Changeset 0454de for src/Actions


Ignore:
Timestamp:
Jul 22, 2010, 8:50:59 PM (15 years ago)
Author:
Frederik Heber <heber@…>
Branches:
Action_Thermostats, Add_AtomRandomPerturbation, Add_FitFragmentPartialChargesAction, Add_RotateAroundBondAction, Add_SelectAtomByNameAction, Added_ParseSaveFragmentResults, AddingActions_SaveParseParticleParameters, Adding_Graph_to_ChangeBondActions, Adding_MD_integration_tests, Adding_ParticleName_to_Atom, Adding_StructOpt_integration_tests, AtomFragments, Automaking_mpqc_open, AutomationFragmentation_failures, Candidate_v1.5.4, Candidate_v1.6.0, Candidate_v1.6.1, ChangeBugEmailaddress, ChangingTestPorts, ChemicalSpaceEvaluator, CombiningParticlePotentialParsing, Combining_Subpackages, Debian_Package_split, Debian_package_split_molecuildergui_only, Disabling_MemDebug, Docu_Python_wait, EmpiricalPotential_contain_HomologyGraph, EmpiricalPotential_contain_HomologyGraph_documentation, Enable_parallel_make_install, Enhance_userguide, Enhanced_StructuralOptimization, Enhanced_StructuralOptimization_continued, Example_ManyWaysToTranslateAtom, Exclude_Hydrogens_annealWithBondGraph, FitPartialCharges_GlobalError, Fix_BoundInBox_CenterInBox_MoleculeActions, Fix_ChargeSampling_PBC, Fix_ChronosMutex, Fix_FitPartialCharges, Fix_FitPotential_needs_atomicnumbers, Fix_ForceAnnealing, Fix_IndependentFragmentGrids, Fix_ParseParticles, Fix_ParseParticles_split_forward_backward_Actions, Fix_PopActions, Fix_QtFragmentList_sorted_selection, Fix_Restrictedkeyset_FragmentMolecule, Fix_StatusMsg, Fix_StepWorldTime_single_argument, Fix_Verbose_Codepatterns, Fix_fitting_potentials, Fixes, ForceAnnealing_goodresults, ForceAnnealing_oldresults, ForceAnnealing_tocheck, ForceAnnealing_with_BondGraph, ForceAnnealing_with_BondGraph_continued, ForceAnnealing_with_BondGraph_continued_betteresults, ForceAnnealing_with_BondGraph_contraction-expansion, FragmentAction_writes_AtomFragments, FragmentMolecule_checks_bonddegrees, GeometryObjects, Gui_Fixes, Gui_displays_atomic_force_velocity, ImplicitCharges, IndependentFragmentGrids, IndependentFragmentGrids_IndividualZeroInstances, IndependentFragmentGrids_IntegrationTest, IndependentFragmentGrids_Sole_NN_Calculation, JobMarket_RobustOnKillsSegFaults, JobMarket_StableWorkerPool, JobMarket_unresolvable_hostname_fix, MoreRobust_FragmentAutomation, ODR_violation_mpqc_open, PartialCharges_OrthogonalSummation, PdbParser_setsAtomName, PythonUI_with_named_parameters, QtGui_reactivate_TimeChanged_changes, Recreated_GuiChecks, Rewrite_FitPartialCharges, RotateToPrincipalAxisSystem_UndoRedo, SaturateAtoms_findBestMatching, SaturateAtoms_singleDegree, StoppableMakroAction, Subpackage_CodePatterns, Subpackage_JobMarket, Subpackage_LinearAlgebra, Subpackage_levmar, Subpackage_mpqc_open, Subpackage_vmg, Switchable_LogView, ThirdParty_MPQC_rebuilt_buildsystem, TrajectoryDependenant_MaxOrder, TremoloParser_IncreasedPrecision, TremoloParser_MultipleTimesteps, TremoloParser_setsAtomName, Ubuntu_1604_changes, stable
Children:
ce8755
Parents:
bcd16a
Message:

converted LoadXyzAction to new createDialog().

Location:
src/Actions/ParserAction
Files:
2 edited

Legend:

Unmodified
Added
Removed
  • src/Actions/ParserAction/LoadXyzAction.cpp

    rbcd16a r0454de  
    2121#include "UIElements/UIFactory.hpp"
    2222#include "UIElements/Dialog.hpp"
    23 #include "Actions/MapOfActions.hpp"
     23#include "UIElements/ValueStorage.hpp"
    2424
    2525#include "atom.hpp"
     
    5252{}
    5353
     54Dialog* ParserLoadXyzAction::createDialog() {
     55  Dialog *dialog = UIFactory::getInstance().makeDialog();
     56
     57  dialog->queryString(NAME, ValueStorage::getInstance().getDescription(NAME));
     58
     59  return dialog;
     60}
     61
    5462Action::state_ptr ParserLoadXyzAction::performCall() {
    5563  string filename;
    56   Dialog *dialog = UIFactory::getInstance().makeDialog();
    5764
    58   dialog->queryString(NAME,&filename, NAME);
     65  ValueStorage::getInstance().queryCurrentValue(NAME, filename);
    5966
    60   if(dialog->display()) {
    61     DoLog(1) && (Log() << Verbose(1) << "Parsing xyz file for new atoms." << endl);
    62     // parse xyz file
    63     ifstream input;
    64     input.open(filename.c_str());
    65     if (!input.fail()) {
    66       // TODO: Remove the insertion into molecule when saving does not depend on them anymore. Also, remove molecule.hpp include
    67       set <atom*> UniqueList;
    68       {
    69         vector<atom *> ListBefore = World::getInstance().getAllAtoms();
    70         for (vector<atom *>::iterator runner = ListBefore.begin();runner != ListBefore.end(); ++runner)
    71           UniqueList.insert(*runner);
     67  DoLog(1) && (Log() << Verbose(1) << "Parsing xyz file for new atoms." << endl);
     68  // parse xyz file
     69  ifstream input;
     70  input.open(filename.c_str());
     71  if (!input.fail()) {
     72    // TODO: Remove the insertion into molecule when saving does not depend on them anymore. Also, remove molecule.hpp include
     73    set <atom*> UniqueList;
     74    {
     75      vector<atom *> ListBefore = World::getInstance().getAllAtoms();
     76      for (vector<atom *>::iterator runner = ListBefore.begin();runner != ListBefore.end(); ++runner)
     77        UniqueList.insert(*runner);
     78    }
     79    XyzParser parser; // briefly instantiate a parser which is removed at end of focus
     80    parser.load(&input);
     81    {
     82      vector<atom *> ListAfter = World::getInstance().getAllAtoms();
     83      pair< set<atom *>::iterator, bool > Inserter;
     84      if (UniqueList.size() != ListAfter.size()) { // only create if new atoms have been parsed
     85        MoleculeListClass *molecules = World::getInstance().getMolecules();
     86        molecule *mol = World::getInstance().createMolecule();
     87        molecules->insert(mol);
     88        for (vector<atom *>::iterator runner = ListAfter.begin(); runner != ListAfter.end(); ++runner) {
     89          Inserter = UniqueList.insert(*runner);
     90          if (Inserter.second) { // if not present, then new (just parsed) atom, add ...
     91            cout << "Adding new atom " << **runner << " to new mol." << endl;
     92            mol->AddAtom(*runner);
     93          }
     94        }
     95        mol->doCountAtoms();
     96      } else {
     97        cout << "No atoms parsed?" << endl;
    7298      }
    73       XyzParser parser; // briefly instantiate a parser which is removed at end of focus
    74       parser.load(&input);
    75       {
    76         vector<atom *> ListAfter = World::getInstance().getAllAtoms();
    77         pair< set<atom *>::iterator, bool > Inserter;
    78         if (UniqueList.size() != ListAfter.size()) { // only create if new atoms have been parsed
    79           MoleculeListClass *molecules = World::getInstance().getMolecules();
    80           molecule *mol = World::getInstance().createMolecule();
    81           molecules->insert(mol);
    82           for (vector<atom *>::iterator runner = ListAfter.begin(); runner != ListAfter.end(); ++runner) {
    83             Inserter = UniqueList.insert(*runner);
    84             if (Inserter.second) { // if not present, then new (just parsed) atom, add ...
    85               cout << "Adding new atom " << **runner << " to new mol." << endl;
    86               mol->AddAtom(*runner);
    87             }
    88           }
    89           mol->doCountAtoms();
    90         } else {
    91           cout << "No atoms parsed?" << endl;
    92         }
    93       }
    94     } else {
    95       DoeLog(1) && (eLog() << Verbose(1) << "Could not open file " << filename << "." << endl);
    9699    }
    97     input.close();
     100  } else {
     101    DoeLog(1) && (eLog() << Verbose(1) << "Could not open file " << filename << "." << endl);
    98102  }
    99   delete dialog;
    100   return Action::failure;
     103  input.close();
     104  return Action::success;
    101105}
    102106
  • src/Actions/ParserAction/LoadXyzAction.hpp

    rbcd16a r0454de  
    2222  virtual const std::string getName();
    2323private:
     24  virtual Dialog * createDialog();
    2425  virtual Action::state_ptr performCall();
    2526  virtual Action::state_ptr performUndo(Action::state_ptr);
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