source: tests/regression/Selection/Atoms/AtomByOrder/testsuite-selection-unselect-atom-by-order.at@ 2ba2ed

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since 2ba2ed was 0d97b4, checked in by Frederik Heber <heber@…>, 12 years ago

FIX: Disclaimer appeared twice in each testsuite. Second time removed.

  • Property mode set to 100644
File size: 4.5 KB
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1#
2# MoleCuilder - creates and alters molecular systems
3# Copyright (C) 2008-2012 University of Bonn
4#
5# This program is free software: you can redistribute it and/or modify
6# it under the terms of the GNU General Public License as published by
7# the Free Software Foundation, either version 3 of the License, or
8# (at your option) any later version.
9#
10# This program is distributed in the hope that it will be useful,
11# but WITHOUT ANY WARRANTY; without even the implied warranty of
12# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
13# GNU General Public License for more details.
14#
15# You should have received a copy of the GNU General Public License
16# along with this program. If not, see <http://www.gnu.org/licenses/>.
17#
18### 6. (un)select atom by order
19
20
21AT_SETUP([Unselection - atom with specific order])
22AT_KEYWORDS([unselection order atom unselect-atom-by-order])
23# go through all possible orders (0-7) and remove others
24i=1
25while test $i -le 8; do
26 let id=$i-1
27 file=order${id}_present.xyz
28 # normal
29 AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/pre/test.xyz $file])
30 AT_CHECK([chmod u+w $file], 0)
31 AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-order ${i} -r], [], [ignore], [ignore])
32 AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/post/id${id}_present.xyz])
33 ((i+=1))
34done
35# go reverse through all possible orders (0-7) and remove others
36i=1
37while test $i -le 8; do
38 let id=8-$i
39 file=order${id}_present.xyz
40 # normal
41 AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/pre/test.xyz $file])
42 AT_CHECK([chmod u+w $file], 0)
43 AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-order -${i} -r], [], [ignore], [ignore])
44 AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/post/id${id}_present.xyz])
45 ((i+=1))
46done
47AT_CLEANUP
48
49
50AT_SETUP([Unselection - atom with specific order with Undo])
51AT_KEYWORDS([unselection order atom unselect-atom-by-order undo])
52# go through all possible orders (0-7) and remove others
53i=1
54while test $i -le 8; do
55 let id=$i-1
56 file=order${id}_present.xyz
57 # undo
58 AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/pre/test.xyz $file])
59 AT_CHECK([chmod u+w $file], 0)
60 AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-order ${i} --undo -r], [], [ignore], [ignore])
61 AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/post/empty.xyz])
62 ((i+=1))
63done
64# go reverse through all possible orders (0-7) and remove others
65i=1
66while test $i -le 8; do
67 let id=8-$i
68 file=order${id}_present.xyz
69 # undo
70 AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/pre/test.xyz $file])
71 AT_CHECK([chmod u+w $file], 0)
72 AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-order -${i} --undo -r], [], [ignore], [ignore])
73 AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/post/empty.xyz])
74 ((i+=1))
75done
76AT_CLEANUP
77
78
79AT_SETUP([Unselection - atom with specific order with Redo])
80AT_KEYWORDS([unselection order atom unselect-atom-by-order redo])
81# go through all possible orders (0-7) and remove others
82i=1
83while test $i -le 8; do
84 let id=$i-1
85 file=order${id}_present.xyz
86 # redo
87 AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/pre/test.xyz $file])
88 AT_CHECK([chmod u+w $file], 0)
89 AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-order ${i} --undo --redo -r], [], [ignore], [ignore])
90 AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/post/id${id}_present.xyz])
91 ((i+=1))
92done
93# go reverse through all possible orders (0-7) and remove others
94i=1
95while test $i -le 8; do
96 let id=8-$i
97 file=order${id}_present.xyz
98 # redo
99 AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/pre/test.xyz $file])
100 AT_CHECK([chmod u+w $file], 0)
101 AT_CHECK([../../molecuilder -i $file -v 3 --select-all-atoms --unselect-atom-by-order -${i} --undo --redo -r], [], [ignore], [ignore])
102 AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByOrder/post/id${id}_present.xyz])
103 ((i+=1))
104done
105AT_CLEANUP
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