source: src/documentation/constructs/actions.dox@ cae614

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since cae614 was caece4, checked in by Frederik Heber <heber@…>, 11 years ago

Enhanced documentation significantly.

  • went through all of the constructs and updated each.
  • enhanced documentation ofr Fragmentation::FragmentMolecule().
  • Property mode set to 100644
File size: 3.7 KB
Line 
1/*
2 * Project: MoleCuilder
3 * Description: creates and alters molecular systems
4 * Copyright (C) 2010 University of Bonn. All rights reserved.
5 * Copyright (C) 2014 Frederik Heber. All rights reserved.
6 * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
7 */
8
9/**
10 * \file actions.dox
11 *
12 * Created on: Oct 28, 2011
13 * Author: heber
14 */
15
16/** \page actions Actions
17 *
18 * \link MoleCuilder::Action Actions \endlink are Command patterns
19 * (http://en.wikipedia.org/wiki/Command_pattern)
20 * to allow for undoing and redoing. Each specific Action derives from this
21 * class to implement a certain functionality. There is a lot of preprocessor
22 * magic implemented for making this as easy as possible. In effect you only
23 * have to create three files of which only one actually contains more than a
24 * few lines, namely the code of the Action itself.
25 * Each Action also derives a specific ActionState and ActionParameters for
26 * containing the undo/redo state information and the parameters steering what
27 * the Action does.
28 *
29 * Each Action has thus three types of functionality: do, undo, and redo. And
30 * each action has a unique \a token: a name without white space that is
31 * descriptive.
32 *
33 * The ActionRegistry contains a prototype of each Action under its token.
34 * If an Action is requested via its known token from the ActionQueue
35 * (that contains the ActionRegistry), this prototype is cloned and added to the
36 * queue.
37 *
38 * Each Action can contain multiple \ref parameters in its specific
39 * ActionParameters structure that represent the options. Executing call() first
40 * fills a dialog with \ref queries, one for each option. The UI then tries to
41 * obtain the values from the user. Depending on the type of the UI in use that
42 * could mean parsing stored command line parameters or displaying a real dialog
43 * box with widgets.
44 *
45 * Also there is a regression test (\ref regression-test) for each Action to
46 * check that it always behaves the same no matter how much the code
47 * implementing actually has changed. In most cases also for testing undo and
48 * redo.
49 *
50 * \section actions-add To add a new action ...
51 *
52 * The following steps have to be done for adding a new action:
53 * -# Create three new files .cpp, .def, and .hpp
54 * -# Add the files to \b src/Actions/Makefile.am.
55 * -# Add the name of the Action to \b src/Actions/GlobalListOfActions.hpp
56 * such that the ActionRegistry knows about it and can instantiate a
57 * prototype.
58 *
59 * \section actions-undo-redo Undoing and Redoing actions ...
60 *
61 * The central points of Actions is that they can be undone and redone. This
62 * has to be implemented in two more functions beside the "do" in performCall().
63 *
64 * Note that undoing means to get everything back to its original state and by whatever
65 * means seem appropriate, e.g. remvoing all just inserted atoms.
66 * To make this more elaborate it is usually very useful to store extra information
67 * in the Action's state such that undo and redo can be accomplished more quickly.
68 * E.g. if your Action creates some new atoms, store their info as \ref AtomicInfo.
69 * Then, undo can simply delete the newly created atoms and redo can quickly re-
70 * create them in the state they have been before. Types required for storage are
71 * contained in the Action's state and are filled during performCall(). Undo and
72 * redo both get access to this state and may use the information as described.
73 *
74 * Have a look at \ref UndoRedoHelpers.hpp for some helper functions on this.
75 *
76 * \section actions-further Further information
77 *
78 * If you want know:
79 * -# how the code knows about the valid tokens for actions and options and how
80 * they are constructed, see \ref MoleCuilder::Action .
81 *
82 *
83 * \date 2014-03-10
84 *
85 */
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