| 1 | ### 5. (un)select atoms by element | 
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| 2 |  | 
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| 3 | # select element by atomic number: 1, 4 | 
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| 4 | AT_SETUP([Selection - All atoms with specific element by atomic number]) | 
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| 5 | AT_KEYWORDS([selection atom element select-atom-by-element]) | 
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| 6 |  | 
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| 7 | file=test-H_missing.xyz | 
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| 8 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0) | 
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| 9 | AT_CHECK([chmod u+w $file], 0) | 
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| 10 | AT_CHECK([../../molecuilder -i $file -v 3 --select-atom-by-element 1 -r], 0, [stdout], [stderr]) | 
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| 11 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/test-H_missing.xyz], 0, [ignore], [ignore]) | 
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| 12 |  | 
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| 13 | file=test-Be_missing.xyz | 
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| 14 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0) | 
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| 15 | AT_CHECK([chmod u+w $file], 0) | 
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| 16 | AT_CHECK([../../molecuilder -i $file -v 3 --select-atom-by-element 4 -r], 0, [stdout], [stderr]) | 
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| 17 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/test-Be_missing.xyz], 0, [ignore], [ignore]) | 
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| 18 |  | 
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| 19 | AT_CLEANUP | 
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| 20 |  | 
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| 21 |  | 
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| 22 | AT_SETUP([Selection - All atoms with specific element by symbol with Undo]) | 
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| 23 | AT_KEYWORDS([selection atom element select-atom-by-element undo]) | 
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| 24 |  | 
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| 25 | file=test.xyz | 
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| 26 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0) | 
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| 27 | AT_CHECK([chmod u+w $file], 0) | 
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| 28 | AT_CHECK([../../molecuilder -i $file -v 3 --select-atom-by-element 1 --undo -r], 0, [stdout], [stderr]) | 
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| 29 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/test.xyz], 0, [ignore], [ignore]) | 
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| 30 |  | 
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| 31 | file=test.xyz | 
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| 32 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0) | 
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| 33 | AT_CHECK([chmod u+w $file], 0) | 
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| 34 | AT_CHECK([../../molecuilder -i $file -v 3 --select-atom-by-element 4 --undo -r], 0, [stdout], [stderr]) | 
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| 35 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/test.xyz], 0, [ignore], [ignore]) | 
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| 36 |  | 
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| 37 | AT_CLEANUP | 
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| 38 |  | 
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| 39 | AT_SETUP([Selection - All atoms with specific element by symbol with Redo]) | 
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| 40 | AT_KEYWORDS([selection atom element select-atom-by-element redo]) | 
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| 41 |  | 
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| 42 | file=test-H_missing.xyz | 
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| 43 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0) | 
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| 44 | AT_CHECK([chmod u+w $file], 0) | 
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| 45 | AT_CHECK([../../molecuilder -i $file -v 3 --select-atom-by-element 1 --undo --redo -r], 0, [stdout], [stderr]) | 
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| 46 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/test-H_missing.xyz], 0, [ignore], [ignore]) | 
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| 47 |  | 
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| 48 | file=test-Be_missing.xyz | 
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| 49 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/pre/test.xyz $file], 0) | 
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| 50 | AT_CHECK([chmod u+w $file], 0) | 
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| 51 | AT_CHECK([../../molecuilder -i $file -v 3 --select-atom-by-element 4 --undo --redo -r], 0, [stdout], [stderr]) | 
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| 52 | AT_CHECK([diff -I '.*Created by molecuilder.*' $file ${abs_top_srcdir}/tests/regression/Selection/Atoms/AtomByElement/post/test-Be_missing.xyz], 0, [ignore], [ignore]) | 
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| 53 |  | 
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| 54 | AT_CLEANUP | 
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