source: src/defs.hpp@ 110ceb

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Last change on this file since 110ceb was 110ceb, checked in by Frederik Heber <heber@…>, 17 years ago

VolumeOfConvexEnvelope: Works!

VolumeOfConvexEnvelope has been analysed into various smaller functions and approach is working.
two new files: boundary.?pp
various new functions:
class Tesselation with AddPoint(), TesselateOnBoundary() and GuessStartingTriangle() does the actual tesselation
CreateClustersinWater() will create the repetition of the cluster with correct spacing (unfinished).
GetDiametersOfCluster() calculate the greatest diameter in projection per axis
GetBoundaryPoints() gets the boundary on the convex envelope by projection for a molecular cluster
GetCommonEndpoint() finds the endpoint two lines are sharing

  • Property mode set to 100644
File size: 3.5 KB
Line 
1/** \file defs.hpp
2 *
3 * Constant definitons and enumerations.
4 *
5 */
6
7#ifndef DEFS_HPP_
8#define DEFS_HPP_
9
10using namespace std;
11
12#define MYEPSILON 1e-13 //!< machine epsilon precision
13#define NDIM 3 //!< number of spatial dimensions
14#define MAX_ELEMENTS 128 //!< maximum number of elements for certain lookup tables
15#define AtomicLengthToAngstroem 0.52917721 //!< conversion factor from atomic length/bohrradius to angstroem
16#define BONDTHRESHOLD 0.5 //!< CSD threshold in bond check which is the width of the interval whose center is the sum of the covalent radii
17
18#define VERSIONSTRING "v1.0"
19
20#define LocalPath "./"
21
22//enum BondOrderScheme { NoScheme, BottomUp, TopDown, ANOVA, Combined }; //!< Fragmentation scheme used in BOSS
23
24enum EdgeType { Undetermined, TreeEdge, BackEdge }; //!< edge type in a graph after Depth-First-Search analysis.
25
26enum Shading { white, lightgray, darkgray, black }; //!< color in Breadth-First-Search analysis
27
28//enum CutCyclicBond { KeepBond, SaturateBond }; //!< Saturation scheme either atom- or bondwise
29
30// Specifting whether a value in the parameter file must be specified or is optional
31enum necessity { optional, //!< parameter is optional, if not given sensible value is chosen
32 critical //!< parameter must be given or programme won't initiate
33 };
34
35// Specifying the status of the on command line given config file
36enum ConfigStatus { absent, empty, present };
37
38// Specifying the cast type to be read of a parameter, see ParseForParameter()
39enum value_type { string_type, double_type, int_type, row_int, row_double, grid, lower_trigrid, upper_trigrid};
40
41// maximum length of any char array
42#define MAXSTRINGSIZE 255
43
44// various standard filenames
45#define DEFAULTCONFIG "main_pcp_linux" //!< default filename of config file
46#define CONVEXENVELOPE "ConvexEnvelope.dat" //!< default filename of convex envelope tecplot data file
47#define KEYSETFILE "KeySets.dat" //!< default filename of BOSSANOVA key sets file
48#define ADJACENCYFILE "Adjacency.dat" //!< default filename of BOSSANOVA adjacancy file
49#define TEFACTORSFILE "TE-Factors.dat" //!< default filename of BOSSANOVA total energy factors file
50#define FORCESFILE "Forces-Factors.dat" //!< default filename of BOSSANOVA force factors file
51#define ORDERATSITEFILE "OrderAtSite.dat" //!< default filename of BOSSANOVA Bond Order at each atom file
52#define ENERGYPERFRAGMENT "EnergyPerFragment" //!< default filename of BOSSANOVA Energy contribution Per Fragment file
53#define FRAGMENTPREFIX "BondFragment" //!< default filename prefix of BOSSANOVA fragment config and directories
54#define STANDARDCONFIG "unknown.conf" //!< default filename of standard config file
55#define STANDARDELEMENTSDB "elements.db" //!< default filename of elements data base with masses, Z, VanDerWaals radii, ...
56#define STANDARDVALENCEDB "valence.db" //!< default filename of valence number per element database
57#define STANDARDORBITALDB "orbitals.db" //!< default filename of orbitals per element database
58#define STANDARDHBONDDISTANCEDB "Hbonddistance.db" //!< default filename of typial bond distance to hydrogen database
59#define STANDARDHBONDANGLEDB "Hbondangle.db" //!< default filename of typial bond angle to hydrogen database
60
61// some values
62#define SOLVENTDENSITY_A 0.6022142
63#define SOLVENTDENSITY_a0 0.089238936
64
65
66#define UPDATECOUNT 10 //!< update ten sites per BOSSANOVA interval
67
68#endif /*DEFS_HPP_*/
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