source: src/memoryallocator.cpp@ 15b670

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Last change on this file since 15b670 was 1024cb, checked in by Frederik Heber <heber@…>, 15 years ago

Merge commit 'jupiter/MoleculeStartEndSwitch' into CommandLineActionMapping

Conflicts:

molecuilder/src/Makefile.am
molecuilder/src/builder.cpp
molecuilder/src/config.cpp
molecuilder/src/helpers.hpp
molecuilder/src/molecule.cpp
molecuilder/src/molecule_dynamics.cpp
molecuilder/src/molecule_fragmentation.cpp
molecuilder/src/molecule_geometry.cpp
molecuilder/src/molecule_graph.cpp
molecuilder/src/moleculelist.cpp
molecuilder/src/unittests/AnalysisCorrelationToPointUnitTest.cpp
molecuilder/src/unittests/listofbondsunittest.cpp

Integration of MoleculeStartEndSwitch had the following consequences:

  • no more AtomCount -> getAtomCount()
  • no more start/end -> begin(), end() and iterator
  • no more decent ordering in atomic ids (hence, Simple_configuration/8 and Domain/5, Domain/6 now check by comparing sorted xyz, not confs)

There is still a huge problem with bonds. One test runs into an endless loop.

Signed-off-by: Frederik Heber <heber@…>
  • Property mode set to 100644
File size: 955 bytes
Line 
1/*
2 * memoryallocator.cpp
3 *
4 * Created on: May 31, 2010
5 * Author: heber
6 */
7
8using namespace std;
9
10#include "memoryallocator.hpp"
11
12/** Allocates a memory range using malloc().
13 * Prints the provided error message in case of a failure.
14 *
15 * \param number of memory slices of type X to allocate
16 * \param failure message which is printed if the allocation fails
17 * \return pointer to the allocated memory range, will be NULL if a failure occurred
18 */
19template <> char* Malloc<char>(size_t size, const char* output)
20{
21 char* buffer = NULL;
22 buffer = (char*) malloc(sizeof(char) * (size + 1));
23 for (size_t i = size; i--;)
24 buffer[i] = (i % 2 == 0) ? 'p': 'c';
25 buffer[size] = '\0';
26
27 if (buffer != NULL) {
28 //MemoryUsageObserver::getInstance()->addMemory(buffer, size);
29 } else {
30 Log() << Verbose(0) << "Malloc for datatype " << typeid(char).name()
31 << " failed - pointer is NULL: " << output << endl;
32 }
33
34 return buffer;
35};
36
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