Action_Thermostats
        Add_AtomRandomPerturbation
        Add_FitFragmentPartialChargesAction
        Add_RotateAroundBondAction
        Add_SelectAtomByNameAction
        Added_ParseSaveFragmentResults
        AddingActions_SaveParseParticleParameters
        Adding_Graph_to_ChangeBondActions
        Adding_MD_integration_tests
        Adding_ParticleName_to_Atom
        Adding_StructOpt_integration_tests
        AtomFragments
        Automaking_mpqc_open
        AutomationFragmentation_failures
        Candidate_v1.5.4
        Candidate_v1.6.0
        Candidate_v1.6.1
        Candidate_v1.7.0
        ChangeBugEmailaddress
        ChangingTestPorts
        ChemicalSpaceEvaluator
        CombiningParticlePotentialParsing
        Combining_Subpackages
        Debian_Package_split
        Debian_package_split_molecuildergui_only
        Disabling_MemDebug
        Docu_Python_wait
        EmpiricalPotential_contain_HomologyGraph
        EmpiricalPotential_contain_HomologyGraph_documentation
        Enable_parallel_make_install
        Enhance_userguide
        Enhanced_StructuralOptimization
        Enhanced_StructuralOptimization_continued
        Example_ManyWaysToTranslateAtom
        Exclude_Hydrogens_annealWithBondGraph
        FitPartialCharges_GlobalError
        Fix_BoundInBox_CenterInBox_MoleculeActions
        Fix_ChargeSampling_PBC
        Fix_ChronosMutex
        Fix_FitPartialCharges
        Fix_FitPotential_needs_atomicnumbers
        Fix_ForceAnnealing
        Fix_IndependentFragmentGrids
        Fix_ParseParticles
        Fix_ParseParticles_split_forward_backward_Actions
        Fix_PopActions
        Fix_QtFragmentList_sorted_selection
        Fix_Restrictedkeyset_FragmentMolecule
        Fix_StatusMsg
        Fix_StepWorldTime_single_argument
        Fix_Verbose_Codepatterns
        Fix_fitting_potentials
        Fixes
        ForceAnnealing_goodresults
        ForceAnnealing_oldresults
        ForceAnnealing_tocheck
        ForceAnnealing_with_BondGraph
        ForceAnnealing_with_BondGraph_continued
        ForceAnnealing_with_BondGraph_continued_betteresults
        ForceAnnealing_with_BondGraph_contraction-expansion
        FragmentAction_writes_AtomFragments
        FragmentMolecule_checks_bonddegrees
        GeometryObjects
        Gui_Fixes
        Gui_displays_atomic_force_velocity
        ImplicitCharges
        IndependentFragmentGrids
        IndependentFragmentGrids_IndividualZeroInstances
        IndependentFragmentGrids_IntegrationTest
        IndependentFragmentGrids_Sole_NN_Calculation
        JobMarket_RobustOnKillsSegFaults
        JobMarket_StableWorkerPool
        JobMarket_unresolvable_hostname_fix
        MoreRobust_FragmentAutomation
        ODR_violation_mpqc_open
        PartialCharges_OrthogonalSummation
        PdbParser_setsAtomName
        PythonUI_with_named_parameters
        QtGui_reactivate_TimeChanged_changes
        Recreated_GuiChecks
        Rewrite_FitPartialCharges
        RotateToPrincipalAxisSystem_UndoRedo
        SaturateAtoms_findBestMatching
        SaturateAtoms_singleDegree
        StoppableMakroAction
        Subpackage_CodePatterns
        Subpackage_JobMarket
        Subpackage_LinearAlgebra
        Subpackage_levmar
        Subpackage_mpqc_open
        Subpackage_vmg
        Switchable_LogView
        ThirdParty_MPQC_rebuilt_buildsystem
        TrajectoryDependenant_MaxOrder
        TremoloParser_IncreasedPrecision
        TremoloParser_MultipleTimesteps
        TremoloParser_setsAtomName
        Ubuntu_1604_changes
        stable
      
      
        
          | 
            Last change
 on this file since d02e07 was             5f612ee, checked in by Frederik Heber <heber@…>, 16 years ago           | 
        
        
          | 
             
Merge branch 'Analysis_PairCorrelation' into StructureRefactoring 
 
Conflicts: 
 
molecuilder/src/Makefile.am 
molecuilder/src/World.cpp 
molecuilder/src/World.hpp 
molecuilder/src/boundary.cpp 
molecuilder/src/builder.cpp 
molecuilder/src/log.cpp 
molecuilder/src/moleculelist.cpp 
molecuilder/src/periodentafel.cpp 
molecuilder/src/tesselation.cpp 
molecuilder/src/unittests/AnalysisCorrelationToSurfaceUnitTest.cpp 
molecuilder/src/unittests/Makefile.am 
molecuilder/src/unittests/bondgraphunittest.cpp 
molecuilder/src/unittests/gslvectorunittest.cpp 
molecuilder/src/unittests/logunittest.cpp 
molecuilder/src/unittests/tesselation_boundarytriangleunittest.hpp 
molecuilder/src/vector.cpp 
molecuilder/tests/Tesselations/defs.in 
 
 
Conflicts have been many and too numerous to listen here, just the few general cases 
 
- new molecule() replaced by World::getInstance().createMolecule()
 - new atom() replaced by World::getInstance().createAtom() where appropriate.
 - Some DoLog()s added interfered with changes to the message produced by Log() << Verbose(.) << ...
 - DoLog() has been erroneously added to TestRunner.cpp as well, there cout is appropriate
 - ...
 
 
Additionally, there was a bug in atom::clone(), sort was set to atom::nr of the atom to clone not of the clone itself. This caused a failure of the fragmentation. 
 
This merge has been fully checked from a clean build directory with subsequent configure,make all install and make check. 
It configures, compiles and runs all test cases and the test suite without errors. 
 
Signed-off-by: Frederik Heber <heber@…> 
 
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            File size:
            1.4 KB
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| Rev | Line |   | 
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| [06c7a3] | 1 | /*
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 | 2 |  * logunittest.cpp
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 | 3 |  */
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 | 4 | 
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 | 5 | 
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 | 6 | using namespace std;
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 | 7 | 
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 | 8 | #include <cppunit/CompilerOutputter.h>
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 | 9 | #include <cppunit/extensions/TestFactoryRegistry.h>
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 | 10 | #include <cppunit/ui/text/TestRunner.h>
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 | 11 | 
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 | 12 | #include "logunittest.hpp"
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 | 13 | #include "log.hpp"
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 | 14 | #include "defs.hpp"
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 | 15 | #include "verbose.hpp"
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 | 16 | 
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| [9b6b2f] | 17 | #ifdef HAVE_TESTRUNNER
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 | 18 | #include "UnitTestMain.hpp"
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 | 19 | #endif /*HAVE_TESTRUNNER*/
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 | 20 | 
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| [06c7a3] | 21 | /********************************************** Test classes **************************************/
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 | 22 | 
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 | 23 | // Registers the fixture into the 'registry'
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 | 24 | CPPUNIT_TEST_SUITE_REGISTRATION( LogTest );
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 | 25 | 
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 | 26 | 
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 | 27 | void LogTest::setUp()
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 | 28 | {
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 | 29 | };
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 | 30 | 
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 | 31 | void LogTest::tearDown()
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 | 32 | {
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| [e6fdbe] | 33 |   logger::purgeInstance();
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 | 34 |   errorLogger::purgeInstance();
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| [06c7a3] | 35 | };
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 | 36 | 
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 | 37 | /**
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 | 38 |  * UnitTest for log()
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 | 39 |  */
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 | 40 | void LogTest::logTest()
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 | 41 | {
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| [aee1a3] | 42 |   logger::getInstance().setVerbosity(2);
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| [a67d19] | 43 |   DoLog(0) && (Log() << Verbose(0) << "Verbosity level is set to 2." << endl);
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 | 44 |   DoLog(0) && (Log() << Verbose(0) << "Test level 0" << endl);
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 | 45 |   DoLog(1) && (Log() << Verbose(1) << "Test level 1" << endl);
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 | 46 |   DoLog(2) && (Log() << Verbose(2) << "Test level 2" << endl);
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 | 47 |   DoLog(3) && (Log() << Verbose(3) << "Test level 3" << endl);
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 | 48 |   DoLog(4) && (Log() << Verbose(4) << "Test level 4" << endl);
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 | 49 | 
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 | 50 |   DoLog(0) && (Log() << Verbose(0) << "Output a log message." << endl);
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| [58ed4a] | 51 |   DoeLog(0) && (eLog()<< Verbose(0) << "Output an error message." << endl);
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| [06c7a3] | 52 |   setVerbosity(3);
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| [a67d19] | 53 |   DoLog(4) && (Log() << Verbose(4) << "This should not be printed." << endl);
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| [58ed4a] | 54 |   DoeLog(4) && (eLog()<< Verbose(4) << "This should not be printed." << endl);
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| [06c7a3] | 55 | };
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