| [4464ef] | 1 | # | 
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|  | 2 | #    MoleCuilder - creates and alters molecular systems | 
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|  | 3 | #    Copyright (C) 2008-2012 University of Bonn | 
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|  | 4 | # | 
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|  | 5 | #    This program is free software: you can redistribute it and/or modify | 
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|  | 6 | #    it under the terms of the GNU General Public License as published by | 
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|  | 7 | #    the Free Software Foundation, either version 3 of the License, or | 
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|  | 8 | #    (at your option) any later version. | 
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|  | 9 | # | 
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|  | 10 | #    This program is distributed in the hope that it will be useful, | 
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|  | 11 | #    but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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|  | 12 | #    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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|  | 13 | #    GNU General Public License for more details. | 
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|  | 14 | # | 
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|  | 15 | #    You should have received a copy of the GNU General Public License | 
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|  | 16 | #    along with this program.  If not, see <http://www.gnu.org/licenses/>. | 
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|  | 17 | # | 
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|  | 18 | ### fragment the molecule and check the number of configs | 
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|  | 19 |  | 
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|  | 20 | AT_SETUP([Examples - Simple h2o calculation]) | 
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|  | 21 | AT_KEYWORDS([fragmentation automation molecuilder server mpqc example]) | 
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|  | 22 |  | 
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|  | 23 | # check that ports are unique over all tests such that they may run in parallel | 
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| [440ac3] | 24 | WORKERPORT=4005 | 
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|  | 25 | CONTROLLERPORT=4006 | 
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|  | 26 | WORKERLISTENPORT=4007 | 
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| [4464ef] | 27 |  | 
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|  | 28 | # start service in background | 
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| [4e0e08] | 29 | ${AUTOTEST_PATH}/molecuilder_server --workerport $WORKERPORT --controllerport $CONTROLLERPORT & | 
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| [4464ef] | 30 | server_pid=$! | 
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| [440ac3] | 31 | AT_CHECK([sleep 2], 0, [ignore], [ignore], [kill $server_pid]) | 
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| [4464ef] | 32 |  | 
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|  | 33 | # enlist a worker to work on jobs | 
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| [fbf005] | 34 | ../../molecuilder_poolworker -v 5 --server 127.0.0.1:${WORKERPORT} --hostname 127.0.0.1 --listen $WORKERLISTENPORT & | 
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| [4464ef] | 35 | worker_pid=$! | 
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| [4e0e08] | 36 | AT_CHECK([sleep 1], 0, [ignore], [ignore], [kill $worker_pid $server_pid]) | 
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| [4464ef] | 37 |  | 
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|  | 38 | # use molecuilder to add jobs, wait for their completion and obtain results | 
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| [440ac3] | 39 | AT_CHECK([../../molecuilder \ | 
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|  | 40 | -i ${abs_top_srcdir}/tests/Examples/Simple/pre/water.pdb \ | 
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|  | 41 | -v 3 --select-all-atoms \ | 
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|  | 42 | --fragment-molecule BondFragment \ | 
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|  | 43 | --order 1 \ | 
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|  | 44 | --distance 2 \ | 
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|  | 45 | --fragment-automation \ | 
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|  | 46 | --server-address 127.0.0.1 \ | 
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|  | 47 | --server-port $CONTROLLERPORT \ | 
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| [4e0e08] | 48 | --DoLongrange 0], 0, [stdout], [ignore], [kill $worker_pid $server_pid]) | 
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|  | 49 | AT_CHECK([fgrep "There are 1 fragments" stdout], 0, [ignore], [ignore], [kill $worker_pid $server_pid]) | 
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|  | 50 | AT_CHECK([fgrep "Energy: -75.6976" stdout], 0, [ignore], [ignore], [kill $worker_pid $server_pid]) | 
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|  | 51 | AT_CHECK([egrep 'Forces: .-4.64797e-16,1.53012e-17,0.0915748.; .-0.0764258,4.19204e-18,-0.0457874.; .0.0764258,-1.94932e-17,-0.0457874.' stdout], 0, [ignore], [ignore], [kill $worker_pid $server_pid]) | 
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|  | 52 |  | 
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|  | 53 | # send removeall to server such that all workers shutdown | 
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|  | 54 | AT_CHECK([${AUTOTEST_PATH}/molecuilder_controller --server 127.0.0.1:$CONTROLLERPORT --command removeall], 0, [ignore], [ignore], [kill $worker_pid $server_pid]) | 
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|  | 55 | AT_CHECK([sleep 1], 0, [ignore], [ignore], [kill $worker_pid $server_pid]) | 
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|  | 56 | AT_CHECK([kill -s 0 $worker_pid], 1, [ignore], [ignore], [kill $server_pid]) | 
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|  | 57 |  | 
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|  | 58 | # shutdown for server | 
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|  | 59 | AT_CHECK([${AUTOTEST_PATH}/molecuilder_controller --server 127.0.0.1:$CONTROLLERPORT --command shutdown], 0, [stdout], [ignore], [kill $worker_pid $server_pid]) | 
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|  | 60 | AT_CHECK([sleep 1], 0, [ignore], [ignore], [kill $worker_pid $server_pid]) | 
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|  | 61 | AT_CHECK([kill -s 0 $server_pid], 1, [ignore], [ignore]) | 
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| [4464ef] | 62 |  | 
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|  | 63 | AT_CLEANUP | 
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