source: tests/Fragmentations/glucose/glucose.xyz@ 038713

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since 038713 was 038713, checked in by Frederik Heber <heber@…>, 14 years ago

Added Fragmentations test in the spirit of the Tesselations test.

  • configuration were taken over from Tesselations.
  • defs.in has been adapted to a new function called Fragmentation_run
  • the test files call this function along with order and distance argument.
  • so far we just check that exitcode of molecuilder is 0.
  • all tests are working.
  • Property mode set to 100644
File size: 825 bytes
Line 
124
2NCI NSC 406891 Sugar, grape
3C 0.5323 -0.5022 -0.1225
4C -0.6882 0.3464 0.2398
5C 1.8050 0.3228 0.0790
6O 0.5755 -1.6575 0.7174
7C -1.9609 -0.4786 0.0383
8O -0.5962 0.7541 1.6063
9C 3.0255 -0.5258 -0.2833
10O 1.7617 1.4781 -0.7609
11C -3.1630 0.3572 0.3952
12O -2.0529 -0.8863 -1.3282
13O 4.2142 0.2447 -0.0951
14O -4.0111 0.5807 -0.4350
15H 0.4621 -0.8131 -1.1648
16H -0.7212 1.2276 -0.4008
17H 1.8752 0.6338 1.1213
18H 0.6373 -1.3387 1.6282
19H -1.9279 -1.3598 0.6790
20H -0.5696 -0.0534 2.1377
21H 3.0584 -1.4070 0.3573
22H 2.9553 -0.8367 -1.3257
23H 1.7000 1.1593 -1.6717
24H -3.2661 0.7564 1.3934
25H -2.0795 -0.0788 -1.8596
26H 4.9576 -0.3256 -0.3339
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