Action_Thermostats
        Add_AtomRandomPerturbation
        Add_FitFragmentPartialChargesAction
        Add_RotateAroundBondAction
        Add_SelectAtomByNameAction
        Adding_Graph_to_ChangeBondActions
        Adding_MD_integration_tests
        Adding_StructOpt_integration_tests
        Automaking_mpqc_open
        AutomationFragmentation_failures
        Candidate_v1.5.4
        Candidate_v1.6.0
        Candidate_v1.6.1
        Candidate_v1.7.0
        ChangeBugEmailaddress
        ChangingTestPorts
        ChemicalSpaceEvaluator
        Combining_Subpackages
        Debian_Package_split
        Debian_package_split_molecuildergui_only
        Disabling_MemDebug
        Docu_Python_wait
        EmpiricalPotential_contain_HomologyGraph
        EmpiricalPotential_contain_HomologyGraph_documentation
        Enable_parallel_make_install
        Enhance_userguide
        Enhanced_StructuralOptimization
        Enhanced_StructuralOptimization_continued
        Example_ManyWaysToTranslateAtom
        Exclude_Hydrogens_annealWithBondGraph
        FitPartialCharges_GlobalError
        Fix_ChargeSampling_PBC
        Fix_ChronosMutex
        Fix_FitPartialCharges
        Fix_FitPotential_needs_atomicnumbers
        Fix_ForceAnnealing
        Fix_IndependentFragmentGrids
        Fix_ParseParticles
        Fix_ParseParticles_split_forward_backward_Actions
        Fix_StatusMsg
        Fix_StepWorldTime_single_argument
        Fix_Verbose_Codepatterns
        ForceAnnealing_goodresults
        ForceAnnealing_oldresults
        ForceAnnealing_tocheck
        ForceAnnealing_with_BondGraph
        ForceAnnealing_with_BondGraph_continued
        ForceAnnealing_with_BondGraph_continued_betteresults
        ForceAnnealing_with_BondGraph_contraction-expansion
        GeometryObjects
        Gui_displays_atomic_force_velocity
        IndependentFragmentGrids
        IndependentFragmentGrids_IndividualZeroInstances
        IndependentFragmentGrids_IntegrationTest
        IndependentFragmentGrids_Sole_NN_Calculation
        JobMarket_RobustOnKillsSegFaults
        JobMarket_StableWorkerPool
        JobMarket_unresolvable_hostname_fix
        ODR_violation_mpqc_open
        PartialCharges_OrthogonalSummation
        PythonUI_with_named_parameters
        QtGui_reactivate_TimeChanged_changes
        Recreated_GuiChecks
        RotateToPrincipalAxisSystem_UndoRedo
        SaturateAtoms_findBestMatching
        StoppableMakroAction
        Subpackage_CodePatterns
        Subpackage_JobMarket
        Subpackage_LinearAlgebra
        Subpackage_levmar
        Subpackage_mpqc_open
        Subpackage_vmg
        ThirdParty_MPQC_rebuilt_buildsystem
        TrajectoryDependenant_MaxOrder
        TremoloParser_IncreasedPrecision
        TremoloParser_MultipleTimesteps
        Ubuntu_1604_changes
        stable
      
      
        
          | 
            Last change
 on this file since 7e81ca was             e3c4c5, checked in by Frederik Heber <heber@…>, 10 years ago           | 
        
        
          | 
             
MpqcParser additionally allows to save optimization jobs. 
 
- this is enabled via a new flag "jobtype" that can be either Default or
Optimization.
 - also storing "checkpoint = no" per default for all mpqc input files. This is
a safety measures such that no old checkpoint files are used that reside in
the same folder accidentally. This is especially important for fragment
files.
 - TESTFIX: changed all regression tests comparing against .in files, added
new checkpoint statement.
 - TESTFIX: changed unit test ParserMpqcUnitTest in the same manner.
  
           | 
        
        
          
            
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           | 
        
        
          | 
            File size:
            539 bytes
           | 
        
      
      
| Line |   | 
|---|
| 1 | % Created by MoleCuilder
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| 2 | mpqc: (
 | 
|---|
| 3 |         checkpoint = no
 | 
|---|
| 4 |         savestate = no
 | 
|---|
| 5 |         do_gradient = yes
 | 
|---|
| 6 |         mole<MBPT2>: (
 | 
|---|
| 7 |                 basis = $:basis
 | 
|---|
| 8 |                 molecule = $:molecule
 | 
|---|
| 9 |                 memory = 16000000
 | 
|---|
| 10 |                 reference<CLHF>: (
 | 
|---|
| 11 |                         maxiter = 1000
 | 
|---|
| 12 |                         basis = $:basis
 | 
|---|
| 13 |                         molecule = $:molecule
 | 
|---|
| 14 |                         memory = 16000000
 | 
|---|
| 15 |                 )
 | 
|---|
| 16 |         )
 | 
|---|
| 17 | )
 | 
|---|
| 18 | molecule<Molecule>: (
 | 
|---|
| 19 |         unit = angstrom
 | 
|---|
| 20 |         { atoms geometry } = {
 | 
|---|
| 21 |                 O [ -0.506      0       0 ]
 | 
|---|
| 22 |                 H [ 0.253       0       0.504 ]
 | 
|---|
| 23 |                 H [ 0.253       0       -0.504 ]
 | 
|---|
| 24 |                 O [ 1.494       0       0 ]
 | 
|---|
| 25 |                 H [ 2.253       0       0.504 ]
 | 
|---|
| 26 |                 H [ 2.253       0       -0.504 ]
 | 
|---|
| 27 |         }
 | 
|---|
| 28 | )
 | 
|---|
| 29 | basis<GaussianBasisSet>: (
 | 
|---|
| 30 |         name = "3-21G"
 | 
|---|
| 31 |         molecule = $:molecule
 | 
|---|
| 32 | )
 | 
|---|
       
      
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