source: tests/Examples/Simple/testsuite-examples-simple-h2o.at@ 4464ef

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Last change on this file since 4464ef was 4464ef, checked in by Frederik Heber <heber@…>, 8 years ago

Added Examples tests that integrate the full fragment automation pipeline.

  • Property mode set to 100644
File size: 2.8 KB
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[4464ef]1#
2# MoleCuilder - creates and alters molecular systems
3# Copyright (C) 2008-2012 University of Bonn
4#
5# This program is free software: you can redistribute it and/or modify
6# it under the terms of the GNU General Public License as published by
7# the Free Software Foundation, either version 3 of the License, or
8# (at your option) any later version.
9#
10# This program is distributed in the hope that it will be useful,
11# but WITHOUT ANY WARRANTY; without even the implied warranty of
12# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
13# GNU General Public License for more details.
14#
15# You should have received a copy of the GNU General Public License
16# along with this program. If not, see <http://www.gnu.org/licenses/>.
17#
18### fragment the molecule and check the number of configs
19
20AT_SETUP([Examples - Simple h2o calculation])
21AT_KEYWORDS([fragmentation automation molecuilder server mpqc example])
22
23# check that ports are unique over all tests such that they may run in parallel
24WORKERPORT=2065
25CONTROLLERPORT=2066
26WORKERLISTENPORT=2067
27
28# start service in background
29${AUTOTEST_PATH}/Server --workerport $WORKERPORT --controllerport $CONTROLLERPORT &
30server_pid=$!
31AT_CHECK([sleep 1], 0, [ignore], [ignore], [kill $server_pid])
32
33# enlist a worker to work on jobs
34${AUTOTEST_PATH}/../ThirdParty/mpqc_open/src/bin/mpqc/mpqc -n "+v 5 ++signal 2 ++server 127.0.0.1:${WORKERPORT} ++hostname 127.0.0.1 ++listen $WORKERLISTENPORT" &
35worker_pid=$!
36AT_CHECK([sleep 1], 0, [ignore], [ignore], [kill $server_pid $worker_pid])
37
38# use molecuilder to add jobs, wait for their completion and obtain results
39AT_CHECK([../../molecuilder -i ${abs_top_srcdir}/tests/Examples/Simple/pre/water.pdb -v 3 --select-all-atoms --fragment-molecule BondFragment --order 1 --distance 2 --fragment-automation --server-address 127.0.0.1 --server-port $CONTROLLERPORT], 0, [stdout], [ignore], [kill $server_pid $worker_pid])
40AT_CHECK([fgrep "There are 1 fragments" stdout], 0, [ignore], [ignore], [kill $server_pid $worker_pid])
41AT_CHECK([fgrep "Energy: -75.6976" stdout], 0, [ignore], [ignore], [kill $server_pid $worker_pid])
42AT_CHECK([egrep 'Forces: .-4.64797e-16,1.53012e-17,0.0915748.; .-0.0764258,4.19204e-18,-0.0457874.; .0.0764258,-1.94932e-17,-0.0457874.' stdout], 0, [ignore], [ignore], [kill $server_pid $worker_pid])
43
44# removeall to remove workers, then shutdown for server itself
45AT_CHECK([${AUTOTEST_PATH}/Controller --server 127.0.0.1:$CONTROLLERPORT --command removeall], 0, [stdout], [ignore], [kill $server_pid $worker_pid])
46AT_CHECK([${AUTOTEST_PATH}/Controller --server 127.0.0.1:$CONTROLLERPORT --command shutdown], 0, [stdout], [ignore], [kill $server_pid $worker_pid])
47
48# check that server is truely down
49AT_CHECK([sleep 1], 0, [ignore], [ignore], [kill $server_pid $worker_pid])
50AT_CHECK([kill $server_pid $worker_pid], 1, [ignore], [ignore])
51
52AT_CLEANUP
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