| 1 | /*
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| 2 | * element.hpp
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| 3 | *
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| 4 | * Created on: Aug 3, 2009
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| 5 | * Author: heber
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| 6 | */
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| 7 |
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| 8 | #ifndef ELEMENT_HPP_
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| 9 | #define ELEMENT_HPP_
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| 10 |
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| 11 | /*********************************************** includes ***********************************/
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| 12 |
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| 13 | // include config.h
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| 14 | #ifdef HAVE_CONFIG_H
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| 15 | #include <config.h>
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| 16 | #endif
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| 17 |
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| 18 | #include <iosfwd>
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| 19 | #include <string>
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| 20 |
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| 21 | #include "Helpers/defs.hpp"
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| 22 | #include "types.hpp"
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| 23 |
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| 24 | class periodentafel;
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| 25 |
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| 26 | /********************************************** declarations *******************************/
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| 27 |
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| 28 | /** Chemical element.
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| 29 | * Class incorporates data for a certain chemical element to be referenced from atom class.
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| 30 | */
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| 31 | class element {
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| 32 | friend class periodentafel;
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| 33 | public:
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| 34 | element();
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| 35 | element(const element&);
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| 36 | ~element();
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| 37 |
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| 38 | element &operator=(const element&);
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| 39 |
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| 40 | // accessor functions
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| 41 | atomicNumber_t getNumber() const;
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| 42 | double getMass() const;
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| 43 | double getCovalentRadius() const;
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| 44 | double getElectronegativity() const;
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| 45 | double getVanDerWaalsRadius() const;
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| 46 | int getAtomicNumber() const;
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| 47 | double getValence() const;
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| 48 | int getNoValenceOrbitals() const;
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| 49 | double getHBondDistance(const int i) const;
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| 50 | double getHBondAngle(const int i) const;
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| 51 |
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| 52 | std::string &getSymbol();
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| 53 | const std::string &getSymbol() const;
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| 54 | void setSymbol(const std::string &temp);
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| 55 |
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| 56 | std::string &getName();
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| 57 | const std::string &getName() const;
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| 58 | void setName(const std::string &temp);
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| 59 |
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| 60 | //> print element entries to screen
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| 61 | bool Output(std::ostream * const out) const;
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| 62 | bool Checkout(std::ostream * const out, const int No, const int NoOfAtoms) const;
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| 63 |
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| 64 | private:
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| 65 | double mass; //!< mass in g/mol
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| 66 | double CovalentRadius; //!< covalent radius
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| 67 | double Electronegativity; //!< electronegativity in Pauling units
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| 68 | double VanDerWaalsRadius; //!< can-der-Waals radius
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| 69 | int Z; //!< atomic number
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| 70 | std::string period; //!< period: n quantum number
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| 71 | std::string group; //!< group: l quantum number
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| 72 | std::string block; //!< block: l quantum number
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| 73 | double Valence; //!< number of valence electrons for this element
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| 74 | int NoValenceOrbitals; //!< number of valence orbitals, used for determining bond degree in molecule::CreateConnectmatrix()
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| 75 | double HBondDistance[NDIM]; //!< distance in Angstrom of this element to hydrogen (for single, double and triple bonds)
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| 76 | double HBondAngle[NDIM]; //!< typical angle for one, two, three bonded hydrogen (in degrees)
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| 77 |
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| 78 | std::string name; //!< atom name, i.e. "Hydrogen"
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| 79 | std::string symbol; //!< short form of the atom, i.e. "H"
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| 80 | };
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| 81 |
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| 82 | std::ostream &operator<<(std::ostream&,const element&);
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| 83 |
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| 84 | #endif /* ELEMENT_HPP_ */
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