| 1 | # | 
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| 2 | #    MoleCuilder - creates and alters molecular systems | 
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| 3 | #    Copyright (C) 2017 Frederik Heber | 
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| 4 | # | 
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| 5 | #    This program is free software: you can redistribute it and/or modify | 
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| 6 | #    it under the terms of the GNU General Public License as published by | 
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| 7 | #    the Free Software Foundation, either version 3 of the License, or | 
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| 8 | #    (at your option) any later version. | 
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| 9 | # | 
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| 10 | #    This program is distributed in the hope that it will be useful, | 
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| 11 | #    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 12 | #    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 13 | #    GNU General Public License for more details. | 
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| 14 | # | 
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| 15 | #    You should have received a copy of the GNU General Public License | 
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| 16 | #    along with this program.  If not, see <http://www.gnu.org/licenses/>. | 
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| 17 | # | 
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| 18 | # Force Annealing with Ising model | 
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| 19 |  | 
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| 20 | AT_SETUP([Python externalization - Force Annealing without bondgraph on 2-body Ising model]) | 
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| 21 | AT_KEYWORDS([python force-annealing ising]) | 
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| 22 |  | 
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| 23 | # we use forces from a simple Ising model with 2 "carbon" atoms in a row along the x axis | 
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| 24 |  | 
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| 25 | file=two_carbon_test.data | 
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| 26 | AT_CHECK([../../run ${abs_top_srcdir}/tests/Python/ForceAnnealing/pre/ising_model_chain.py ./$file ./ 3 2 "0"], 0, [stdout], [ignore]) | 
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| 27 | AT_CHECK([grep "Largest remaining force components.*e-05" stdout], 0, [ignore], [ignore]) | 
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| 28 | AT_CHECK([diff $file ${abs_top_srcdir}/tests/Python/ForceAnnealing/post/two_carbon_test_no-bondgraph.data], 0, [ignore], [ignore]) | 
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| 29 |  | 
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| 30 | AT_CLEANUP | 
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| 31 |  | 
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| 32 | AT_SETUP([Python externalization - Force Annealing without bondgraph on 5-body Ising model]) | 
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| 33 | AT_KEYWORDS([python force-annealing ising]) | 
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| 34 |  | 
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| 35 | # we use forces from a simple Ising model with 5 "carbon" atoms in a row along the x axis | 
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| 36 |  | 
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| 37 | file=five_carbon_test.data | 
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| 38 | AT_CHECK([../../run ${abs_top_srcdir}/tests/Python/ForceAnnealing/pre/ising_model_chain.py ./$file ./ 15 5 "0"], 0, [stdout], [ignore]) | 
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| 39 | AT_CHECK([grep "Largest remaining force components.*e-05" stdout], 0, [ignore], [ignore]) | 
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| 40 | AT_CHECK([diff $file ${abs_top_srcdir}/tests/Python/ForceAnnealing/post/five_carbon_test_no-bondgraph.data], 0, [ignore], [ignore]) | 
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| 41 |  | 
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| 42 | AT_CLEANUP | 
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| 43 |  | 
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| 44 | AT_SETUP([Python externalization - Force Annealing with bondgraph on 2-body Ising model]) | 
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| 45 | AT_KEYWORDS([python force-annealing ising bondgraph]) | 
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| 46 | AT_SKIP_IF([../../run ${abs_top_srcdir}/tests/Python/numpy_check.py]) | 
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| 47 |  | 
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| 48 | # we use forces from a simple Ising model with 2 "carbon" atoms in a row along the x axis | 
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| 49 |  | 
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| 50 | file=two_carbon_test.data | 
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| 51 | AT_CHECK([../../run ${abs_top_srcdir}/tests/Python/ForceAnnealing/pre/ising_model_chain.py ./$file ./ 3 2 "1"], 0, [stdout], [ignore]) | 
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| 52 | AT_CHECK([grep "Largest remaining force components.*e-05" stdout], 0, [ignore], [ignore]) | 
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| 53 | AT_CHECK([diff $file ${abs_top_srcdir}/tests/Python/ForceAnnealing/post/two_carbon_test_bondgraph.data], 0, [ignore], [ignore]) | 
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| 54 |  | 
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| 55 | AT_CLEANUP | 
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| 56 |  | 
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| 57 | AT_SETUP([Python externalization - Force Annealing with bondgraph on 5-body Ising model]) | 
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| 58 | AT_KEYWORDS([python force-annealing ising bondgraph]) | 
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| 59 | AT_SKIP_IF([../../run ${abs_top_srcdir}/tests/Python/numpy_check.py]) | 
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| 60 |  | 
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| 61 | # we use forces from a simple Ising model with 5 "carbon" atoms in a row along the x axis | 
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| 62 |  | 
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| 63 | file=five_carbon_test.data | 
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| 64 | AT_CHECK([../../run ${abs_top_srcdir}/tests/Python/ForceAnnealing/pre/ising_model_chain.py ./$file ./ 30 5 "1"], 0, [stdout], [ignore]) | 
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| 65 | AT_CHECK([grep "Largest remaining force components.*0.00" stdout], 0, [ignore], [ignore]) | 
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| 66 | AT_CHECK([diff $file ${abs_top_srcdir}/tests/Python/ForceAnnealing/post/five_carbon_test_bondgraph.data], 0, [ignore], [ignore]) | 
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| 67 |  | 
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| 68 | AT_CLEANUP | 
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