source: tests/regression/Selection/Atoms/AtomByRandom/testsuite-selection-select-atom-by-random.at@ 5aa337

Candidate_v1.7.0 stable
Last change on this file since 5aa337 was 0ad4781, checked in by Frederik Heber <frederik.heber@…>, 5 years ago

Added action to randomly select a set of atoms.

  • needed to make new action friend of RandomNumberDistributionFactory to allow setting of distribution parameters.
  • DOCU: added new selection action to userguide.
  • TESTS: added regression test cases, not working yet.
  • Property mode set to 100644
File size: 2.0 KB
Line 
1#
2# MoleCuilder - creates and alters molecular systems
3# Copyright (C) 2020 Frederik Heber
4#
5# This program is free software: you can redistribute it and/or modify
6# it under the terms of the GNU General Public License as published by
7# the Free Software Foundation, either version 3 of the License, or
8# (at your option) any later version.
9#
10# This program is distributed in the hope that it will be useful,
11# but WITHOUT ANY WARRANTY; without even the implied warranty of
12# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
13# GNU General Public License for more details.
14#
15# You should have received a copy of the GNU General Public License
16# along with this program. If not, see <http://www.gnu.org/licenses/>.
17#
18### 7. select atom by random
19
20AT_SETUP([Selection - select atoms randomly])
21AT_KEYWORDS([selection random atom select-atom-by-random])
22# go through all possible counts (1-8) and removed
23i=1
24while test $i -lt 8; do
25 file=count${i}_missing.xyz
26 AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByRandom/pre/test.xyz $file])
27 AT_CHECK([chmod u+w $file], 0)
28 AT_CHECK([../../molecuilder -i $file -v 3 --select-atom-by-random 1 -r], [], [ignore], [ignore])
29 AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByRandom/post/id${i}_missing.xyz])
30 ((i+=1))
31done
32AT_CLEANUP
33
34AT_SETUP([Selection - select atoms randomly fails when atoms absent])
35AT_KEYWORDS([selection random atom select-atom-by-random])
36
37AT_CHECK([../../molecuilder -i empty.xyz -v 3 --select-atom-by-random 1], [1], [ignore], [ignore])
38
39AT_CLEANUP
40
41AT_SETUP([Selection - select all atoms randomly])
42AT_KEYWORDS([selection random atom select-atom-by-random])
43
44AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByRandom/pre/test.xyz $file])
45AT_CHECK([chmod u+w $file], 0)
46AT_CHECK([../../molecuilder -i $file -v 3 --select-atom-by-random 8 -r], [], [ignore], [ignore])
47
48AT_CLEANUP
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