[83fa5c] | 1 | #
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| 2 | # MoleCuilder - creates and alters molecular systems
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[2945e6] | 3 | # Copyright (C) 2017 Frederik Heber
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[83fa5c] | 4 | #
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| 5 | # This program is free software: you can redistribute it and/or modify
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| 6 | # it under the terms of the GNU General Public License as published by
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| 7 | # the Free Software Foundation, either version 3 of the License, or
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| 8 | # (at your option) any later version.
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| 9 | #
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| 10 | # This program is distributed in the hope that it will be useful,
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| 11 | # but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 12 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 13 | # GNU General Public License for more details.
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| 14 | #
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| 15 | # You should have received a copy of the GNU General Public License
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| 16 | # along with this program. If not, see <http://www.gnu.org/licenses/>.
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| 17 | #
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| 18 | ### test mpqc jobs
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| 19 |
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[fbf005] | 20 | # perform test with PoolWorkers using molecuilder_poolworker
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[83fa5c] | 21 | AT_SETUP([Integration - fragmentation plus automated fragment calculation via mpqc])
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[fbf005] | 22 | AT_KEYWORDS([fragmentation automation server poolworker molecuilder_poolworker])
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[83fa5c] | 23 |
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| 24 | # check that ports are unique over all tests such that they may run in parallel
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[ae14a1] | 25 | WORKERPORT=12020
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| 26 | CONTROLLERPORT=12021
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| 27 | WORKERLISTENPORT=12022
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[83fa5c] | 28 |
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| 29 | # start service in background
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[440ac3] | 30 | ${AUTOTEST_PATH}/molecuilder_server --workerport $WORKERPORT --controllerport $CONTROLLERPORT &
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[83fa5c] | 31 | server_pid=$!
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[599eca] | 32 | AT_CHECK([sleep 2], 0, [ignore], [ignore], [kill $server_pid])
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| 33 | AT_CHECK([kill -s 0 $server_pid], 0, [ignore], [ignore], [kill $server_pid])
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[83fa5c] | 34 |
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| 35 | # enlist a worker to work on jobs
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[fbf005] | 36 | ../../molecuilder_poolworker -v 5 --server 127.0.0.1:${WORKERPORT} --hostname 127.0.0.1 --listen $WORKERLISTENPORT &
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[2945e6] | 37 | worker_script_pid=$!
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| 38 | worker_pid=`ps -ef | grep molecuilder_poolworker | grep $worker_script_pid | awk '{print $2}'`
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[599eca] | 39 | AT_CHECK([sleep 2], 0, [ignore], [ignore], [kill $server_pid $worker_pid])
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| 40 | AT_CHECK([kill -s 0 $worker_pid], 0, [ignore], [ignore], [kill $server_pid $worker_pid])
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[83fa5c] | 41 |
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| 42 | # create jobs via molecuilder
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| 43 | molfile="ethane.pdb"
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| 44 | AT_CHECK([cp -f ${abs_top_srcdir}/tests/integration/pre/ethane.pdb $molfile], 0)
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| 45 | AT_CHECK([chmod +rw $molfile], 0)
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| 46 | AT_CHECK([../../molecuilder \
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| 47 | -i $molfile \
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| 48 | --select-all-atoms \
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| 49 | --update-molecules \
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| 50 | --set-parser-parameters mpqc \
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| 51 | --parser-parameters "theory=CLHF;basis=3-21G;" \
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| 52 | --fragment-molecule BondFragment \
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| 53 | --order 2 \
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| 54 | --grid-level 5 \
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| 55 | --fragment-automation \
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| 56 | --server-address 127.0.0.1 \
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| 57 | --server-port ${CONTROLLERPORT} \
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| 58 | --DoLongrange 0 \
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| 59 | --verbose 3 \
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| 60 | --analyse-fragment-results results.dat], 0, [stdout], [ignore], [kill $server_pid $worker_pid])
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| 61 |
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| 62 | # send removeall to server such that all workers shutdown
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[440ac3] | 63 | AT_CHECK([${AUTOTEST_PATH}/molecuilder_controller --server 127.0.0.1:$CONTROLLERPORT --command removeall], 0, [ignore], [ignore], [kill $server_pid $worker_pid])
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[83fa5c] | 64 |
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| 65 | # check that worker is truely down
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| 66 | AT_CHECK([sleep 1], 0, [ignore], [ignore], [kill $worker_pid $server_pid])
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| 67 | AT_CHECK([kill $worker_pid], 1, [ignore], [ignore], [kill $server_pid])
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| 68 |
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[440ac3] | 69 | # check number of done jobs
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| 70 | AT_CHECK([fgrep "There are 3 fragments" stdout], 0, [ignore], [ignore], [kill $server_pid])
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| 71 | AT_CHECK([fgrep "There are 1 molecules to consider" stdout], 0, [ignore], [ignore], [kill $server_pid])
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| 72 | AT_CHECK([fgrep "8 atoms selected." stdout], 0, [ignore], [ignore], [kill $server_pid])
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| 73 | AT_CHECK([tail -n 1 BondFragment_Energy.dat | awk '{if ($2!=-78.79298686) exit 1}'], 0, [ignore], [ignore], [kill $server_pid])
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| 74 |
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| 75 | # shutdown controller socket
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| 76 | AT_CHECK([${AUTOTEST_PATH}/molecuilder_controller --server 127.0.0.1:$CONTROLLERPORT --command shutdown], 0, [stdout], [ignore], [kill $server_pid])
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| 77 |
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[83fa5c] | 78 | # check that server is truely down
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| 79 | AT_CHECK([sleep 1], 0, [ignore], [ignore], [kill $server_pid])
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| 80 | AT_CHECK([kill $server_pid], 1, [ignore], [ignore])
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| 81 |
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| 82 | AT_CLEANUP
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