| [357fba] | 1 | /* | 
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|  | 2 | * tesselation.hpp | 
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|  | 3 | * | 
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|  | 4 | *  The tesselation class is meant to contain the envelope (concave, convex or neither) of a set of Vectors. As we actually mean this stuff for atoms, we have to encapsulate it all a bit. | 
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|  | 5 | * | 
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|  | 6 | *  Created on: Aug 3, 2009 | 
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|  | 7 | *      Author: heber | 
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|  | 8 | */ | 
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|  | 9 |  | 
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|  | 10 | #ifndef TESSELATION_HPP_ | 
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|  | 11 | #define TESSELATION_HPP_ | 
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|  | 12 |  | 
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|  | 13 | using namespace std; | 
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|  | 14 |  | 
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| [f66195] | 15 | /*********************************************** includes ***********************************/ | 
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|  | 16 |  | 
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| [357fba] | 17 | // include config.h | 
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|  | 18 | #ifdef HAVE_CONFIG_H | 
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|  | 19 | #include <config.h> | 
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|  | 20 | #endif | 
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|  | 21 |  | 
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|  | 22 | #include <map> | 
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|  | 23 | #include <list> | 
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| [7c14ec] | 24 | #include <set> | 
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| [357fba] | 25 |  | 
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|  | 26 | #include "vector.hpp" | 
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|  | 27 |  | 
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| [f66195] | 28 | /****************************************** forward declarations *****************************/ | 
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|  | 29 |  | 
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| [357fba] | 30 | class BoundaryPointSet; | 
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|  | 31 | class BoundaryLineSet; | 
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|  | 32 | class BoundaryTriangleSet; | 
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| [f66195] | 33 | class LinkedCell; | 
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| [357fba] | 34 | class TesselPoint; | 
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|  | 35 | class PointCloud; | 
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|  | 36 | class Tesselation; | 
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|  | 37 |  | 
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| [f66195] | 38 | /********************************************** definitions *********************************/ | 
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|  | 39 |  | 
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| [57066a] | 40 | #define DoTecplotOutput 1 | 
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|  | 41 | #define DoRaster3DOutput 1 | 
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|  | 42 | #define DoVRMLOutput 1 | 
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|  | 43 | #define TecplotSuffix ".dat" | 
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|  | 44 | #define Raster3DSuffix ".r3d" | 
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|  | 45 | #define VRMLSUffix ".wrl" | 
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|  | 46 |  | 
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| [357fba] | 47 | // ======================================================= some template functions ========================================= | 
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|  | 48 |  | 
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|  | 49 | #define PointMap map < int, class BoundaryPointSet * > | 
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|  | 50 | #define PointPair pair < int, class BoundaryPointSet * > | 
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|  | 51 | #define PointTestPair pair < PointMap::iterator, bool > | 
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|  | 52 | #define CandidateList list <class CandidateForTesselation *> | 
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|  | 53 |  | 
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|  | 54 | #define LineMap multimap < int, class BoundaryLineSet * > | 
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|  | 55 | #define LinePair pair < int, class BoundaryLineSet * > | 
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|  | 56 | #define LineTestPair pair < LineMap::iterator, bool > | 
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|  | 57 |  | 
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|  | 58 | #define TriangleMap map < int, class BoundaryTriangleSet * > | 
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|  | 59 | #define TrianglePair pair < int, class BoundaryTriangleSet * > | 
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|  | 60 | #define TriangleTestPair pair < TrianglePair::iterator, bool > | 
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|  | 61 |  | 
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|  | 62 | #define DistanceMultiMap multimap <double, pair < PointMap::iterator, PointMap::iterator> > | 
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|  | 63 | #define DistanceMultiMapPair pair <double, pair < PointMap::iterator, PointMap::iterator> > | 
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|  | 64 |  | 
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| [f66195] | 65 | /********************************************** declarations *******************************/ | 
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| [357fba] | 66 |  | 
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|  | 67 | template <typename T> void SetEndpointsOrdered(T endpoints[2], T endpoint1, T endpoint2) | 
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|  | 68 | { | 
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|  | 69 | if (endpoint1->Nr < endpoint2->Nr) { | 
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|  | 70 | endpoints[0] = endpoint1; | 
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|  | 71 | endpoints[1] = endpoint2; | 
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|  | 72 | } else { | 
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|  | 73 | endpoints[0] = endpoint2; | 
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|  | 74 | endpoints[1] = endpoint1; | 
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|  | 75 | } | 
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|  | 76 | }; | 
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|  | 77 |  | 
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|  | 78 | // ======================================================== class BoundaryPointSet ========================================= | 
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|  | 79 |  | 
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|  | 80 | class BoundaryPointSet { | 
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|  | 81 | public: | 
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|  | 82 | BoundaryPointSet(); | 
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|  | 83 | BoundaryPointSet(TesselPoint *Walker); | 
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|  | 84 | ~BoundaryPointSet(); | 
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|  | 85 |  | 
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|  | 86 | void AddLine(class BoundaryLineSet *line); | 
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|  | 87 |  | 
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|  | 88 | LineMap lines; | 
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|  | 89 | int LinesCount; | 
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|  | 90 | TesselPoint *node; | 
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| [16d866] | 91 | double value; | 
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| [357fba] | 92 | int Nr; | 
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|  | 93 | }; | 
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|  | 94 |  | 
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|  | 95 | ostream & operator << (ostream &ost, BoundaryPointSet &a); | 
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|  | 96 |  | 
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|  | 97 | // ======================================================== class BoundaryLineSet ========================================== | 
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|  | 98 |  | 
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|  | 99 | class BoundaryLineSet { | 
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|  | 100 | public: | 
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|  | 101 | BoundaryLineSet(); | 
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|  | 102 | BoundaryLineSet(class BoundaryPointSet *Point[2], int number); | 
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|  | 103 | ~BoundaryLineSet(); | 
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|  | 104 |  | 
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|  | 105 | void AddTriangle(class BoundaryTriangleSet *triangle); | 
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|  | 106 | bool IsConnectedTo(class BoundaryLineSet *line); | 
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|  | 107 | bool ContainsBoundaryPoint(class BoundaryPointSet *point); | 
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|  | 108 | bool CheckConvexityCriterion(ofstream *out); | 
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| [62bb91] | 109 | class BoundaryPointSet *GetOtherEndpoint(class BoundaryPointSet *); | 
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| [357fba] | 110 |  | 
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|  | 111 | class BoundaryPointSet *endpoints[2]; | 
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|  | 112 | TriangleMap triangles; | 
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|  | 113 | int Nr; | 
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|  | 114 | }; | 
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|  | 115 |  | 
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|  | 116 | ostream & operator << (ostream &ost, BoundaryLineSet &a); | 
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|  | 117 |  | 
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|  | 118 | // ======================================================== class BoundaryTriangleSet ======================================= | 
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|  | 119 |  | 
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|  | 120 | class BoundaryTriangleSet { | 
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|  | 121 | public: | 
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|  | 122 | BoundaryTriangleSet(); | 
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|  | 123 | BoundaryTriangleSet(class BoundaryLineSet *line[3], int number); | 
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|  | 124 | ~BoundaryTriangleSet(); | 
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|  | 125 |  | 
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|  | 126 | void GetNormalVector(Vector &NormalVector); | 
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| [57066a] | 127 | void GetCenter(Vector *center); | 
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| [357fba] | 128 | bool GetIntersectionInsideTriangle(ofstream *out, Vector *MolCenter, Vector *x, Vector *Intersection); | 
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|  | 129 | bool ContainsBoundaryLine(class BoundaryLineSet *line); | 
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|  | 130 | bool ContainsBoundaryPoint(class BoundaryPointSet *point); | 
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| [7dea7c] | 131 | bool ContainsBoundaryPoint(class TesselPoint *point); | 
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| [62bb91] | 132 | class BoundaryPointSet *GetThirdEndpoint(class BoundaryLineSet *line); | 
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| [357fba] | 133 | bool IsPresentTupel(class BoundaryPointSet *Points[3]); | 
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| [57066a] | 134 | bool IsPresentTupel(class BoundaryTriangleSet *T); | 
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| [357fba] | 135 |  | 
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|  | 136 | class BoundaryPointSet *endpoints[3]; | 
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|  | 137 | class BoundaryLineSet *lines[3]; | 
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|  | 138 | Vector NormalVector; | 
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|  | 139 | int Nr; | 
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|  | 140 | }; | 
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|  | 141 |  | 
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|  | 142 | ostream & operator << (ostream &ost, BoundaryTriangleSet &a); | 
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|  | 143 |  | 
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|  | 144 | // =========================================================== class TESSELPOINT =========================================== | 
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|  | 145 |  | 
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|  | 146 | /** Is a single point of the set of Vectors, also a super-class to be inherited and and its functions to be implemented. | 
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|  | 147 | */ | 
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|  | 148 | class TesselPoint { | 
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|  | 149 | public: | 
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|  | 150 | TesselPoint(); | 
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| [5c7bf8] | 151 | virtual ~TesselPoint(); | 
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| [357fba] | 152 |  | 
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|  | 153 | Vector *node;   // pointer to position of the dot in space | 
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|  | 154 | int nr;       // index to easierly identify | 
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|  | 155 | char *Name;   // some name to reference to on output | 
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| [5c7bf8] | 156 |  | 
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|  | 157 | virtual ostream & operator << (ostream &ost); | 
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| [357fba] | 158 | }; | 
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|  | 159 |  | 
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|  | 160 | ostream & operator << (ostream &ost, const TesselPoint &a); | 
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|  | 161 |  | 
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|  | 162 | // =========================================================== class POINTCLOUD ============================================ | 
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|  | 163 |  | 
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|  | 164 | /** Super-class for all point clouds structures, also molecules. They have to inherit this structure and implement the virtual function to access the Vectors. | 
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|  | 165 | * This basically encapsulates a list structure. | 
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|  | 166 | */ | 
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|  | 167 | class PointCloud { | 
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|  | 168 | public: | 
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|  | 169 | PointCloud(); | 
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| [ab1932] | 170 | virtual ~PointCloud(); | 
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| [357fba] | 171 |  | 
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|  | 172 | virtual Vector *GetCenter(ofstream *out) { return NULL; }; | 
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|  | 173 | virtual TesselPoint *GetPoint() { return NULL; }; | 
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|  | 174 | virtual TesselPoint *GetTerminalPoint() { return NULL; }; | 
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|  | 175 | virtual void GoToNext() {}; | 
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|  | 176 | virtual void GoToPrevious() {}; | 
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|  | 177 | virtual void GoToFirst() {}; | 
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|  | 178 | virtual void GoToLast() {}; | 
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|  | 179 | virtual bool IsEmpty() { return false; }; | 
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| [1999d8] | 180 | virtual bool IsEnd() { return false; }; | 
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| [357fba] | 181 | }; | 
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|  | 182 |  | 
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|  | 183 | // ======================================================== class CandidateForTesselation ========================================= | 
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|  | 184 |  | 
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|  | 185 | class CandidateForTesselation { | 
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|  | 186 | public : | 
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|  | 187 | CandidateForTesselation(TesselPoint* candidate, BoundaryLineSet* currentBaseLine, Vector OptCandidateCenter, Vector OtherOptCandidateCenter); | 
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|  | 188 | ~CandidateForTesselation(); | 
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|  | 189 |  | 
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|  | 190 | TesselPoint *point; | 
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|  | 191 | BoundaryLineSet *BaseLine; | 
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|  | 192 | Vector OptCenter; | 
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|  | 193 | Vector OtherOptCenter; | 
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|  | 194 | }; | 
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|  | 195 |  | 
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|  | 196 | // =========================================================== class TESSELATION =========================================== | 
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|  | 197 |  | 
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|  | 198 | /** Contains the envelope to a PointCloud. | 
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|  | 199 | */ | 
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| [5c7bf8] | 200 | class Tesselation : public PointCloud { | 
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| [357fba] | 201 | public: | 
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|  | 202 |  | 
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|  | 203 | Tesselation(); | 
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| [5c7bf8] | 204 | virtual ~Tesselation(); | 
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| [357fba] | 205 |  | 
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| [16d866] | 206 | void AddTesselationPoint(TesselPoint* Candidate, int n); | 
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|  | 207 | void AddTesselationLine(class BoundaryPointSet *a, class BoundaryPointSet *b, int n); | 
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|  | 208 | void AlwaysAddTesselationTriangleLine(class BoundaryPointSet *a, class BoundaryPointSet *b, int n); | 
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|  | 209 | void AddTesselationTriangle(); | 
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| [7dea7c] | 210 | void AddTesselationTriangle(int nr); | 
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| [16d866] | 211 | void RemoveTesselationTriangle(class BoundaryTriangleSet *triangle); | 
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|  | 212 | void RemoveTesselationLine(class BoundaryLineSet *line); | 
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|  | 213 | void RemoveTesselationPoint(class BoundaryPointSet *point); | 
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|  | 214 |  | 
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| [357fba] | 215 | class BoundaryPointSet *GetCommonEndpoint(class BoundaryLineSet * line1, class BoundaryLineSet * line2); | 
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|  | 216 |  | 
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|  | 217 | // concave envelope | 
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| [f1cccd] | 218 | void FindStartingTriangle(ofstream *out, const double RADIUS, class LinkedCell *LC); | 
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| [57066a] | 219 | void FindSecondPointForTesselation(class TesselPoint* a, Vector Oben, class TesselPoint*& OptCandidate, double Storage[3], double RADIUS, class LinkedCell *LC); | 
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| [f1cccd] | 220 | void FindThirdPointForTesselation(Vector NormalVector, Vector SearchDirection, Vector OldSphereCenter, class BoundaryLineSet *BaseLine, class TesselPoint *ThirdNode, CandidateList* &candidates, double *ShortestAngle, const double RADIUS, class LinkedCell *LC); | 
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| [57066a] | 221 | bool FindNextSuitableTriangle(ofstream *out, BoundaryLineSet &Line, BoundaryTriangleSet &T, const double& RADIUS, LinkedCell *LC); | 
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| [357fba] | 222 | int CheckPresenceOfTriangle(ofstream *out, class TesselPoint *Candidates[3]); | 
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| [065e82] | 223 | class BoundaryTriangleSet * GetPresentTriangle(ofstream *out, TesselPoint *Candidates[3]); | 
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| [357fba] | 224 |  | 
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|  | 225 | // convex envelope | 
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|  | 226 | void TesselateOnBoundary(ofstream *out, PointCloud *cloud); | 
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|  | 227 | void GuessStartingTriangle(ofstream *out); | 
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| [62bb91] | 228 | bool InsertStraddlingPoints(ofstream *out, PointCloud *cloud, LinkedCell *LC); | 
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| [16d866] | 229 | double RemovePointFromTesselatedSurface(ofstream *out, class BoundaryPointSet *point); | 
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| [57066a] | 230 | class BoundaryLineSet * FlipBaseline(ofstream *out, class BoundaryLineSet *Base); | 
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|  | 231 | double PickFarthestofTwoBaselines(ofstream *out, class BoundaryLineSet *Base); | 
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| [16d866] | 232 | class BoundaryPointSet *IsConvexRectangle(ofstream *out, class BoundaryLineSet *Base); | 
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| [57066a] | 233 | map<int, int> * FindAllDegeneratedTriangles(); | 
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|  | 234 | map<int, int> * FindAllDegeneratedLines(); | 
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| [7c14ec] | 235 | void RemoveDegeneratedTriangles(); | 
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| [57066a] | 236 | void AddBoundaryPointByDegeneratedTriangle(ofstream *out, class TesselPoint *point, LinkedCell *LC); | 
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| [16d866] | 237 |  | 
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| [065e82] | 238 | set<TesselPoint*> * GetAllConnectedPoints(ofstream *out, TesselPoint* Point); | 
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|  | 239 | set<BoundaryTriangleSet*> *GetAllTriangles(ofstream *out, class BoundaryPointSet *Point); | 
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|  | 240 | list<list<TesselPoint*> *> * GetPathsOfConnectedPoints(ofstream *out, TesselPoint* Point); | 
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|  | 241 | list<list<TesselPoint*> *> * GetClosedPathsOfConnectedPoints(ofstream *out, TesselPoint* Point); | 
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|  | 242 | list<TesselPoint*> * GetCircleOfConnectedPoints(ofstream *out, TesselPoint* Point, Vector *Reference = NULL); | 
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| [ab1932] | 243 | list<BoundaryTriangleSet*> *FindTriangles(TesselPoint* Points[3]); | 
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| [62bb91] | 244 | list<BoundaryTriangleSet*> * FindClosestTrianglesToPoint(ofstream *out, Vector *x, LinkedCell* LC); | 
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|  | 245 | class BoundaryTriangleSet * FindClosestTriangleToPoint(ofstream *out, Vector *x, LinkedCell* LC); | 
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|  | 246 | bool IsInnerPoint(ofstream *out, Vector Point, LinkedCell* LC); | 
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|  | 247 | bool IsInnerPoint(ofstream *out, TesselPoint *Point, LinkedCell* LC); | 
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| [16d866] | 248 | bool AddBoundaryPoint(TesselPoint *Walker, int n); | 
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| [ab1932] | 249 |  | 
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| [0077b5] | 250 | // print for debugging | 
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|  | 251 | void PrintAllBoundaryPoints(ofstream *out); | 
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|  | 252 | void PrintAllBoundaryLines(ofstream *out); | 
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|  | 253 | void PrintAllBoundaryTriangles(ofstream *out); | 
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|  | 254 |  | 
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| [57066a] | 255 | // store envelope in file | 
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|  | 256 | void Output(ofstream *out, const char *filename, PointCloud *cloud); | 
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| [0077b5] | 257 |  | 
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| [357fba] | 258 | PointMap PointsOnBoundary; | 
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|  | 259 | LineMap LinesOnBoundary; | 
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|  | 260 | TriangleMap TrianglesOnBoundary; | 
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|  | 261 | int PointsOnBoundaryCount; | 
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|  | 262 | int LinesOnBoundaryCount; | 
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|  | 263 | int TrianglesOnBoundaryCount; | 
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|  | 264 |  | 
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| [5c7bf8] | 265 | // PointCloud implementation for PointsOnBoundary | 
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|  | 266 | virtual Vector *GetCenter(ofstream *out); | 
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|  | 267 | virtual TesselPoint *GetPoint(); | 
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|  | 268 | virtual TesselPoint *GetTerminalPoint(); | 
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|  | 269 | virtual void GoToNext(); | 
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|  | 270 | virtual void GoToPrevious(); | 
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|  | 271 | virtual void GoToFirst(); | 
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|  | 272 | virtual void GoToLast(); | 
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|  | 273 | virtual bool IsEmpty(); | 
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|  | 274 | virtual bool IsEnd(); | 
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|  | 275 |  | 
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| [357fba] | 276 | class BoundaryPointSet *BPS[2]; | 
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|  | 277 | class BoundaryLineSet *BLS[3]; | 
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|  | 278 | class BoundaryTriangleSet *BTS; | 
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| [57066a] | 279 | class BoundaryTriangleSet *LastTriangle; | 
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|  | 280 | int TriangleFilesWritten; | 
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| [5c7bf8] | 281 |  | 
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| [08ef35] | 282 | private: | 
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|  | 283 | class BoundaryPointSet *TPS[3]; //this is a Storage for pointers to triangle points, this and BPS[2] needed due to AddLine restrictions | 
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|  | 284 |  | 
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| [5c7bf8] | 285 | PointMap::iterator InternalPointer; | 
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| [357fba] | 286 | }; | 
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|  | 287 |  | 
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|  | 288 |  | 
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|  | 289 | #endif /* TESSELATION_HPP_ */ | 
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