AutomationFragmentation_failures
        Candidate_v1.6.1
        Candidate_v1.7.0
        ChemicalSpaceEvaluator
        Enhanced_StructuralOptimization_continued
        Exclude_Hydrogens_annealWithBondGraph
        ForceAnnealing_with_BondGraph
        ForceAnnealing_with_BondGraph_contraction-expansion
        Gui_displays_atomic_force_velocity
        JobMarket_RobustOnKillsSegFaults
        PythonUI_with_named_parameters
        StoppableMakroAction
        TremoloParser_IncreasedPrecision
        stable
      
      
        
          | Last change
 on this file since 1e58bb was             caece4, checked in by Frederik Heber <heber@…>, 11 years ago | 
        
          | 
Enhanced documentation significantly.
 went through all of the constructs and updated each.
enhanced documentation ofr Fragmentation::FragmentMolecule().
 | 
        
          | 
              
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 set to                 100644 | 
        
          | File size:
            1.4 KB | 
      
      
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| 1 | /* | 
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| 2 | * Project: MoleCuilder | 
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| 3 | * Description: creates and alters molecular systems | 
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| 4 | * Copyright (C)  2010 University of Bonn. All rights reserved. | 
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| 5 | * Please see the LICENSE file or "Copyright notice" in builder.cpp for details. | 
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| 6 | */ | 
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| 7 |  | 
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| 8 | /** | 
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| 9 | * \file launch.dox | 
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| 10 | * | 
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| 11 | * Created on: Oct 28, 2011 | 
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| 12 | *    Author: heber | 
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| 13 | */ | 
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| 14 |  | 
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| 15 | /** | 
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| 16 | * \page launch Running the code | 
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| 17 | * | 
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| 18 | *  Before you have done | 
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| 19 | *  \code | 
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| 20 | *  make install | 
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| 21 | *  \endcode | 
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| 22 | *  The executables are in the \b src folder of your build directory. There are | 
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| 23 | *  two variants: | 
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| 24 | *  - molecuilder (contains command line and text interface) | 
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| 25 | *  - molecuildergui (contains graphical user interface) | 
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| 26 | *  There is one more variant, a python module, residing in the libs folder: | 
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| 27 | *  - pyMoleCuilder | 
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| 28 | * | 
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| 29 | *  The programs can be executed by running: | 
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| 30 | *  - Text menu: Launching molecuilder with no options always gives the text menu. | 
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| 31 | *    \code ./molecuilder \endcode | 
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| 32 | *  - Command line menu: Depends on what you want, but an exemplary call is | 
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| 33 | *    \code ./molecuilder -i test.xyz -o tremolo xyz -v 3 --add-atom H --position "0,0,0"\endcode | 
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| 34 | *  - Graphical menu | 
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| 35 | *    \code ./molecuildergui \endcode | 
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| 36 | *  - Python interface | 
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| 37 | *    \code PYTHONPATH="<installpath>/libs" /usr/bin/python \endcode | 
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| 38 | *    Then try, | 
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| 39 | *    \code | 
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| 40 | *      import pyMoleCuilder as mol | 
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| 41 | *      help(mol) | 
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| 42 | *    \endcode | 
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| 43 | * | 
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| 44 | * The user interface are explained in greater detail in \ref userinterfaces. | 
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| 45 | * | 
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| 46 | * | 
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| 47 | * \date 2014-03-10 | 
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| 48 | * | 
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| 49 | */ | 
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