| [d50b91] | 1 | # | 
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|  | 2 | #    MoleCuilder - creates and alters molecular systems | 
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|  | 3 | #    Copyright (C) 2016 Frederik Heber | 
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|  | 4 | # | 
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|  | 5 | #    This program is free software: you can redistribute it and/or modify | 
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|  | 6 | #    it under the terms of the GNU General Public License as published by | 
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|  | 7 | #    the Free Software Foundation, either version 3 of the License, or | 
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|  | 8 | #    (at your option) any later version. | 
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|  | 9 | # | 
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|  | 10 | #    This program is distributed in the hope that it will be useful, | 
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|  | 11 | #    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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|  | 12 | #    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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|  | 13 | #    GNU General Public License for more details. | 
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|  | 14 | # | 
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|  | 15 | #    You should have received a copy of the GNU General Public License | 
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|  | 16 | #    along with this program.  If not, see <http://www.gnu.org/licenses/>. | 
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|  | 17 | # | 
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|  | 18 | ### parse and save state of FragmentationResultsContainer | 
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|  | 19 |  | 
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|  | 20 | AT_SETUP([Fragmentation - parse and save fragment results]) | 
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|  | 21 | AT_KEYWORDS([fragmentation parse-fragment-results save-fragment-results]) | 
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|  | 22 | # results.dat is taken from Fragmentation/AnalyseFragmentationResults/pre/BondFragmentShortRangeResults.dat | 
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|  | 23 |  | 
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|  | 24 | file=results_new.dat | 
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|  | 25 | newfile=results_new2.dat | 
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|  | 26 |  | 
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|  | 27 | # fails because file is missing | 
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|  | 28 | AT_CHECK([../../molecuilder --dry-run --parse-fragment-results $file --save-fragment-results $file --no-dry-run --store-session session-fragmentation-parse-save-fragment-results.py --session-type python], 0, [ignore], [ignore]) | 
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|  | 29 | AT_CHECK([grep -v "Command.*DryRun" session-fragmentation-parse-save-fragment-results.py >session-fragmentation-parse-save-fragment-results_new.py], 0, [ignore], [ignore]) | 
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|  | 30 | AT_CHECK([../../molecuilderguitest session-fragmentation-parse-save-fragment-results_new.py], 5, [ignore], [ignore]) | 
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|  | 31 |  | 
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|  | 32 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/pre/results.dat results.dat], 0) | 
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|  | 33 | AT_CHECK([../../molecuilder --dry-run --parse-fragment-results results.dat --save-fragment-results $file --no-dry-run --store-session session-fragmentation-parse-save-fragment-results.py --session-type python], 0, [ignore], [ignore]) | 
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|  | 34 | AT_CHECK([grep -v "Command.*DryRun" session-fragmentation-parse-save-fragment-results.py >session-fragmentation-parse-save-fragment-results_new.py], 0, [ignore], [ignore]) | 
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|  | 35 | AT_CHECK([../../molecuilderguitest session-fragmentation-parse-save-fragment-results_new.py], 0, [ignore], [ignore]) | 
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|  | 36 | # we ignore white space changes (also missing new line on end of last line) | 
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| [b10593] | 37 | AT_CHECK([../../difffragmentresultcontainer $file ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_longrange_enabled.dat], 0, [ignore], [ignore], [ | 
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|  | 38 | AT_CHECK([../../difffragmentresultcontainer $file ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_longrange_disabled.dat], 0, [ignore], [ignore], [ | 
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|  | 39 | AT_CHECK([../../difffragmentresultcontainer $file ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_jobmarkt_disabled.dat], 0, [ignore], [ignore]) | 
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| [d50b91] | 40 | ]) | 
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|  | 41 | ]) | 
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|  | 42 |  | 
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|  | 43 | # fails because file is already present | 
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|  | 44 | AT_CHECK([../../molecuilder --dry-run --parse-fragment-results $file --save-fragment-results $file --no-dry-run --store-session session-fragmentation-parse-save-fragment-results.py --session-type python], 0, [ignore], [ignore]) | 
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|  | 45 | AT_CHECK([grep -v "Command.*DryRun" session-fragmentation-parse-save-fragment-results.py >session-fragmentation-parse-save-fragment-results_new.py], 0, [ignore], [ignore]) | 
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|  | 46 | AT_CHECK([../../molecuilderguitest session-fragmentation-parse-save-fragment-results_new.py], 5, [ignore], [ignore]) | 
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|  | 47 |  | 
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|  | 48 | AT_CHECK([../../molecuilder --dry-run --parse-fragment-results $file --save-fragment-results $newfile --no-dry-run --store-session session-fragmentation-parse-save-fragment-results.py --session-type python], 0, [ignore], [ignore]) | 
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|  | 49 | AT_CHECK([grep -v "Command.*DryRun" session-fragmentation-parse-save-fragment-results.py >session-fragmentation-parse-save-fragment-results_new.py], 0, [ignore], [ignore]) | 
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|  | 50 | AT_CHECK([../../molecuilderguitest session-fragmentation-parse-save-fragment-results_new.py], 0, [ignore], [ignore]) | 
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| [b10593] | 51 | AT_CHECK([../../difffragmentresultcontainer $file ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_longrange_enabled.dat], 0, [ignore], [ignore], [ | 
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|  | 52 | AT_CHECK([../../difffragmentresultcontainer $file ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_longrange_disabled.dat], 0, [ignore], [ignore], [ | 
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|  | 53 | AT_CHECK([../../difffragmentresultcontainer $file ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_jobmarkt_disabled.dat], 0, [ignore], [ignore]) | 
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| [d50b91] | 54 | ]) | 
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|  | 55 | ]) | 
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|  | 56 |  | 
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|  | 57 | AT_CLEANUP | 
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|  | 58 |  | 
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|  | 59 | AT_SETUP([Fragmentation - parse and save fragment results with Undo]) | 
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|  | 60 | AT_KEYWORDS([fragmentation parse-fragment-results save-fragment-results undo]) | 
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|  | 61 |  | 
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|  | 62 | emptyfile=results_empty.dat | 
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|  | 63 |  | 
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|  | 64 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/pre/results.dat results.dat], 0) | 
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|  | 65 | AT_CHECK([../../molecuilder --dry-run --parse-fragment-results results.dat --undo --save-fragment-results $emptyfile --no-dry-run --store-session session-fragmentation-parse-save-fragment-results.py --session-type python], 0, [ignore], [ignore]) | 
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|  | 66 | AT_CHECK([grep -v "Command.*DryRun" session-fragmentation-parse-save-fragment-results.py >session-fragmentation-parse-save-fragment-results_new.py], 0, [ignore], [ignore]) | 
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|  | 67 | AT_CHECK([../../molecuilderguitest session-fragmentation-parse-save-fragment-results_new.py], 0, [ignore], [ignore]) | 
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|  | 68 | # we ignore white space changes (also missing new line on end of last line) | 
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| [b10593] | 69 | AT_CHECK([../../difffragmentresultcontainer $emptyfile ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_empty_longrange_enabled.dat], 0, [ignore], [ignore], [ | 
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|  | 70 | AT_CHECK([../../difffragmentresultcontainer $emptyfile ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_empty_longrange_disabled.dat], 0, [ignore], [ignore], [ | 
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|  | 71 | AT_CHECK([../../difffragmentresultcontainer $emptyfile ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_empty_jobmarkt_disabled.dat], 0, [ignore], [ignore]) | 
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| [d50b91] | 72 | ]) | 
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|  | 73 | ]) | 
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|  | 74 |  | 
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|  | 75 | AT_CLEANUP | 
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|  | 76 |  | 
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|  | 77 | AT_SETUP([Fragmentation - parse and save fragment results with Redo]) | 
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|  | 78 | AT_KEYWORDS([fragmentation parse-fragment-results save-fragment-results undo redo]) | 
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|  | 79 |  | 
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|  | 80 | file=results_new.dat | 
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|  | 81 |  | 
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|  | 82 | AT_CHECK([/bin/cp -f ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/pre/results.dat results.dat], 0) | 
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|  | 83 | AT_CHECK([../../molecuilder --dry-run --parse-fragment-results results.dat --undo --redo --save-fragment-results $file --no-dry-run --store-session session-fragmentation-parse-save-fragment-results.py --session-type python], 0, [ignore], [ignore]) | 
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|  | 84 | AT_CHECK([grep -v "Command.*DryRun" session-fragmentation-parse-save-fragment-results.py >session-fragmentation-parse-save-fragment-results_new.py], 0, [ignore], [ignore]) | 
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|  | 85 | AT_CHECK([../../molecuilderguitest session-fragmentation-parse-save-fragment-results_new.py], 0, [ignore], [ignore]) | 
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|  | 86 | # we ignore white space changes (also missing new line on end of last line) | 
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| [b10593] | 87 | AT_CHECK([../../difffragmentresultcontainer $file ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_longrange_enabled.dat], 0, [ignore], [ignore], [ | 
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|  | 88 | AT_CHECK([../../difffragmentresultcontainer $file ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_longrange_disabled.dat], 0, [ignore], [ignore], [ | 
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|  | 89 | AT_CHECK([../../difffragmentresultcontainer $file ${abs_top_srcdir}/tests/regression/Fragmentation/ParseSaveFragmentResults/post/results_jobmarkt_disabled.dat], 0, [ignore], [ignore]) | 
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| [d50b91] | 90 | ]) | 
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|  | 91 | ]) | 
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|  | 92 |  | 
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|  | 93 | AT_CLEANUP | 
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