \
     25        chemistry/qc/mbptr12/r12ia_memgrp.cc \
     26        chemistry/qc/mbptr12/r12ia_mpiiofile.cc \
     27        chemistry/qc/mbptr12/r12ia_node0file.cc \
     28        chemistry/qc/mbptr12/r12int_eval.cc \
     29        chemistry/qc/mbptr12/ri_basis.cc \
     30        chemistry/qc/mbptr12/svd.cc \
     31        chemistry/qc/mbptr12/transform_123inds.cc \
     32        chemistry/qc/mbptr12/transform_12inds.cc \
     33        chemistry/qc/mbptr12/transform_13inds.cc \
     34        chemistry/qc/mbptr12/transform_factory.cc \
     35        chemistry/qc/mbptr12/transform_ijxy.cc \
     36        chemistry/qc/mbptr12/transform_ikjy.cc \
     37        chemistry/qc/mbptr12/transform_ixjy.cc \
     38        chemistry/qc/mbptr12/transform_tbint.cc \
     39        chemistry/qc/mbptr12/twobodygrid.cc \
     40        chemistry/qc/mbptr12/vxb_eval_info.cc
     41
    342
    443LIBSCMBPTR12HEADERS = \
    5                 blas.h lapack.h linearr12.h linkage.h mbptr12.h moindexspace.h mp2r12_energy.h pairiter.h print_scmat_norms.h r12_amps.h r12ia.h r12ia_memgrp.h r12ia_mpiiofile.h r12ia_node0file.h r12int_eval.h svd.h transform_123inds.h transform_12inds.h transform_13inds.h transform_factory.h transform_ijxy.h transform_ikjy.h transform_ixjy.h transform_tbint.h twobodygrid.h vxb_eval_info.h
     44        chemistry/qc/mbptr12/blas.h \
     45        chemistry/qc/mbptr12/lapack.h \
     46        chemistry/qc/mbptr12/linearr12.h \
     47        chemistry/qc/mbptr12/linkage.h \
     48        chemistry/qc/mbptr12/mbptr12.h \
     49        chemistry/qc/mbptr12/moindexspace.h \
     50        chemistry/qc/mbptr12/mp2r12_energy.h \
     51        chemistry/qc/mbptr12/pairiter.h \
     52        chemistry/qc/mbptr12/print_scmat_norms.h \
     53        chemistry/qc/mbptr12/r12_amps.h \
     54        chemistry/qc/mbptr12/r12ia.h \
     55        chemistry/qc/mbptr12/r12ia_memgrp.h \
     56        chemistry/qc/mbptr12/r12ia_mpiiofile.h \
     57        chemistry/qc/mbptr12/r12ia_node0file.h \
     58        chemistry/qc/mbptr12/r12int_eval.h \
     59        chemistry/qc/mbptr12/svd.h \
     60        chemistry/qc/mbptr12/transform_123inds.h \
     61        chemistry/qc/mbptr12/transform_12inds.h \
     62        chemistry/qc/mbptr12/transform_13inds.h \
     63        chemistry/qc/mbptr12/transform_factory.h \
     64        chemistry/qc/mbptr12/transform_ijxy.h \
     65        chemistry/qc/mbptr12/transform_ikjy.h \
     66        chemistry/qc/mbptr12/transform_ixjy.h \
     67        chemistry/qc/mbptr12/transform_tbint.h \
     68        chemistry/qc/mbptr12/twobodygrid.h \
     69        chemistry/qc/mbptr12/vxb_eval_info.h
     70
    671
    772lib_LTLIBRARIES +=
     
    43108#nodist_libSCmbptr12_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    44109
     110
    45111MBPTR12TESTS = \
    46112        mbptr12test
     
    54120        libSCcontainer.la libSCref.la libSCmisc.la
    55121
    56 mbptr12test_SOURCES = mbptr12test.cc
     122mbptr12test_SOURCES = \
     123        chemistry/qc/mbptr12/mbptr12test.cc
    57124mbptr12test_LDADD = \
    58125        $(MBPTR12LIBS)
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/oint3/Makefile.am

    r318d5a r23612c  
    11LIBSCOINT3SOURCES = \
    2                 build.cc i0100AB.cc i0100.cc i0101AB.cc i0101.cc i0111AB.cc i0111.cc i0200AB.cc i0200.cc i0201AB.cc i0201.cc i0202AB.cc i0202.cc i0211AB.cc i0211.cc i0212AB.cc i0212.cc i0222AB.cc i0222.cc i0300AB.cc i0300.cc i0301AB.cc i0301.cc i0302AB.cc i0302.cc i0303AB.cc i0303.cc i0311AB.cc i0311.cc i0312AB.cc i0312.cc i0313AB.cc i0313.cc i0322AB.cc i0322.cc i0323AB.cc i0323.cc i0333AB.cc i0333.cc i1100AB.cc i1100.cc i1111AB.cc i1111.cc i1200AB.cc i1200.cc i1201AB.cc i1201.cc i1211AB.cc i1211.cc i1212AB.cc i1212.cc i1222AB.cc i1222.cc i1300AB.cc i1300.cc i1301AB.cc i1301.cc i1302AB.cc i1302.cc i1311AB.cc i1311.cc i1312AB.cc i1312.cc i1313AB.cc i1313.cc i1322AB.cc i1322.cc i1323AB.cc i1323.cc i1333AB.cc i1333.cc i2200AB.cc i2200.cc i2201AB.cc i2201.cc i2211AB.cc i2211.cc i2222AB.cc i2222.cc i2300AB.cc i2300.cc i2301AB.cc i2301.cc i2302AB.cc i2302.cc i2311AB.cc i2311.cc i2312AB.cc i2312.cc i2322AB.cc i2322.cc i2323AB.cc i2323.cc i2333AB.cc i2333.cc i3300AB.cc i3300.cc i3301AB.cc i3301.cc i3302AB.cc i3302.cc i3311AB.cc i3311.cc i3312AB.cc i3312.cc i3322AB.cc i3322.cc i3333AB.cc i3333.cc
     2        chemistry/qc/oint3/build.cc \
     3        chemistry/qc/oint3/i0100AB.cc \
     4        chemistry/qc/oint3/i0100.cc \
     5        chemistry/qc/oint3/i0101AB.cc \
     6        chemistry/qc/oint3/i0101.cc \
     7        chemistry/qc/oint3/i0111AB.cc \
     8        chemistry/qc/oint3/i0111.cc \
     9        chemistry/qc/oint3/i0200AB.cc \
     10        chemistry/qc/oint3/i0200.cc \
     11        chemistry/qc/oint3/i0201AB.cc \
     12        chemistry/qc/oint3/i0201.cc \
     13        chemistry/qc/oint3/i0202AB.cc \
     14        chemistry/qc/oint3/i0202.cc \
     15        chemistry/qc/oint3/i0211AB.cc \
     16        chemistry/qc/oint3/i0211.cc \
     17        chemistry/qc/oint3/i0212AB.cc \
     18        chemistry/qc/oint3/i0212.cc \
     19        chemistry/qc/oint3/i0222AB.cc \
     20        chemistry/qc/oint3/i0222.cc \
     21        chemistry/qc/oint3/i0300AB.cc \
     22        chemistry/qc/oint3/i0300.cc \
     23        chemistry/qc/oint3/i0301AB.cc \
     24        chemistry/qc/oint3/i0301.cc \
     25        chemistry/qc/oint3/i0302AB.cc \
     26        chemistry/qc/oint3/i0302.cc \
     27        chemistry/qc/oint3/i0303AB.cc \
     28        chemistry/qc/oint3/i0303.cc \
     29        chemistry/qc/oint3/i0311AB.cc \
     30        chemistry/qc/oint3/i0311.cc \
     31        chemistry/qc/oint3/i0312AB.cc \
     32        chemistry/qc/oint3/i0312.cc \
     33        chemistry/qc/oint3/i0313AB.cc \
     34        chemistry/qc/oint3/i0313.cc \
     35        chemistry/qc/oint3/i0322AB.cc \
     36        chemistry/qc/oint3/i0322.cc \
     37        chemistry/qc/oint3/i0323AB.cc \
     38        chemistry/qc/oint3/i0323.cc \
     39        chemistry/qc/oint3/i0333AB.cc \
     40        chemistry/qc/oint3/i0333.cc \
     41        chemistry/qc/oint3/i1100AB.cc \
     42        chemistry/qc/oint3/i1100.cc \
     43        chemistry/qc/oint3/i1111AB.cc \
     44        chemistry/qc/oint3/i1111.cc \
     45        chemistry/qc/oint3/i1200AB.cc \
     46        chemistry/qc/oint3/i1200.cc \
     47        chemistry/qc/oint3/i1201AB.cc \
     48        chemistry/qc/oint3/i1201.cc \
     49        chemistry/qc/oint3/i1211AB.cc \
     50        chemistry/qc/oint3/i1211.cc \
     51        chemistry/qc/oint3/i1212AB.cc \
     52        chemistry/qc/oint3/i1212.cc \
     53        chemistry/qc/oint3/i1222AB.cc \
     54        chemistry/qc/oint3/i1222.cc \
     55        chemistry/qc/oint3/i1300AB.cc \
     56        chemistry/qc/oint3/i1300.cc \
     57        chemistry/qc/oint3/i1301AB.cc \
     58        chemistry/qc/oint3/i1301.cc \
     59        chemistry/qc/oint3/i1302AB.cc \
     60        chemistry/qc/oint3/i1302.cc \
     61        chemistry/qc/oint3/i1311AB.cc \
     62        chemistry/qc/oint3/i1311.cc \
     63        chemistry/qc/oint3/i1312AB.cc \
     64        chemistry/qc/oint3/i1312.cc \
     65        chemistry/qc/oint3/i1313AB.cc \
     66        chemistry/qc/oint3/i1313.cc \
     67        chemistry/qc/oint3/i1322AB.cc \
     68        chemistry/qc/oint3/i1322.cc \
     69        chemistry/qc/oint3/i1323AB.cc \
     70        chemistry/qc/oint3/i1323.cc \
     71        chemistry/qc/oint3/i1333AB.cc \
     72        chemistry/qc/oint3/i1333.cc \
     73        chemistry/qc/oint3/i2200AB.cc \
     74        chemistry/qc/oint3/i2200.cc \
     75        chemistry/qc/oint3/i2201AB.cc \
     76        chemistry/qc/oint3/i2201.cc \
     77        chemistry/qc/oint3/i2211AB.cc \
     78        chemistry/qc/oint3/i2211.cc \
     79        chemistry/qc/oint3/i2222AB.cc \
     80        chemistry/qc/oint3/i2222.cc \
     81        chemistry/qc/oint3/i2300AB.cc \
     82        chemistry/qc/oint3/i2300.cc \
     83        chemistry/qc/oint3/i2301AB.cc \
     84        chemistry/qc/oint3/i2301.cc \
     85        chemistry/qc/oint3/i2302AB.cc \
     86        chemistry/qc/oint3/i2302.cc \
     87        chemistry/qc/oint3/i2311AB.cc \
     88        chemistry/qc/oint3/i2311.cc \
     89        chemistry/qc/oint3/i2312AB.cc \
     90        chemistry/qc/oint3/i2312.cc \
     91        chemistry/qc/oint3/i2322AB.cc \
     92        chemistry/qc/oint3/i2322.cc \
     93        chemistry/qc/oint3/i2323AB.cc \
     94        chemistry/qc/oint3/i2323.cc \
     95        chemistry/qc/oint3/i2333AB.cc \
     96        chemistry/qc/oint3/i2333.cc \
     97        chemistry/qc/oint3/i3300AB.cc \
     98        chemistry/qc/oint3/i3300.cc \
     99        chemistry/qc/oint3/i3301AB.cc \
     100        chemistry/qc/oint3/i3301.cc \
     101        chemistry/qc/oint3/i3302AB.cc \
     102        chemistry/qc/oint3/i3302.cc \
     103        chemistry/qc/oint3/i3311AB.cc \
     104        chemistry/qc/oint3/i3311.cc \
     105        chemistry/qc/oint3/i3312AB.cc \
     106        chemistry/qc/oint3/i3312.cc \
     107        chemistry/qc/oint3/i3322AB.cc \
     108        chemistry/qc/oint3/i3322.cc \
     109        chemistry/qc/oint3/i3333AB.cc \
     110        chemistry/qc/oint3/i3333.cc
     111
    3112
    4113LIBSCOINT3HEADERS = \
    5                 build.h LIBS.h
     114        chemistry/qc/oint3/build.h
     115
    6116
    7117lib_LTLIBRARIES +=
     
    43153#nodist_libSCoint3_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    44154
     155
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/psi/Makefile.am

    r318d5a r23612c  
    11LIBSCPSISOURCES = \
    2                 psiexenv.cc psifile11.cc psiinput.cc psiwfn.cc
     2        chemistry/qc/psi/psiexenv.cc \
     3        chemistry/qc/psi/psifile11.cc \
     4        chemistry/qc/psi/psiinput.cc \
     5        chemistry/qc/psi/psiwfn.cc
     6
    37
    48LIBSCPSIHEADERS = \
    5                 linkage.h psiexenv.h psifile11.h psiinput.h psiwfn.h
     9        chemistry/qc/psi/linkage.h \
     10        chemistry/qc/psi/psiexenv.h \
     11        chemistry/qc/psi/psifile11.h \
     12        chemistry/qc/psi/psiinput.h \
     13        chemistry/qc/psi/psiwfn.h
     14
    615
    716lib_LTLIBRARIES +=
     
    4352#nodist_libSCpsi_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4453
     54
    4555PSITESTS = \
    4656        psitest
     
    5464        libSCcontainer.la libSCref.la libSCmisc.la
    5565
    56 psitest_SOURCES = psitest.cc
     66psitest_SOURCES = \
     67        chemistry/qc/psi/psitest.cc
    5768psitest_LDADD = \
    5869        $(PSILIBS)
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/scf/Makefile.am

    r318d5a r23612c  
    11LIBSCSCFSOURCES = \
    2                 clhf.cc clscf.cc effh.cc hsoshf.cc hsosscf.cc osshf.cc ossscf.cc scf.cc scfgradient.cc scfops.cc scfvector.cc svd.cc tchf.cc tcscf.cc tmplinst.cc uhf.cc uscf.cc
     2        chemistry/qc/scf/clhf.cc \
     3        chemistry/qc/scf/clscf.cc \
     4        chemistry/qc/scf/effh.cc \
     5        chemistry/qc/scf/hsoshf.cc \
     6        chemistry/qc/scf/hsosscf.cc \
     7        chemistry/qc/scf/osshf.cc \
     8        chemistry/qc/scf/ossscf.cc \
     9        chemistry/qc/scf/scf.cc \
     10        chemistry/qc/scf/scfgradient.cc \
     11        chemistry/qc/scf/scfops.cc \
     12        chemistry/qc/scf/scfvector.cc \
     13        chemistry/qc/scf/svd.cc \
     14        chemistry/qc/scf/tchf.cc \
     15        chemistry/qc/scf/tcscf.cc \
     16        chemistry/qc/scf/tmplinst.cc \
     17        chemistry/qc/scf/uhf.cc \
     18        chemistry/qc/scf/uscf.cc
     19
    320
    421LIBSCSCFHEADERS = \
    5                 clhf.h clhftmpl.h clscf.h effh.h gbuild.h hsoshf.h hsoshftmpl.h hsosscf.h lbgbuild.h lgbuild.h linkage.h ltbgrad.h osshf.h osshftmpl.h ossscf.h scf.h scflocal.h scfops.h tbgrad.h tchf.h tchftmpl.h tcscf.h uhf.h uhftmpl.h uscf.h
     22        chemistry/qc/scf/clhf.h \
     23        chemistry/qc/scf/clhftmpl.h \
     24        chemistry/qc/scf/clscf.h \
     25        chemistry/qc/scf/effh.h \
     26        chemistry/qc/scf/gbuild.h \
     27        chemistry/qc/scf/hsoshf.h \
     28        chemistry/qc/scf/hsoshftmpl.h \
     29        chemistry/qc/scf/hsosscf.h \
     30        chemistry/qc/scf/lbgbuild.h \
     31        chemistry/qc/scf/lgbuild.h \
     32        chemistry/qc/scf/linkage.h \
     33        chemistry/qc/scf/ltbgrad.h \
     34        chemistry/qc/scf/osshf.h \
     35        chemistry/qc/scf/osshftmpl.h \
     36        chemistry/qc/scf/ossscf.h \
     37        chemistry/qc/scf/scf.h \
     38        chemistry/qc/scf/scflocal.h \
     39        chemistry/qc/scf/scfops.h \
     40        chemistry/qc/scf/tbgrad.h \
     41        chemistry/qc/scf/tchf.h \
     42        chemistry/qc/scf/tchftmpl.h \
     43        chemistry/qc/scf/tcscf.h \
     44        chemistry/qc/scf/uhf.h \
     45        chemistry/qc/scf/uhftmpl.h \
     46        chemistry/qc/scf/uscf.h
     47
    648
    749lib_LTLIBRARIES +=
     
    4385#nodist_libSCscf_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4486
     87
    4588SCFTESTS = \
    4689        scftest
     
    5497        libSCcontainer.la libSCref.la libSCmisc.la
    5598
    56 scftest_SOURCES = scftest.cc
     99scftest_SOURCES = \
     100        chemistry/qc/scf/scftest.cc
    57101scftest_LDADD = \
    58102        $(SCFLIBS)
  • ThirdParty/mpqc_open/src/lib/chemistry/qc/wfn/Makefile.am

    r318d5a r23612c  
    11LIBSCWFNSOURCES = \
    2                 accum.cc density.cc densval.cc eht.cc hcorewfn.cc nao.cc natorbval.cc obwfn.cc orbital.cc solvent.cc wfn.cc
     2        chemistry/qc/wfn/accum.cc \
     3        chemistry/qc/wfn/density.cc \
     4        chemistry/qc/wfn/densval.cc \
     5        chemistry/qc/wfn/eht.cc \
     6        chemistry/qc/wfn/hcorewfn.cc \
     7        chemistry/qc/wfn/nao.cc \
     8        chemistry/qc/wfn/natorbval.cc \
     9        chemistry/qc/wfn/obwfn.cc \
     10        chemistry/qc/wfn/orbital.cc \
     11        chemistry/qc/wfn/solvent.cc \
     12        chemistry/qc/wfn/wfn.cc
     13
    314
    415LIBSCWFNHEADERS = \
    5                 accum.h density.h eht.h linkage.h obwfn.h orbital.h solvent.h wfn.h
     16        chemistry/qc/wfn/accum.h \
     17        chemistry/qc/wfn/density.h \
     18        chemistry/qc/wfn/eht.h \
     19        chemistry/qc/wfn/linkage.h \
     20        chemistry/qc/wfn/obwfn.h \
     21        chemistry/qc/wfn/orbital.h \
     22        chemistry/qc/wfn/solvent.h \
     23        chemistry/qc/wfn/wfn.h
     24
    625
    726lib_LTLIBRARIES +=
     
    4362#nodist_libSCwfn_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4463
     64
    4565WFNTESTS = \
    4666        wfntest
     
    5474        libSCcontainer.la libSCref.la libSCmisc.la
    5575
    56 wfntest_SOURCES = wfntest.cc
     76wfntest_SOURCES = \
     77        chemistry/qc/wfn/wfntest.cc
    5778wfntest_LDADD = \
    5879        $(WFNLIBS)
  • ThirdParty/mpqc_open/src/lib/chemistry/solvent/Makefile.am

    r318d5a r23612c  
    11LIBSCSOLVENTSOURCES = \
    2                 bem.cc disprep.cc
     2        chemistry/solvent/bem.cc \
     3        chemistry/solvent/disprep.cc
     4
    35
    46LIBSCSOLVENTHEADERS = \
    5                 bem.h
     7        chemistry/solvent/bem.h
     8
    69
    710lib_LTLIBRARIES +=
     
    4346#nodist_libSCsolvent_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4447
     48
    4549SOLVENTTESTS = \
    4650        bemtest
     
    5458        libSCcontainer.la libSCref.la libSCmisc.la
    5559
    56 bemtest_SOURCES = bemtest.cc
     60bemtest_SOURCES = \
     61        chemistry/solvent/bemtest.cc
    5762bemtest_LDADD = \
    5863        $(SOLVENTLIBS)
  • ThirdParty/mpqc_open/src/lib/math/isosurf/Makefile.am

    r318d5a r23612c  
    11LIBSCISOSURFSOURCES = \
    2                 edge.cc implicit.c isosurf.cc shape.cc surf.cc surfor.cc surfse.cc surfst.cc triangle.cc tricoef.cc vertex.cc volume.cc volume_i.cc
     2        math/isosurf/edge.cc \
     3        math/isosurf/implicit.c \
     4        math/isosurf/isosurf.cc \
     5        math/isosurf/shape.cc \
     6        math/isosurf/surf.cc \
     7        math/isosurf/surfor.cc \
     8        math/isosurf/surfse.cc \
     9        math/isosurf/surfst.cc \
     10        math/isosurf/triangle.cc \
     11        math/isosurf/tricoef.cc \
     12        math/isosurf/vertex.cc \
     13        math/isosurf/volume.cc \
     14        math/isosurf/volume_i.cc
     15
    316
    417LIBSCISOSURFHEADERS = \
    5                 edge.h implicit.h isosurf.h shape.h surf.h triangle.h tricoef.h vertex.h volume.h volume_i.h
     18        math/isosurf/edge.h \
     19        math/isosurf/implicit.h \
     20        math/isosurf/isosurf.h \
     21        math/isosurf/shape.h \
     22        math/isosurf/surf.h \
     23        math/isosurf/triangle.h \
     24        math/isosurf/tricoef.h \
     25        math/isosurf/vertex.h \
     26        math/isosurf/volume.h \
     27        math/isosurf/volume_i.h
     28
    629
    730lib_LTLIBRARIES +=
     
    4366#nodist_libSCisosurf_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4467
     68
    4569ISOSURFTESTS = \
    4670        tmplinst \
     
    5579        libSCcontainer.la libSCref.la libSCmisc.la
    5680
    57 tmplinst_SOURCES = tmplinst.cc
     81tmplinst_SOURCES = \
     82        math/isosurf/tmplinst.cc
    5883tmplinst_LDADD = \
    5984        $(ISOSURFLIBS)
    6085
    61 isotest_SOURCES = isotest.cc
     86isotest_SOURCES = \
     87        math/isosurf/isotest.cc
    6288isotest_LDADD = \
    6389        $(ISOSURFLIBS)
  • ThirdParty/mpqc_open/src/lib/math/optimize/Makefile.am

    r318d5a r23612c  
    11LIBSCOPTIMIZESOURCES = \
    2                 conv.cc dfp.cc diis.cc efc.cc function.cc gdiis.cc mcsearch.cc newton.cc opt.cc powell.cc qnewton.cc scextrap.cc scextrapmat.cc steep.cc transform.cc update.cc
     2        math/optimize/conv.cc \
     3        math/optimize/dfp.cc \
     4        math/optimize/diis.cc \
     5        math/optimize/efc.cc \
     6        math/optimize/function.cc \
     7        math/optimize/gdiis.cc \
     8        math/optimize/mcsearch.cc \
     9        math/optimize/newton.cc \
     10        math/optimize/opt.cc \
     11        math/optimize/powell.cc \
     12        math/optimize/qnewton.cc \
     13        math/optimize/scextrap.cc \
     14        math/optimize/scextrapmat.cc \
     15        math/optimize/steep.cc \
     16        math/optimize/transform.cc \
     17        math/optimize/update.cc
     18
    319
    420LIBSCOPTIMIZEHEADERS = \
    5                 conv.h diis.h efc.h function.h gdiis.h linkage.h mcsearch.h newton.h opt.h qnewton.h scextrap.h scextrapmat.h steep.h transform.h update.h
     21        math/optimize/conv.h \
     22        math/optimize/diis.h \
     23        math/optimize/efc.h \
     24        math/optimize/function.h \
     25        math/optimize/gdiis.h \
     26        math/optimize/linkage.h \
     27        math/optimize/mcsearch.h \
     28        math/optimize/newton.h \
     29        math/optimize/opt.h \
     30        math/optimize/qnewton.h \
     31        math/optimize/scextrap.h \
     32        math/optimize/scextrapmat.h \
     33        math/optimize/steep.h \
     34        math/optimize/transform.h \
     35        math/optimize/update.h
     36
    637
    738lib_LTLIBRARIES +=
     
    4374#nodist_libSCoptimize_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4475
     76
    4577OPTIMIZETESTS = \
    4678        opttest \
     
    5688        libSCcontainer.la libSCref.la libSCmisc.la
    5789
    58 opttest_SOURCES = opttest.cc
     90opttest_SOURCES = \
     91        math/optimize/opttest.cc
    5992opttest_LDADD = \
    6093        $(OPTIMIZELIBS)
    6194
    62 scextest_optimize_SOURCES = scextest.cc
     95scextest_optimize_SOURCES = \
     96        math/optimize/scextest.cc
    6397scextest_optimize_LDADD = \
    6498        $(OPTIMIZELIBS)
    6599
    66 kvopt_SOURCES = kvopt.cc
     100kvopt_SOURCES = \
     101        math/optimize/kvopt.cc
    67102kvopt_LDADD = \
    68103        $(OPTIMIZELIBS)
  • ThirdParty/mpqc_open/src/lib/math/scmat/Makefile.am

    r318d5a r23612c  
    11LIBSCSCMATSOURCES = \
    2                 abstract.cc blkiter.cc block.cc blocked.cc blockeddiag.cc blockedrect.cc blockedsymm.cc blockedvect.cc cmatrix.c dim.cc dist.cc distdiag.cc disthql.cc distrect.cc distsymm.cc distvect.cc elemop.cc local.cc localdiag.cc localrect.cc localsymm.cc localvect.cc matrix3.cc matrix.cc matrix_i.cc repl.cc repldiag.cc replrect.cc replsymm.cc replvect.cc result.cc svd.c util.cc vector3.cc vector3_i.cc
     2        math/scmat/abstract.cc \
     3        math/scmat/blkiter.cc \
     4        math/scmat/block.cc \
     5        math/scmat/blocked.cc \
     6        math/scmat/blockeddiag.cc \
     7        math/scmat/blockedrect.cc \
     8        math/scmat/blockedsymm.cc \
     9        math/scmat/blockedvect.cc \
     10        math/scmat/cmatrix.c \
     11        math/scmat/dim.cc \
     12        math/scmat/dist.cc \
     13        math/scmat/distdiag.cc \
     14        math/scmat/disthql.cc \
     15        math/scmat/distrect.cc \
     16        math/scmat/distsymm.cc \
     17        math/scmat/distvect.cc \
     18        math/scmat/elemop.cc \
     19        math/scmat/local.cc \
     20        math/scmat/localdiag.cc \
     21        math/scmat/localrect.cc \
     22        math/scmat/localsymm.cc \
     23        math/scmat/localvect.cc \
     24        math/scmat/matrix3.cc \
     25        math/scmat/matrix.cc \
     26        math/scmat/matrix_i.cc \
     27        math/scmat/repl.cc \
     28        math/scmat/repldiag.cc \
     29        math/scmat/replrect.cc \
     30        math/scmat/replsymm.cc \
     31        math/scmat/replvect.cc \
     32        math/scmat/result.cc \
     33        math/scmat/svd.c \
     34        math/scmat/util.cc \
     35        math/scmat/vector3.cc \
     36        math/scmat/vector3_i.cc
     37
    338
    439LIBSCSCMATHEADERS = \
    5                 abstract.h blkiter.h blocked.h block.h cmatrix.h dim.h dist.h disthql.h elemop.h linkage.h local.h matrix3.h matrix.h matrix_i.h mops.h offset.h repl.h result.h util.h vector3.h vector3_i.h
     40        math/scmat/abstract.h \
     41        math/scmat/blkiter.h \
     42        math/scmat/blocked.h \
     43        math/scmat/block.h \
     44        math/scmat/cmatrix.h \
     45        math/scmat/dim.h \
     46        math/scmat/dist.h \
     47        math/scmat/disthql.h \
     48        math/scmat/elemop.h \
     49        math/scmat/linkage.h \
     50        math/scmat/local.h \
     51        math/scmat/matrix3.h \
     52        math/scmat/matrix.h \
     53        math/scmat/matrix_i.h \
     54        math/scmat/mops.h \
     55        math/scmat/offset.h \
     56        math/scmat/repl.h \
     57        math/scmat/result.h \
     58        math/scmat/util.h \
     59        math/scmat/vector3.h \
     60        math/scmat/vector3_i.h
     61
    662
    763lib_LTLIBRARIES +=
     
    4399#nodist_libSCscmat_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    44100
     101
    45102SCMATTESTS = \
    46103        localtest \
     
    57114        libSCcontainer.la libSCref.la libSCmisc.la
    58115
    59 localtest_SOURCES = localtest.cc
     116localtest_SOURCES = \
     117        math/scmat/localtest.cc
    60118localtest_LDADD = \
    61119        $(SCMATLIBS)
    62120
    63 repltest_SOURCES = repltest.cc
     121repltest_SOURCES = \
     122        math/scmat/repltest.cc
    64123repltest_LDADD = \
    65124        $(SCMATLIBS)
    66125
    67 disttest_SOURCES = disttest.cc
     126disttest_SOURCES = \
     127        math/scmat/disttest.cc
    68128disttest_LDADD = \
    69129        $(SCMATLIBS)
    70130
    71 blockedtest_SOURCES = blockedtest.cc
     131blockedtest_SOURCES = \
     132        math/scmat/blockedtest.cc
    72133blockedtest_LDADD = \
    73134        $(SCMATLIBS)
  • ThirdParty/mpqc_open/src/lib/math/symmetry/Makefile.am

    r318d5a r23612c  
    11LIBSCSYMMETRYSOURCES = \
    2                 chartab.cc corrtab.cc ico.cc irrep.cc maketab.cc pointgrp.cc rep.cc symop.cc tetra.cc
     2        math/symmetry/chartab.cc \
     3        math/symmetry/corrtab.cc \
     4        math/symmetry/ico.cc \
     5        math/symmetry/irrep.cc \
     6        math/symmetry/maketab.cc \
     7        math/symmetry/pointgrp.cc \
     8        math/symmetry/rep.cc \
     9        math/symmetry/symop.cc \
     10        math/symmetry/tetra.cc
     11
    312
    413LIBSCSYMMETRYHEADERS = \
    5                 corrtab.h pointgrp.h
     14        math/symmetry/corrtab.h \
     15        math/symmetry/pointgrp.h
     16
    617
    718lib_LTLIBRARIES +=
     
    4354#nodist_libSCsymmetry_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4455
     56
    4557SYMMETRYTESTS = \
    4658        testpg
     
    5466        libSCcontainer.la libSCref.la libSCmisc.la
    5567
    56 testpg_SOURCES = testpg.cc
     68testpg_SOURCES = \
     69        math/symmetry/testpg.cc
    5770testpg_LDADD = \
    5871        $(SYMMETRYLIBS)
  • ThirdParty/mpqc_open/src/lib/util/class/Makefile.am

    r318d5a r23612c  
    11LIBSCCLASSSOURCES = \
    2                 class.cc scexception.cc
     2        util/class/class.cc \
     3        util/class/scexception.cc
     4
    35
    46LIBSCCLASSHEADERS = \
    5                 class.h proxy.h scexception.h
     7        util/class/class.h \
     8        util/class/proxy.h \
     9        util/class/scexception.h
     10
    611
    712lib_LTLIBRARIES +=
     
    4348#nodist_libSCclass_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4449
     50
    4551CLASSTESTS = \
    4652        classtest \
     
    5359        libSCclass.la libSCcontainer.la libSCref.la libSCmisc.la libSCstate.la libSCkeyval.la
    5460
    55 classtest_SOURCES = class.cc class.h classtest.cc
     61classtest_SOURCES = \
     62        util/class/class.cc \
     63        util/class/class.h \
     64        util/class/classtest.cc
    5665classtest_LDADD = $(CLASSLIBS)
    5766
    58 scextest_class_SOURCES = scextest.cc
     67scextest_class_SOURCES = \
     68        util/class/scextest.cc
    5969scextest_class_LDADD = $(CLASSLIBS)
    6070
  • ThirdParty/mpqc_open/src/lib/util/container/Makefile.am

    r318d5a r23612c  
    11LIBSCCONTAINERSOURCES = \
    2                 avl.cc bitarray.cc carray.cc
     2        util/container/avl.cc \
     3        util/container/bitarray.cc \
     4        util/container/carray.cc
     5
    36
    47LIBSCCONTAINERHEADERS = \
    5                 avlmap.h avlset.h bitarray.h carray.h compare.h eavlmmap.h LIBS.h
     8        util/container/avlmap.h \
     9        util/container/avlset.h \
     10        util/container/bitarray.h \
     11        util/container/carray.h \
     12        util/container/compare.h \
     13        util/container/eavlmmap.h
     14
    615
    716lib_LTLIBRARIES +=
     
    4352#nodist_libSCcontainer_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4453
     54
    4555CONTAINERTESTS = \
    4656        avltest
     
    5262        libSCmisc.la libSCkeyval.la libSCstate.la libSCclass.la libSCref.la libSCcontainer.la
    5363
    54 avltest_SOURCES = avltest.cc
     64avltest_SOURCES = \
     65        util/container/avltest.cc
     66 
    5567avltest_LDADD = $(CONTAINERLIBS)
  • ThirdParty/mpqc_open/src/lib/util/group/Makefile.am

    r318d5a r23612c  
    11LIBSCGROUPSOURCES = \
    2         message.cc messimpl.cc messproc.cc messint.cc \
    3         reduce.cc topology.cc hcube.cc \
    4         rnglock.cc memory.cc memmsg.cc pool.cc \
    5         memamsg.cc memproc.cc \
    6         pregtime.cc thread.cc memiter.cc memrdma.cc
    7 
    8 # file.cc fileproc.cc globcnt.cc hcube.cc memamsg.cc memarmci.cc memiter.cc memmsg.cc memmtmpi.cc memory.cc memproc.cc memrdma.cc memshm.cc message.cc messimpl.cc messint.cc messmpi.cc messproc.cc messshm.cc mstate.cc pool.cc pregtime.cc reduce.cc rnglock.cc thpthd.cc thpuma.cc thread.cc topology.cc
     2        util/group/message.cc \
     3        util/group/messimpl.cc \
     4        util/group/messproc.cc \
     5        util/group/messint.cc \
     6        util/group/reduce.cc \
     7        util/group/topology.cc \
     8        util/group/hcube.cc \
     9        util/group/rnglock.cc \
     10        util/group/memory.cc \
     11        util/group/memmsg.cc \
     12        util/group/pool.cc \
     13        util/group/memamsg.cc \
     14        util/group/memproc.cc \
     15        util/group/pregtime.cc \
     16        util/group/thread.cc \
     17        util/group/memiter.cc \
     18        util/group/memrdma.cc
     19
     20#       util/group/file.cc \
     21#       util/group/fileproc.cc \
     22#       util/group/globcnt.cc \
     23#       util/group/hcube.cc \
     24#       util/group/memamsg.cc \
     25#       util/group/memarmci.cc \
     26#       util/group/memiter.cc \
     27#       util/group/memmsg.cc \
     28#       util/group/memmtmpi.cc \
     29#       util/group/memory.cc \
     30#       util/group/memproc.cc \
     31#       util/group/memrdma.cc \
     32#       util/group/memshm.cc \
     33#       util/group/message.cc \
     34#       util/group/messimpl.cc \
     35#       util/group/messint.cc \
     36#       util/group/messmpi.cc \
     37#       util/group/messproc.cc \
     38#       util/group/messshm.cc \
     39#       util/group/mstate.cc \
     40#       util/group/pool.cc \
     41#       util/group/pregtime.cc \
     42#       util/group/reduce.cc \
     43#       util/group/rnglock.cc \
     44#       util/group/thpthd.cc \
     45#       util/group/thpuma.cc \
     46#       util/group/thread.cc \
     47#       util/group/topology.cc
     48
    949
    1050LIBSCGROUPHEADERS = \
    11         message.h \
    12         topology.h hcube.h \
    13         rnglock.h memory.h memmsg.h pool.h \
    14         memamsg.h memproc.h \
    15         pregtime.h thread.h memiter.h memrdma.h
    16 
     51        util/group/message.h \
     52        util/group/topology.h \
     53        util/group/hcube.h \
     54        util/group/rnglock.h \
     55        util/group/memory.h \
     56        util/group/memmsg.h \
     57        util/group/pool.h \
     58        util/group/memamsg.h \
     59        util/group/memproc.h \
     60        util/group/pregtime.h \
     61        util/group/thread.h \
     62        util/group/memiter.h \
     63        util/group/memrdma.h
    1764               
    18 # file.h fileproc.h globcnt.h hcube.h LIBS.h linkage.h memamsg.h memarmci.h memiter.h memmsg.h memmtmpi.h memory.h memproc.h memrdma.h memshm.h message.h messaget.h messmpi.h messshm.h mstate.h pool.h pregtime.h rnglock.h thpthd.h thpuma.h thread.h topology.h
     65#       util/group/file.h \
     66#       util/group/fileproc.h \
     67#       util/group/globcnt.h \
     68#       util/group/hcube.h \
     69#       util/group/LIBS.h \
     70#       util/group/linkage.h \
     71#       util/group/memamsg.h \
     72#       util/group/memarmci.h \
     73#       util/group/memiter.h \
     74#       util/group/memmsg.h \
     75#       util/group/memmtmpi.h \
     76#       util/group/memory.h \
     77#       util/group/memproc.h \
     78#       util/group/memrdma.h \
     79#       util/group/memshm.h \
     80#       util/group/message.h \
     81#       util/group/messaget.h \
     82#       util/group/messmpi.h \
     83#       util/group/messshm.h \
     84#       util/group/mstate.h \
     85#       util/group/pool.h \
     86#       util/group/pregtime.h \
     87#       util/group/rnglock.h \
     88#       util/group/thpthd.h \
     89#       util/group/thpuma.h \
     90#       util/group/thread.h \
     91#       util/group/topology.h
     92
    1993
    2094lib_LTLIBRARIES +=
     
    56130#nodist_libSCgroup_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    57131
     132
    58133GROUPTESTS = \
    59134        memtest \
     
    76151        libSCref.la
    77152
    78 memtest_SOURCES = memtest.cc
     153memtest_SOURCES = \
     154        util/group/memtest.cc
    79155memtest_LDADD = \
    80156        libSCgroup.la \
     
    86162        libSCref.la
    87163
    88 messtest_SOURCES = messtest.cc
     164messtest_SOURCES = \
     165        util/group/messtest.cc
    89166messtest_LDADD = \
    90167        libSCgroup.la \
     
    96173        libSCref.la
    97174
    98 pooltest_SOURCES = pooltest.cc
     175pooltest_SOURCES = \
     176        util/group/pooltest.cc
    99177pooltest_LDADD = \
    100178        $(GROUPLIBS)
    101179
    102 prttest_SOURCES = prttest.cc
     180prttest_SOURCES = \
     181        util/group/prttest.cc
    103182prttest_LDADD = \
    104183        $(GROUPLIBS)
    105184
    106 rnglocktest_SOURCES = rnglocktest.cc
     185rnglocktest_SOURCES = \
     186        util/group/rnglocktest.cc
    107187rnglocktest_LDADD = \
    108188        libSCmisc.la libSCgroup.la
    109189
    110 thrtest_SOURCES = thrtest.cc
     190thrtest_SOURCES = \
     191        util/group/thrtest.cc
    111192thrtest_LDADD = \
    112193        libSCgroup.la \
  • ThirdParty/mpqc_open/src/lib/util/keyval/Makefile.am

    r318d5a r23612c  
    11LIBSCKEYVALSOURCES = \
    2                 ipv2_alloc.cc ipv2.cc ipv2_cwk.cc ipv2_data.cc ipv2_error.cc ipv2_karray.cc ipv2_parse.cc ipv2_print.cc ipv2_read.cc ipv2_scan.cc keyvalagg.cc keyvalass.cc keyval.cc keyvalipv2.cc keyvalpre.cc keyvalstr.cc keyvalval.cc
     2        util/keyval/ipv2_alloc.cc \
     3        util/keyval/ipv2.cc \
     4        util/keyval/ipv2_cwk.cc \
     5        util/keyval/ipv2_data.cc \
     6        util/keyval/ipv2_error.cc \
     7        util/keyval/ipv2_karray.cc \
     8        util/keyval/ipv2_parse.cc \
     9        util/keyval/ipv2_print.cc \
     10        util/keyval/ipv2_read.cc \
     11        util/keyval/ipv2_scan.cc \
     12        util/keyval/keyvalagg.cc \
     13        util/keyval/keyvalass.cc \
     14        util/keyval/keyval.cc \
     15        util/keyval/keyvalipv2.cc \
     16        util/keyval/keyvalpre.cc \
     17        util/keyval/keyvalstr.cc \
     18        util/keyval/keyvalval.cc
     19
    320
    421LIBSCKEYVALHEADERS = \
    5                 ipv2.h ipv2_parse.h ipv2_scan.h keyval.h keyvalval.h LIBS.h
     22        util/keyval/ipv2.h \
     23        util/keyval/ipv2_parse.h \
     24        util/keyval/ipv2_scan.h \
     25        util/keyval/keyval.h \
     26        util/keyval/keyvalval.h
     27
    628
    729lib_LTLIBRARIES +=
     
    4365#nodist_libSCkeyval_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4466
     67
    4568KEYVALTESTS = \
    4669        keyvaltest
     
    5881        libSCref.la
    5982
    60 keyvaltest_SOURCES = keyvaltest.cc
     83keyvaltest_SOURCES = \
     84        util/keyval/keyvaltest.cc
     85
    6186keyvaltest_LDADD = \
    6287        $(KEYVALLIBS)
  • ThirdParty/mpqc_open/src/lib/util/misc/Makefile.am

    r318d5a r23612c  
    11LIBSCMISCSOURCES = \
    2                 bug.cc compute.cc exenv.cc formio.cc ieee.cc regtime.cc units.cc
    3 # ccaenv.cc
     2        util/misc/bug.cc \
     3        util/misc/compute.cc \
     4        util/misc/exenv.cc \
     5        util/misc/formio.cc \
     6        util/misc/ieee.cc \
     7        util/misc/regtime.cc \
     8        util/misc/units.cc
     9
     10#       util/misc/ccaenv.cc
     11
    412
    513LIBSCMISCHEADERS = \
    6                 timer.h compute.h ieee.h bug.h exenv.h
    7 #               autovec.h bug.h ccaenv.h comptmpl.h compute.h exenv.h formio.h ieee.h LIBS.h math.h newstring.h regtime.h scint.h string.h timer.h units.h
     14        util/misc/timer.h \
     15        util/misc/compute.h \
     16        util/misc/ieee.h \
     17        util/misc/bug.h \
     18        util/misc/exenv.h
     19
     20#       util/misc/autovec.h \
     21#       util/misc/bug.h \
     22#       util/misc/ccaenv.h \
     23#       util/misc/comptmpl.h \
     24#       util/misc/compute.h \
     25#       util/misc/exenv.h \
     26#       util/misc/formio.h \
     27#       util/misc/ieee.h \
     28#       util/misc/LIBS.h \
     29#       util/misc/math.h \
     30#       util/misc/newstring.h \
     31#       util/misc/regtime.h \
     32#       util/misc/scint.h \
     33#       util/misc/string.h \
     34#       util/misc/timer.h \
     35#       util/misc/units.h
     36
    837
    938lib_LTLIBRARIES +=
     
    4574#nodist_libSCmisc_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4675
     76
    4777MISCTESTS = \
    4878        autovectest \
     
    6090MISCLIBS =
    6191
    62 autovectest_SOURCES = autovectest.cc
     92autovectest_SOURCES = \
     93        util/misc/autovectest.cc
    6394autovectest_LDADD = \
    6495        $(MISCLIBS)
    6596
    66 comptest_SOURCES = comptest.cc
     97comptest_SOURCES = \
     98        util/misc/comptest.cc
    6799comptest_LDADD = \
    68100        $(MISCLIBS)
    69101
    70 tregtime_SOURCES = tregtime.cc
     102tregtime_SOURCES = \
     103        util/misc/tregtime.cc
    71104tregtime_LDADD = \
    72105        $(MISCLIBS)
    73106
    74 scinttest_SOURCES = scinttest.cc
     107scinttest_SOURCES = \
     108        util/misc/scinttest.cc
    75109scinttest_LDADD = \
    76110        $(MISCLIBS)
    77111
    78 bugtest_SOURCES = bugtest.cc
     112bugtest_SOURCES = \
     113        util/misc/bugtest.cc
    79114bugtest_LDADD = \
    80115        $(MISCLIBS)
    81116
    82 scextest_misc_SOURCES = scextest.cc
     117scextest_misc_SOURCES = \
     118        util/misc/scextest.cc
    83119scextest_misc_LDADD = \
    84120        $(MISCLIBS)
    85121
    86 unittest_SOURCES = unittest.cc
     122unittest_SOURCES = \
     123        util/misc/unittest.cc
    87124unittest_LDADD = \
    88125        $(MISCLIBS)
    89126
    90 formiot_SOURCES = formiot.cc
     127formiot_SOURCES = \
     128        util/misc/formiot.cc
    91129formiot_LDADD = \
    92130        $(MISCLIBS)
  • ThirdParty/mpqc_open/src/lib/util/options/Makefile.am

    r318d5a r23612c  
    11LIBSCOPTIONSSOURCES = \
    2                 GetLongOpt.cc
     2        util/options/GetLongOpt.cc
     3
    34
    45LIBSCOPTIONSHEADERS = \
    5                 GetLongOpt.h
     6        util/options/GetLongOpt.h
     7
    68
    79lib_LTLIBRARIES +=
     
    4345#nodist_libSCoptions_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4446
     47
    4548OPTIONSTESTS = \
    4649        sample
     
    5255        libSCoptions.la
    5356
    54 sample_SOURCES = README.cc
     57sample_SOURCES = \
     58        util/options/README.cc
     59
    5560sample_LDADD = \
    5661        $(OPTIONSLIBS)
  • ThirdParty/mpqc_open/src/lib/util/psi3/libpsio/Makefile.am

    r318d5a r23612c  
    11LIBSCLIBPSIOSOURCES = \
    2         init.cc done.cc open.cc close.cc open_check.cc error.cc \
    3         rw.cc read.cc write.cc \
    4         tocwrite.cc tocread.cc tocscan.cc toclast.cc tocdel.cc tocclean.cc tocprint.cc \
    5         get_filename.cc get_numvols.cc get_volpath.cc volseek.cc get_address.cc get_global_address.cc \
    6         write_entry.cc read_entry.cc write_block.cc read_block.cc
    7 #               close.cc done.cc error.cc get_address.cc get_filename.cc get_global_address.cc get_numvols.cc get_volpath.cc init.cc open.cc open_check.cc psiotest.cc read_block.cc read.cc read_entry.cc rw.cc tocclean.cc tocdel.cc toclast.cc tocprint.cc tocread.cc tocscan.cc tocwrite.cc volseek.cc write_block.cc write.cc write_entry.cc
     2        util/psi3/libpsio/init.cc \
     3        util/psi3/libpsio/done.cc \
     4        util/psi3/libpsio/open.cc \
     5        util/psi3/libpsio/close.cc \
     6        util/psi3/libpsio/open_check.cc \
     7        util/psi3/libpsio/error.cc \
     8        util/psi3/libpsio/rw.cc \
     9        util/psi3/libpsio/read.cc \
     10        util/psi3/libpsio/write.cc \
     11        util/psi3/libpsio/tocwrite.cc \
     12        util/psi3/libpsio/tocread.cc \
     13        util/psi3/libpsio/tocscan.cc \
     14        util/psi3/libpsio/toclast.cc \
     15        util/psi3/libpsio/tocdel.cc \
     16        util/psi3/libpsio/tocclean.cc \
     17        util/psi3/libpsio/tocprint.cc \
     18        util/psi3/libpsio/get_filename.cc \
     19        util/psi3/libpsio/get_numvols.cc \
     20        util/psi3/libpsio/get_volpath.cc \
     21        util/psi3/libpsio/volseek.cc \
     22        util/psi3/libpsio/get_address.cc \
     23        util/psi3/libpsio/get_global_address.cc \
     24        util/psi3/libpsio/write_entry.cc \
     25        util/psi3/libpsio/read_entry.cc \
     26        util/psi3/libpsio/write_block.cc \
     27        util/psi3/libpsio/read_block.cc
     28
     29#       util/psi3/libpsio/close.cc \
     30#       util/psi3/libpsio/done.cc \
     31#       util/psi3/libpsio/error.cc \
     32#       util/psi3/libpsio/get_address.cc \
     33#       util/psi3/libpsio/get_filename.cc \
     34#       util/psi3/libpsio/get_global_address.cc \
     35#       util/psi3/libpsio/get_numvols.cc \
     36#       util/psi3/libpsio/get_volpath.cc \
     37#       util/psi3/libpsio/init.cc \
     38#       util/psi3/libpsio/open.cc \
     39#       util/psi3/libpsio/open_check.cc \
     40#       util/psi3/libpsio/psiotest.cc \
     41#       util/psi3/libpsio/read_block.cc \
     42#       util/psi3/libpsio/read.cc \
     43#       util/psi3/libpsio/read_entry.cc \
     44#       util/psi3/libpsio/rw.cc \
     45#       util/psi3/libpsio/tocclean.cc \
     46#       util/psi3/libpsio/tocdel.cc \
     47#       util/psi3/libpsio/toclast.cc \
     48#       util/psi3/libpsio/tocprint.cc \
     49#       util/psi3/libpsio/tocread.cc \
     50#       util/psi3/libpsio/tocscan.cc \
     51#       util/psi3/libpsio/tocwrite.cc \
     52#       util/psi3/libpsio/volseek.cc \
     53#       util/psi3/libpsio/write_block.cc \
     54#       util/psi3/libpsio/write.cc \
     55#       util/psi3/libpsio/write_entry.cc
     56
    857
    958LIBSCLIBPSIOHEADERS = \
    10         psio.h psio.gbl
    11 #               psifiles.h psio.h
     59        util/psi3/libpsio/psio.h \
     60        util/psi3/libpsio/psio.gbl
     61
     62#       util/psi3/libpsio/psifiles.h \
     63#       util/psi3/libpsio/psio.h
     64
    1265
    1366lib_LTLIBRARIES +=
     
    49102#nodist_libSCpsio_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    50103
     104
    51105PSIOTESTS = \
    52106        psiotest
     
    58112        libSCpsio.la libSCclass.la libSCcontainer.la libSCref.la libSCmisc.la libSCstate.la libSCkeyval.la
    59113
    60 psiotest_SOURCES = psiotest.cc
     114psiotest_SOURCES = \
     115        util/psi3/libpsio/psiotest.cc
    61116psiotest_LDADD = \
    62117        $(PSIOLIBS)
  • ThirdParty/mpqc_open/src/lib/util/ref/Makefile.am

    r318d5a r23612c  
    11LIBSCREFSOURCES = \
    2                 identity.cc ref.cc
     2        util/ref/identity.cc \
     3        util/ref/ref.cc
     4
    35
    46LIBSCREFHEADERS = \
    5                 identity.h ref.h
     7        util/ref/identity.h \
     8        util/ref/ref.h
     9
    610
    711lib_LTLIBRARIES +=
     
    4347#nodist_libSCref_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4448
     49
    4550REFTESTS = \
    4651        reftest
     
    5459        libSCcontainer.la libSCref.la libSCmisc.la
    5560
    56 reftest_SOURCES = reftest.cc reftextx.cc reftextx.h
     61reftest_SOURCES = \
     62        util/ref/reftest.cc \
     63        util/ref/reftextx.cc \
     64        util/ref/reftextx.h
     65
    5766reftest_LDADD = \
    5867        $(REFLIBS)
  • ThirdParty/mpqc_open/src/lib/util/render/Makefile.am

    r318d5a r23612c  
    11LIBSCRENDERSOURCES = \
    2                 algebra3.cc animate.cc appearance.cc color.cc material.cc object.cc oogl.cc polygons.cc polylines.cc polysphere.cc render.cc sphere.cc tempinst.cc transform.cc
     2        util/render/algebra3.cc \
     3        util/render/animate.cc \
     4        util/render/appearance.cc \
     5        util/render/color.cc \
     6        util/render/material.cc \
     7        util/render/object.cc \
     8        util/render/oogl.cc \
     9        util/render/polygons.cc \
     10        util/render/polylines.cc \
     11        util/render/polysphere.cc \
     12        util/render/render.cc \
     13        util/render/sphere.cc \
     14        util/render/tempinst.cc \
     15        util/render/transform.cc
     16
    317
    418LIBSCRENDERHEADERS = \
    5                 algebra3.h animate.h appearance.h color.h find.h linkage.h material.h object.h oogl.h parameter.h polygons.h polylines.h polysphere.h render.h sphere.h stack.h transform.h
     19        util/render/algebra3.h \
     20        util/render/animate.h \
     21        util/render/appearance.h \
     22        util/render/color.h \
     23        util/render/find.h \
     24        util/render/linkage.h \
     25        util/render/material.h \
     26        util/render/object.h \
     27        util/render/oogl.h \
     28        util/render/parameter.h \
     29        util/render/polygons.h \
     30        util/render/polylines.h \
     31        util/render/polysphere.h \
     32        util/render/render.h \
     33        util/render/sphere.h \
     34        util/render/stack.h \
     35        util/render/transform.h
     36
    637
    738lib_LTLIBRARIES +=
     
    4374#nodist_libSCrender_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4475
     76
    4577RENDERTESTS = \
    4678        rentest
     
    5486        libSCcontainer.la libSCref.la libSCmisc.la
    5587
    56 rentest_SOURCES = rentest.cc
     88rentest_SOURCES = \
     89        util/render/rentest.cc
    5790rentest_LDADD = \
    5891        $(RENDERLIBS)
  • ThirdParty/mpqc_open/src/lib/util/state/Makefile.am

    r318d5a r23612c  
    11LIBSCSTATESOURCES = \
    2                 proxy.cc state_bin.cc state.cc state_file.cc statein.cc stateout.cc state_text.cc tmplinst.cc translate.cc
     2        util/state/proxy.cc \
     3        util/state/state_bin.cc \
     4        util/state/state.cc \
     5        util/state/state_file.cc \
     6        util/state/statein.cc \
     7        util/state/stateout.cc \
     8        util/state/state_text.cc \
     9        util/state/tmplinst.cc \
     10        util/state/translate.cc
     11
    312
    413LIBSCSTATEHEADERS = \
    5                 linkage.h proxy.h state_bin.h state_file.h state.h statein.h stateio.h stateout.h state_text.h translate.h
     14        util/state/linkage.h \
     15        util/state/proxy.h \
     16        util/state/state_bin.h \
     17        util/state/state_file.h \
     18        util/state/state.h \
     19        util/state/statein.h \
     20        util/state/stateio.h \
     21        util/state/stateout.h \
     22        util/state/state_text.h \
     23        util/state/translate.h
     24
    625
    726lib_LTLIBRARIES +=
     
    4362#nodist_libSCstate_libinclude_HEADERS = $(top_builddir)/src/lib/scconfig.h
    4463
     64
    4565STATETESTS = \
    4666        statetest
     
    5474        libSCcontainer.la libSCref.la libSCmisc.la
    5575
    56 statetest_SOURCES = statetest.cc
     76statetest_SOURCES = \
     77        util/state/statetest.cc
     78
    5779statetest_LDADD = \
    5880        $(STATELIBS)
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