1 | #
|
---|
2 | # MoleCuilder - creates and alters molecular systems
|
---|
3 | # Copyright (C) 2008-2012 University of Bonn
|
---|
4 | #
|
---|
5 | # This program is free software: you can redistribute it and/or modify
|
---|
6 | # it under the terms of the GNU General Public License as published by
|
---|
7 | # the Free Software Foundation, either version 3 of the License, or
|
---|
8 | # (at your option) any later version.
|
---|
9 | #
|
---|
10 | # This program is distributed in the hope that it will be useful,
|
---|
11 | # but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
12 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
13 | # GNU General Public License for more details.
|
---|
14 | #
|
---|
15 | # You should have received a copy of the GNU General Public License
|
---|
16 | # along with this program. If not, see <http://www.gnu.org/licenses/>.
|
---|
17 | #
|
---|
18 | AT_BANNER([MoleCuilder - Molecules])
|
---|
19 |
|
---|
20 | # Save selected
|
---|
21 | m4_include([Molecules/SaveSelectedMolecules/testsuite-molecules-save-selected-molecules.at])
|
---|
22 |
|
---|
23 | # Bonds from tremolo dbond file
|
---|
24 | m4_include([Molecules/BondFile/testsuite-molecules-tremolo-dbond-file.at])
|
---|
25 |
|
---|
26 | # Bonds from fragmentation bond file
|
---|
27 | m4_include([Molecules/BondFile/testsuite-molecules-fragmentation-bond-file.at])
|
---|
28 |
|
---|
29 | # change bond angle
|
---|
30 | m4_include([Molecules/ChangeBondAngle/testsuite-molecules-change-bond-angle.at])
|
---|
31 |
|
---|
32 | # copy molecule
|
---|
33 | m4_include([Molecules/Copy/testsuite-molecules-copy-molecule.at])
|
---|
34 |
|
---|
35 | # Storing adjacency info
|
---|
36 | m4_include([Molecules/SaveAdjacency/testsuite-molecules-save-adjacency.at])
|
---|
37 |
|
---|
38 | # Storing bond info
|
---|
39 | m4_include([Molecules/SaveBonds/testsuite-molecules-save-bonds.at])
|
---|
40 |
|
---|
41 | # Storing temperature
|
---|
42 | m4_include([Molecules/SaveTemperature/testsuite-molecules-save-temperature.at])
|
---|
43 |
|
---|
44 | # linear interpolation
|
---|
45 | m4_include([Molecules/LinearInterpolationofTrajectories/testsuite-molecules-linear-interpolation-of-trajectories.at])
|
---|
46 |
|
---|
47 | # Verlet force integration
|
---|
48 | m4_include([Molecules/VerletIntegration/testsuite-molecules-verlet-integration.at])
|
---|
49 |
|
---|
50 | # Translation
|
---|
51 | m4_include([Molecules/Translation/testsuite-molecules-translation.at])
|
---|
52 |
|
---|
53 | # Translation - Periodic
|
---|
54 | m4_include([Molecules/Translation-Periodic/testsuite-molecules-translation-periodic.at])
|
---|
55 |
|
---|
56 | # remove whole molecules
|
---|
57 | m4_include([Molecules/Remove/testsuite-molecules-remove.at])
|
---|
58 |
|
---|
59 | # Rotate to Principal Axis System
|
---|
60 | m4_include([Molecules/RotateToPrincipalAxisSystem/testsuite-molecules-rotate-to-principal-axis-system.at])
|
---|
61 |
|
---|
62 | # rotate around one of its bond
|
---|
63 | m4_include([Molecules/RotateAroundBond/testsuite-molecules-rotate-around-bond.at])
|
---|
64 |
|
---|
65 | # Rotate around origin
|
---|
66 | m4_include([Molecules/RotateAroundOrigin/testsuite-molecules-rotate-around-origin.at])
|
---|
67 |
|
---|
68 | # Rotate around self
|
---|
69 | m4_include([Molecules/RotateAroundSelf/testsuite-molecules-rotate-around-self.at])
|
---|
70 |
|
---|
71 | # stretch one of its bond
|
---|
72 | m4_include([Molecules/StretchBond/testsuite-molecules-stretch-bond.at])
|
---|
73 | m4_include([Molecules/StretchBond/testsuite-molecules-stretch-bond-cyclic_bond.at])
|
---|
74 |
|
---|
75 | # anneal forces by one step
|
---|
76 | m4_include([Molecules/ForceAnnealing/testsuite-molecules-force-annealing.at])
|
---|