Candidate_v1.7.0
        stable
      
      
        
          | Last change
 on this file since 1ca493a was             0588e9, checked in by Frederik Heber <heber@…>, 12 years ago | 
        
          | 
AnalyseFragmentationResultsAction now also calculates and prints cycle correction.
 we calculate the energy with and without determined cycles per level and
print each energy.
we make use of the ValueMask for this.
new parameter fragment-prefix allows specifying a file containg the cycle
keysets.
added regression test for FragmentMolecule's DoCyclesFull.
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          | 
              
Property                 mode
 set to                 100644 | 
        
          | File size:
            2.0 KB | 
      
      
| Line |  | 
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| 1 | REMARK created by molecuilder on Fri Sep 27 20:25:54 2013, time step 0 | 
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| 2 | ATOM      1 H01 0non 01         -1.627   0.000  -0.001  0.00  0.00           H 0 | 
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| 3 | ATOM      2 C01 0non 01         -0.547   0.000  -0.002  0.00  0.00           C 0 | 
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| 4 | ATOM      3 C02 0non 01          0.154   1.207   0.001  0.00  0.00           C 0 | 
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| 5 | ATOM      4 C03 0non 01          0.154  -1.208   0.001  0.00  0.00           C 0 | 
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| 6 | ATOM      5 C04 0non 01          1.534   1.200   0.001  0.00  0.00           C 0 | 
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| 7 | ATOM      6 C05 0non 01          1.534  -1.200   0.001  0.00  0.00           C 0 | 
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| 8 | ATOM      7 C06 0non 01          2.222   0.000  -0.002  0.00  0.00           C 0 | 
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| 9 | ATOM      8 H02 0non 01         -0.382   2.145   0.003  0.00  0.00           H 0 | 
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| 10 | ATOM      9 H03 0non 01         -0.382  -2.145   0.004  0.00  0.00           H 0 | 
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| 11 | ATOM     10 H04 0non 01          2.078   2.133   0.002  0.00  0.00           H 0 | 
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| 12 | ATOM     11 H05 0non 01          2.077  -2.133   0.003  0.00  0.00           H 0 | 
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| 13 | ATOM     12 H06 0non 01          3.302   0.000  -0.003  0.00  0.00           H 0 | 
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| 14 | CONECT    1    2 | 
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| 15 | CONECT    2    1    3    4 | 
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| 16 | CONECT    3    2    5    8 | 
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| 17 | CONECT    4    2    6    9 | 
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| 18 | CONECT    5    3    7   10 | 
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| 19 | CONECT    6    4    7   11 | 
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| 20 | CONECT    7    5    6   12 | 
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| 21 | CONECT    8    3 | 
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| 22 | CONECT    9    4 | 
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| 23 | CONECT   10    5 | 
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| 24 | CONECT   11    6 | 
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| 25 | CONECT   12    7 | 
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| 26 | END | 
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