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source: src/elements.db@ 5f612ee

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Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable

Last change on this file since 5f612ee was 6ac7ee, checked in by Frederik Heber <heber@…>, 16 years ago

Merge branch 'ConcaveHull' of ../espack2 into ConcaveHull

Conflicts:

molecuilder/src/boundary.cpp
molecuilder/src/boundary.hpp
molecuilder/src/builder.cpp
molecuilder/src/linkedcell.cpp
molecuilder/src/linkedcell.hpp
molecuilder/src/vector.cpp
molecuilder/src/vector.hpp
util/src/NanoCreator.c

Basically, this resulted from a lot of conversions two from spaces to one tab, which is my standard indentation. The mess was caused by eclipse auto-indenting. And in espack2:ConcaveHull was the new stuff, so all from ConcaveHull was replaced in case of doubt.
Additionally, vector had ofstream << operator instead ostream << ...

Property mode set to 100755

File size: 4.4 KB

Line
1	# Covalent radius of each element in Angstroem from CSD (binding is: [Rcov(A)+Rcov(B)-t,Rcov(A)+Rcov(B)+t] with t = 0.4A
2	#Element Name Symbol Period Group Block Atomic Number AtomicWeight Covalent Radius vdW Radius
3	Hydrogen H 1 1 s 1 1.008 0.23 1.09
4	Helium He 1 18 p 2 4.003 1.50 1.40
5	Lithium Li 2 1 s 3 6.941 0.68 1.82
6	Beryllium Be 2 2 s 4 9.012 0.35 2.00
7	Boron B 2 13 p 5 10.811 0.83 2.00
8	Carbon C 2 14 p 6 12.011 0.68 1.70
9	Nitrogen N 2 15 p 7 14.007 0.68 1.55
10	Oxygen O 2 16 p 8 15.999 0.68 1.52
11	Fluorine F 2 17 p 9 18.998 0.64 1.47
12	Neon Ne 2 18 p 10 20.180 1.50 1.54
13	Sodium Na 3 1 s 11 22.991 0.97 2.27
14	Magnesium Mg 3 2 s 12 24.305 1.10 1.73
15	Aluminium Al 3 13 p 13 26.982 1.35 2.00
16	Silicon Si 3 14 p 14 28.086 1.20 2.10
17	Phosphorus P 3 15 p 15 30.974 1.05 1.80
18	Sulphur S 3 16 p 16 32.066 1.02 1.80
19	Chlorine Cl 3 17 p 17 35.453 0.99 1.75
20	Argon Ar 3 18 p 18 39.948 1.51 1.88
21	Potassium K 4 1 s 19 39.098 1.33 2.75
22	Calcium Ca 4 2 s 20 40.078 0.99 2.00
23	Scandium Sc 4 3 d 21 44.956 1.44 2.00
24	Titanium Ti 4 4 d 22 47.867 1.47 2.00
25	Vanadium V 4 5 d 23 50.942 1.33 2.00
26	Chromium Cr 4 6 d 24 51.996 1.35 2.00
27	Manganese Mn 4 7 d 25 54.938 1.35 2.00
28	Iron Fe 4 8 d 26 55.845 1.34 2.00
29	Cobalt Co 4 9 d 27 58.933 1.33 2.00
30	Nickel Ni 4 10 d 28 58.693 1.50 1.63
31	Copper Cu 4 11 d 29 63.546 1.52 1.40
32	Zinc Zn 4 12 d 30 65.390 1.45 1.39
33	Gallium Ga 4 13 p 31 69.723 1.22 1.87
34	Germanium Ge 4 14 p 32 72.610 1.17 2.00
35	Arsenic As 4 15 p 33 74.922 1.21 1.85
36	Selenium Se 4 16 p 34 78.960 1.22 1.90
37	Bromine Br 4 17 p 35 79.904 1.21 1.85
38	Krypton Kr 4 18 p 36 83.800 1.50 2.02
39	Rubidium Rb 5 1 s 37 85.468 1.47 2.00
40	Strontium Sr 5 2 s 38 87.620 1.12 2.00
41	Yttrium Y 5 3 d 39 88.906 1.78 2.00
42	Zirconium Zr 5 4 d 40 91.224 1.56 2.00
43	Niobium Nb 5 5 d 41 92.906 1.48 2.00
44	Molybdenum Mo 5 6 d 42 95.940 1.47 2.00
45	Technetium Tc 5 7 d 43 98 1.35 2.00
46	Ruthenium Ru 5 8 d 44 101.070 1.40 2.00
47	Rhodium Rh 5 9 d 45 102.906 1.45 2.00
48	Palladium Pd 5 10 d 46 106.420 1.50 1.63
49	Silver Ag 5 11 d 47 107.868 1.59 1.72
50	Cadmium Cd 5 12 d 48 112.411 1.69 1.58
51	Indium In 5 13 p 49 114.818 1.63 1.93
52	Tin Sn 5 14 p 50 118.71 1.46 2.17
53	Antimony Sb 5 15 p 51 121.760 1.46 2.00
54	Tellurium Te 5 16 p 52 127.600 1.47 2.06
55	Iodine I 5 17 p 53 126.904 1.40 1.98
56	Xenon Xe 5 18 p 54 131.290 1.50 2.16
57	Caesium Cs 6 1 s 55 132.905 1.67 2.00
58	Barium Ba 6 2 s 56 137.327 1.34 2.00
59	Lutetium Lu 6 3 d 71 174.967 1.72 2.00
60	Hafnium Hf 6 4 d 72 178.490 1.57 2.00
61	Tantalum Ta 6 5 d 73 180.948 1.43 2.00
62	Tungsten W 6 6 d 74 183.840 1.37 2.00
63	Rhenium Re 6 7 d 75 186.207 1.35 2.00
64	Osmium Os 6 8 d 76 190.230 1.37 2.00
65	Iridium Ir 6 9 d 77 192.217 1.32 2.00
66	Platinum Pt 6 10 d 78 195.078 1.50 1.72
67	Gold Au 6 11 d 79 196.967 1.50 1.66
68	Mercury Hg 6 12 d 80 200.590 1.70 1.55
69	Thallium Tl 6 13 p 81 204.383 1.55 1.96
70	Lead Pb 6 14 p 82 207.200 1.54 2.02
71	Bismuth Bi 6 15 p 83 208.980 1.54 2.00
72	Polonium Po 6 16 p 84 210 1.68 2.00
73	Astatine At 6 17 p 85 210 1.21 2.00
74	Radon Rn 6 18 p 86 222 1.50 2.00
75	Cerium Ce 6Lan 19 f 58 140.116 1.83 2.00
76	Dysprosium Dy 6Lan 19 f 66 162.500 1.75 2.00
77	Erbium Er 6Lan 19 f 68 167.260 1.73 2.00
78	Europium Eu 6Lan 19 f 63 151.964 1.99 2.00
79	Gadolinium Gd 6Lan 19 f 64 157.250 1.79 2.00
80	Holmium Ho 6Lan 19 f 67 164.930 1.74 2.00
81	Lanthanum La 6Lan 19 f 57 138.906 1.87 2.00
82	Neodymium Nd 6Lan 19 f 60 144.240 1.81 2.00
83	Promethium Pm 6Lan 19 f 61 145 1.80 2.00
84	Praseodymium Pr 6Lan 19 f 59 140.908 1.82 2.00
85	Samarium Sm 6Lan 19 f 62 150.360 1.80 2.00
86	Terbium Tb 6Lan 19 f 65 158.925 1.76 2.00
87	Thulium Tm 6Lan 19 f 69 168.934 1.72 2.00
88	Ytterbium Yb 6Lan 19 f 70 173.040 1.94 2.00
89	Francium Fr 7 1 s 87 223 1.50 2.00
90	Radium Ra 7 2 s 88 226 1.90 2.00
91	Lawrencium Lr 7 3 d 103 262 1.50 2.00
92	Rutherfordium Rf 7 4 d 104 261 1.50 2.00
93	Dubnium Db 7 5 d 105 262 1.50 2.00
94	Seaborgium Sg 7 6 d 106 266 1.50 2.00
95	Bohrium Bh 7 7 d 107 264 1.50 2.00
96	Hassium Hs 7 8 d 108 269 1.50 2.00
97	Meitnerium Mt 7 9 d 109 268 1.50 2.00
98	Darmstadtium Ds 7 10 d 110 271 1.50 2.00
99	Actinium Ac 7Act 20 f 89 227 1.88 2.00
100	Americium Am 7Act 20 f 95 243 1.51 2.00
101	Berkelium Bk 7Act 20 f 97 247 1.54 2.00
102	Californium Cf 7Act 20 f 98 251 1.83 2.00
103	Curium Cm 7Act 20 f 96 247 0.99 2.00
104	Einsteinium Es 7Act 20 f 99 252 1.50 2.00
105	Fermium Fm 7Act 20 f 100 257 1.50 2.00
106	Mendelevium Md 7Act 20 f 101 258 1.50 2.00
107	Nobelium No 7Act 20 f 102 259 1.50 2.00
108	Neptunium Np 7Act 20 f 93 237 1.55 2.00
109	Protactinium Pa 7Act 20 f 91 231.036 1.61 2.00
110	Plutonium Pu 7Act 20 f 94 244 1.53 2.00
111	Thorium Th 7Act 20 f 90 232.038 1.79 2.00
112	Uranium U 7Act 20 f 92 238.029 1.58 1.86

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