Action_Thermostats
Add_AtomRandomPerturbation
Add_FitFragmentPartialChargesAction
Add_RotateAroundBondAction
Add_SelectAtomByNameAction
Added_ParseSaveFragmentResults
AddingActions_SaveParseParticleParameters
Adding_Graph_to_ChangeBondActions
Adding_MD_integration_tests
Adding_ParticleName_to_Atom
Adding_StructOpt_integration_tests
AtomFragments
Automaking_mpqc_open
AutomationFragmentation_failures
Candidate_v1.5.4
Candidate_v1.6.0
Candidate_v1.6.1
Candidate_v1.7.0
Candidate_v1.7.1
ChangeBugEmailaddress
ChangingTestPorts
ChemicalSpaceEvaluator
CombiningParticlePotentialParsing
Combining_Subpackages
Debian_Package_split
Debian_package_split_molecuildergui_only
Disabling_MemDebug
Docu_Python_wait
EmpiricalPotential_contain_HomologyGraph
EmpiricalPotential_contain_HomologyGraph_documentation
Enable_parallel_make_install
Enhance_userguide
Enhanced_StructuralOptimization
Enhanced_StructuralOptimization_continued
Example_ManyWaysToTranslateAtom
Exclude_Hydrogens_annealWithBondGraph
FitPartialCharges_GlobalError
Fix_BoundInBox_CenterInBox_MoleculeActions
Fix_ChargeSampling_PBC
Fix_ChronosMutex
Fix_FitPartialCharges
Fix_FitPotential_needs_atomicnumbers
Fix_ForceAnnealing
Fix_IndependentFragmentGrids
Fix_ParseParticles
Fix_ParseParticles_split_forward_backward_Actions
Fix_PopActions
Fix_QtFragmentList_sorted_selection
Fix_Restrictedkeyset_FragmentMolecule
Fix_StatusMsg
Fix_StepWorldTime_single_argument
Fix_Verbose_Codepatterns
Fix_fitting_potentials
Fixes
ForceAnnealing_goodresults
ForceAnnealing_oldresults
ForceAnnealing_tocheck
ForceAnnealing_with_BondGraph
ForceAnnealing_with_BondGraph_continued
ForceAnnealing_with_BondGraph_continued_betteresults
ForceAnnealing_with_BondGraph_contraction-expansion
FragmentAction_writes_AtomFragments
FragmentMolecule_checks_bonddegrees
GeometryObjects
Gui_Fixes
Gui_displays_atomic_force_velocity
ImplicitCharges
IndependentFragmentGrids
IndependentFragmentGrids_IndividualZeroInstances
IndependentFragmentGrids_IntegrationTest
IndependentFragmentGrids_Sole_NN_Calculation
JobMarket_RobustOnKillsSegFaults
JobMarket_StableWorkerPool
JobMarket_unresolvable_hostname_fix
MoreRobust_FragmentAutomation
ODR_violation_mpqc_open
PartialCharges_OrthogonalSummation
PdbParser_setsAtomName
PythonUI_with_named_parameters
QtGui_reactivate_TimeChanged_changes
Recreated_GuiChecks
Rewrite_FitPartialCharges
RotateToPrincipalAxisSystem_UndoRedo
SaturateAtoms_findBestMatching
SaturateAtoms_singleDegree
StoppableMakroAction
Subpackage_CodePatterns
Subpackage_JobMarket
Subpackage_LinearAlgebra
Subpackage_levmar
Subpackage_mpqc_open
Subpackage_vmg
Switchable_LogView
ThirdParty_MPQC_rebuilt_buildsystem
TrajectoryDependenant_MaxOrder
TremoloParser_IncreasedPrecision
TremoloParser_MultipleTimesteps
TremoloParser_setsAtomName
Ubuntu_1604_changes
stable
|
Last change
on this file since 30c753 was 30c753, checked in by Frederik Heber <heber@…>, 14 years ago |
|
Removed atomSet atoms in class molecule and replaced by a boost::transform_iterator.
- atoms causes us a O(N2) complexity due to having to remove atoms from this
linearized vector (in O(N) not O(log N) as for the atomIds.
- marked Molecules/BondFile and Tesselation/BigNonConvex as XFAIL due to
interchanged ids.
- thanks to Jan Hamaekers for pointing this out.
- NOTE: so far we have not specialized molecule::const_iterator, it simply
points to molecule::iterator.
|
-
Property mode
set to
100644
|
|
File size:
753 bytes
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| Line | |
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| 1 | ### Big Non convex tesselation
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| 2 |
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| 3 | AT_SETUP([Tesselation - Big non-Convex Envelope])
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| 4 | AT_KEYWORDS([Tesselation nonconvex nonconvex-envelope])
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| 5 | AT_XFAIL_IF([/bin/true])
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| 6 |
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| 7 | file=test.conf
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| 8 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Tesselation/BigNonConvex/pre/test.conf $file], 0)
|
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| 9 | nonconvexfile=NonConvexEnvelope
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| 10 | AT_CHECK([../../molecuilder -i $file --select-molecule-by-id 0 -N 4. --nonconvex-file $nonconvexfile], 0, [stdout], [stderr])
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| 11 | AT_CHECK([diff ${nonconvexfile}.dat ${abs_top_srcdir}/tests/regression/Tesselation/BigNonConvex/post/NonConvexEnvelope.dat], 0, [ignore], [ignore])
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| 12 | #AT_CHECK([diff ${nonconvexfile}.r3d ${abs_top_srcdir}/tests/regression/Tesselation/BigNonConvex/post/NonConvexEnvelope.r3d], 0, [ignore], [ignore])
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| 13 |
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| 14 | AT_CLEANUP
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|---|
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