| [6253ed] | 1 | #
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 | 2 | #    MoleCuilder - creates and alters molecular systems
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 | 3 | #    Copyright (C) 2008-2012 University of Bonn
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 | 4 | #
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 | 5 | #    This program is free software: you can redistribute it and/or modify
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 | 6 | #    it under the terms of the GNU General Public License as published by
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 | 7 | #    the Free Software Foundation, either version 3 of the License, or
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 | 8 | #    (at your option) any later version.
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 | 9 | #
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 | 10 | #    This program is distributed in the hope that it will be useful,
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 | 11 | #    but WITHOUT ANY WARRANTY; without even the implied warranty of
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 | 12 | #    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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 | 13 | #    GNU General Public License for more details.
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 | 14 | #
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 | 15 | #    You should have received a copy of the GNU General Public License
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 | 16 | #    along with this program.  If not, see <http://www.gnu.org/licenses/>.
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 | 17 | #
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 | 18 | #
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 | 19 | #    MoleCuilder - creates and alters molecular systems
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 | 20 | #    Copyright (C) 2008-2012 University of Bonn
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 | 21 | #
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 | 22 | #    This program is free software: you can redistribute it and/or modify
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 | 23 | #    it under the terms of the GNU General Public License as published by
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 | 24 | #    the Free Software Foundation, either version 3 of the License, or
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 | 25 | #    (at your option) any later version.
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 | 26 | #
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 | 27 | #    This program is distributed in the hope that it will be useful,
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 | 28 | #    but WITHOUT ANY WARRANTY; without even the implied warranty of
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 | 29 | #    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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 | 30 | #    GNU General Public License for more details.
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 | 31 | #
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 | 32 | #    You should have received a copy of the GNU General Public License
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 | 33 | #    along with this program.  If not, see <http://www.gnu.org/licenses/>.
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 | 34 | #
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| [4fc828] | 35 | ### dipole angular correlation analysis
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 | 36 | 
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| [a860a1] | 37 | AT_SETUP([Analysis - dipole angular correlation on PDBs with CONECT, zero change])
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| [4fc828] | 38 | AT_KEYWORDS([analysis dipole correlation pdb dipole-angular-correlation])
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 | 39 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/pre/watermulti_X.pdb .], 0)
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| [c3a70d] | 40 | AT_CHECK([../../molecuilder -v 4 -i watermulti_X.pdb -o pdb --dipole-angular-correlation H2O --bin-start -5 --bin-width 10. --bin-end 184.5 --time-step-zero 0 --output-file water_values --bin-output-file water_histogram], 0, [stdout], [stderr])
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| [a860a1] | 41 | i=0; while test $i -ne 36; do 
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 | 42 |         step=`printf %04d $i`
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 | 43 |         AT_CHECK([diff water_histogram.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_histogram_X.dat], 0, [ignore], [ignore])
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 | 44 |         AT_CHECK([diff water_values.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_values_X.dat], 0, [ignore], [ignore])
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 | 45 |         let i=$i+1
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 | 46 | done
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 | 47 | AT_CLEANUP
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 | 48 | 
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 | 49 | AT_SETUP([Analysis - dipole angular correlation on PDBs with CONECT, true change])
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 | 50 | AT_KEYWORDS([analysis dipole correlation pdb dipole-angular-correlation])
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| [4fc828] | 51 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/pre/watermulti_Y.pdb .], 0)
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| [c3a70d] | 52 | AT_CHECK([../../molecuilder -v 4 -i watermulti_Y.pdb -o pdb --dipole-angular-correlation H2O --bin-start -5 --bin-width 10. --bin-end 184.5 --time-step-zero 0 --output-file water_values --bin-output-file water_histogram], 0, [stdout], [stderr])
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| [a860a1] | 53 | i=0; while test $i -ne 36; do 
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 | 54 |         step=`printf %04d $i`
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 | 55 |         AT_CHECK([diff water_histogram.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_histogram_Y.$step.dat], 0, [ignore], [ignore])
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 | 56 |         AT_CHECK([diff water_values.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_values_Y.$step.dat], 0, [ignore], [ignore])
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 | 57 |         let i=$i+1
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 | 58 | done
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| [4b8630] | 59 | AT_CLEANUP
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 | 60 | 
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| [a860a1] | 61 | AT_SETUP([Analysis - dipole angular correlation on XYZs, zero change])
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| [4b8630] | 62 | AT_KEYWORDS([analysis dipole correlation xyz dipole-angular-correlation])
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 | 63 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/pre/watermulti_X.xyz .], 0)
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| [c3a70d] | 64 | AT_CHECK([../../molecuilder -v 4 -i watermulti_X.xyz -o xyz -I --dipole-angular-correlation H2O --bin-start -5 --bin-width 10. --bin-end 184.5 --time-step-zero 0 --output-file water_values --bin-output-file water_histogram], 0, [stdout], [stderr])
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| [a860a1] | 65 | i=0; while test $i -ne 36; do 
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 | 66 |         step=`printf %04d $i`
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 | 67 |         AT_CHECK([diff water_histogram.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_histogram_X.dat], 0, [ignore], [ignore])
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 | 68 |         AT_CHECK([diff water_values.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_values_X.dat], 0, [ignore], [ignore])
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 | 69 |         let i=$i+1
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 | 70 | done
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 | 71 | AT_CLEANUP
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 | 72 | 
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 | 73 | AT_SETUP([Analysis - dipole angular correlation on XYZs, true change])
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 | 74 | AT_KEYWORDS([analysis dipole correlation xyz dipole-angular-correlation])
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| [4b8630] | 75 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/pre/watermulti_Y.xyz .], 0)
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| [c3a70d] | 76 | AT_CHECK([../../molecuilder -v 4 -i watermulti_Y.xyz -o xyz -I --dipole-angular-correlation H2O --bin-start -5 --bin-width 10. --bin-end 184.5 --time-step-zero 0 --output-file water_values --bin-output-file water_histogram], 0, [stdout], [stderr])
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| [a860a1] | 77 | i=0; while test $i -ne 36; do 
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 | 78 |         step=`printf %04d $i`
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 | 79 |         AT_CHECK([diff water_histogram.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_histogram_Y.$step.dat], 0, [ignore], [ignore])
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 | 80 |         AT_CHECK([diff water_values.$step.dat ${abs_top_srcdir}/tests/regression/Analysis/DipoleAngularCorrelation/post/water_values_Y.$step.dat], 0, [ignore], [ignore])
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 | 81 |         let i=$i+1
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 | 82 | done
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| [4fc828] | 83 | AT_CLEANUP
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 | 84 | 
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