source: src/element.hpp@ a0064e

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Last change on this file since a0064e was e4fe8d, checked in by Frederik Heber <heber@…>, 14 years ago

Moved defs.?pp to subdir (and library) Helpers.

  • hence, include had to be changed to Helpers/defs.hpp
  • and Makefile.am and Helpers/Makefile.am adapted
  • also in LinearAlgebra where MYEPSILON appears we have added the above include
  • Property mode set to 100644
File size: 2.5 KB
Line 
1/*
2 * element.hpp
3 *
4 * Created on: Aug 3, 2009
5 * Author: heber
6 */
7
8#ifndef ELEMENT_HPP_
9#define ELEMENT_HPP_
10
11/*********************************************** includes ***********************************/
12
13// include config.h
14#ifdef HAVE_CONFIG_H
15#include <config.h>
16#endif
17
18#include <iosfwd>
19#include <string>
20
21#include "Helpers/defs.hpp"
22#include "types.hpp"
23
24class periodentafel;
25
26/********************************************** declarations *******************************/
27
28/** Chemical element.
29 * Class incorporates data for a certain chemical element to be referenced from atom class.
30 */
31class element {
32 friend class periodentafel;
33 public:
34 element();
35 element(const element&);
36 ~element();
37
38 element &operator=(const element&);
39
40 // accessor functions
41 atomicNumber_t getNumber() const;
42 double getMass() const;
43 double getCovalentRadius() const;
44 double getVanDerWaalsRadius() const;
45 int getAtomicNumber() const;
46 double getValence() const;
47 int getNoValenceOrbitals() const;
48 double getHBondDistance(const int i) const;
49 double getHBondAngle(const int i) const;
50
51 std::string &getSymbol();
52 const std::string &getSymbol() const;
53 void setSymbol(const std::string &temp);
54
55 std::string &getName();
56 const std::string &getName() const;
57 void setName(const std::string &temp);
58
59 //> print element entries to screen
60 bool Output(std::ostream * const out) const;
61 bool Checkout(std::ostream * const out, const int No, const int NoOfAtoms) const;
62
63 private:
64 double mass; //!< mass in g/mol
65 double CovalentRadius; //!< covalent radius
66 double VanDerWaalsRadius; //!< can-der-Waals radius
67 int Z; //!< atomic number
68 std::string period; //!< period: n quantum number
69 std::string group; //!< group: l quantum number
70 std::string block; //!< block: l quantum number
71 double Valence; //!< number of valence electrons for this element
72 int NoValenceOrbitals; //!< number of valence orbitals, used for determining bond degree in molecule::CreateConnectmatrix()
73 double HBondDistance[NDIM]; //!< distance in Angstrom of this element to hydrogen (for single, double and triple bonds)
74 double HBondAngle[NDIM]; //!< typical angle for one, two, three bonded hydrogen (in degrees)
75
76 std::string name; //!< atom name, i.e. "Hydrogen"
77 std::string symbol; //!< short form of the atom, i.e. "H"
78};
79
80std::ostream &operator<<(std::ostream&,const element&);
81
82#endif /* ELEMENT_HPP_ */
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